RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 LDHCP07864 332 aa9.47□□□□□ -0.89
CTNND1-230ENST00000532245 ZNF444Q8N0Y2 327 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-230ENST00000532245 RBM17Q96I25 401 aaKnown RBP9.47□□□□□ -0.89
CTNND1-230ENST00000532245 FAM89AQ96GI7 184 aa9.47□□□□□ -0.89
CTNND1-230ENST00000532245 FEZ1Q99689 392 aa9.47□□□□□ -0.89
CTNND1-230ENST00000532245 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-230ENST00000532245 DDX49Q9Y6V7 483 aaKnown RBP9.47□□□□□ -0.89
CTNND1-230ENST00000532245 HCLS1P14317 486 aaPredicted RBP9.46□□□□□ -0.89
CTNND1-230ENST00000532245 CHMP4BP1P59074 171 aa9.46□□□□□ -0.89
CTNND1-230ENST00000532245 MEIS3Q99687 375 aa9.46□□□□□ -0.89
CTNND1-230ENST00000532245 JAG2Q9Y219 1238 aa9.46□□□□□ -0.89
CTNND1-230ENST00000532245 KDM5CP41229 1560 aa9.46□□□□□ -0.89
CTNND1-230ENST00000532245 BAG3O95817 575 aa9.46□□□□□ -0.89
CTNND1-230ENST00000532245 UNC5CLQ8IV45 518 aa9.46□□□□□ -0.89
CTNND1-230ENST00000532245 VEZTQ9HBM0 779 aa9.46□□□□□ -0.89
CTNND1-230ENST00000532245 SPTY2D1Q68D10 685 aaPredicted RBP9.46□□□□□ -0.9
CTNND1-230ENST00000532245 SEPT12Q8IYM1 358 aa9.46□□□□□ -0.9
CTNND1-230ENST00000532245 JAKMIP1Q96N16 626 aaKnown RBP9.46□□□□□ -0.9
CTNND1-230ENST00000532245 GPR162Q16538 588 aa9.46□□□□□ -0.9
CTNND1-230ENST00000532245 ATP2B3Q16720 1220 aa9.46□□□□□ -0.9
CTNND1-230ENST00000532245 BLOC1S2Q6QNY1 142 aa9.46□□□□□ -0.9
CTNND1-230ENST00000532245 ZNF804AQ7Z570 1209 aa9.46□□□□□ -0.9
CTNND1-230ENST00000532245 CCDC96Q2M329 555 aa9.45□□□□□ -0.9
CTNND1-230ENST00000532245 FAM196AQ6ZSG2 479 aa9.45□□□□□ -0.9
CTNND1-230ENST00000532245 PARD3Q8TEW0 1356 aa9.45□□□□□ -0.9
CTNND1-230ENST00000532245 H0YIN7 160 aa9.45□□□□□ -0.9
CTNND1-230ENST00000532245 TPM2P07951 284 aa9.45□□□□□ -0.9
CTNND1-230ENST00000532245 CDK5RAP3Q96JB5 506 aa9.45□□□□□ -0.9
CTNND1-230ENST00000532245 PCMTD1Q96MG8 357 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-230ENST00000532245 AFF2P51816 1311 aa9.45□□□□□ -0.9
CTNND1-230ENST00000532245 BECN2A8MW95 431 aa9.45□□□□□ -0.9
CTNND1-230ENST00000532245 ALDH1L1O75891 902 aa9.45□□□□□ -0.9
CTNND1-230ENST00000532245 LMOD1P29536 600 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-230ENST00000532245 TSHZ3Q63HK5 1081 aa9.45□□□□□ -0.9
CTNND1-230ENST00000532245 R3HCC1Q9Y3T6 440 aaKnown RBP9.45□□□□□ -0.9
CTNND1-230ENST00000532245 PICALMQ13492 652 aa9.45□□□□□ -0.9
CTNND1-230ENST00000532245 LINS1Q8NG48 757 aa9.45□□□□□ -0.9
CTNND1-230ENST00000532245 TTF1Q15361 905 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-230ENST00000532245 ZNF496Q96IT1 587 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-230ENST00000532245 IBSPP21815 317 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-230ENST00000532245 ZNF76P36508 570 aa9.44□□□□□ -0.9
CTNND1-230ENST00000532245 CEBPZQ03701 1054 aaKnown RBP9.44□□□□□ -0.9
CTNND1-230ENST00000532245 DDX21Q9NR30 783 aaKnown RBP eCLIP9.44□□□□□ -0.94e-6■□□□□ 11.2
CTNND1-230ENST00000532245 HOOK1Q9UJC3 728 aaKnown RBP9.44□□□□□ -0.9
CTNND1-230ENST00000532245 PA2G4Q9UQ80 394 aaKnown RBP9.44□□□□□ -0.9
CTNND1-230ENST00000532245 A2ML1A8K2U0 1454 aa9.44□□□□□ -0.9
CTNND1-230ENST00000532245 PTPRTO14522 1441 aa9.44□□□□□ -0.9
CTNND1-230ENST00000532245 HLA-DOAP06340 250 aa9.44□□□□□ -0.9
CTNND1-230ENST00000532245 PHKG2P15735 406 aa9.44□□□□□ -0.9
CTNND1-230ENST00000532245 KCNQ4P56696 695 aa9.44□□□□□ -0.9
CTNND1-230ENST00000532245 MRPL50Q8N5N7 158 aaKnown RBP9.44□□□□□ -0.9
CTNND1-230ENST00000532245 EYA3Q99504 573 aa9.44□□□□□ -0.9
CTNND1-230ENST00000532245 TSHZ2Q9NRE2 1034 aa9.44□□□□□ -0.9
CTNND1-230ENST00000532245 PER1O15534 1290 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-230ENST00000532245 UQCRFS1P1P0C7P4 283 aa9.43□□□□□ -0.9
CTNND1-230ENST00000532245 CABP5Q9NP86 173 aa9.43□□□□□ -0.9
CTNND1-230ENST00000532245 BCS1LQ9Y276 419 aa9.43□□□□□ -0.9
CTNND1-230ENST00000532245 PRR36Q9H6K5 1346 aa9.43□□□□□ -0.9
CTNND1-230ENST00000532245 ERVV-2B6SEH9 535 aa9.43□□□□□ -0.9
CTNND1-230ENST00000532245 ECM2O94769 699 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-230ENST00000532245 PRPF40BQ6NWY9 871 aaKnown RBP9.43□□□□□ -0.9
CTNND1-230ENST00000532245 CEP89Q96ST8 783 aa9.43□□□□□ -0.9
CTNND1-230ENST00000532245 CARD10Q9BWT7 1032 aa9.43□□□□□ -0.9
CTNND1-230ENST00000532245 ECHDC1Q9NTX5 307 aa9.43□□□□□ -0.9
CTNND1-230ENST00000532245 U3KPZ7 1027 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-230ENST00000532245 MAP3K4Q9Y6R4 1608 aa9.43□□□□□ -0.9
CTNND1-230ENST00000532245 GCC2Q8IWJ2 1684 aa9.43□□□□□ -0.9
CTNND1-230ENST00000532245 GOLGA6L19H0YKK7 550 aa9.43□□□□□ -0.9
CTNND1-230ENST00000532245 CCDC73Q6ZRK6 1079 aa9.43□□□□□ -0.9
CTNND1-230ENST00000532245 ARHGEF25Q86VW2 580 aa9.43□□□□□ -0.9
CTNND1-230ENST00000532245 PDRG1Q9NUG6 133 aa9.43□□□□□ -0.9
CTNND1-230ENST00000532245 KRT18P05783 430 aaKnown RBP9.43□□□□□ -0.9
CTNND1-230ENST00000532245 GSTO1P78417 241 aa9.43□□□□□ -0.9
CTNND1-230ENST00000532245 DDX11L8A8MPP1 907 aa9.42□□□□□ -0.9
CTNND1-230ENST00000532245 ANKRD1Q15327 319 aa9.42□□□□□ -0.9
CTNND1-230ENST00000532245 UFL1O94874 794 aa9.42□□□□□ -0.9
CTNND1-230ENST00000532245 CYP7A1P22680 504 aa9.42□□□□□ -0.9
CTNND1-230ENST00000532245 MSNP26038 577 aaKnown RBP9.42□□□□□ -0.9
CTNND1-230ENST00000532245 HSPA1LP34931 641 aa9.42□□□□□ -0.9
CTNND1-230ENST00000532245 PARP10Q53GL7 1025 aa9.42□□□□□ -0.9
CTNND1-230ENST00000532245 SH3TC1Q8TE82 1336 aa9.42□□□□□ -0.9
CTNND1-230ENST00000532245 ZNF213O14771 459 aa9.42□□□□□ -0.9
CTNND1-230ENST00000532245 CCDC82Q8N4S0 544 aa9.42□□□□□ -0.9
CTNND1-230ENST00000532245 PLBD2Q8NHP8 589 aa9.42□□□□□ -0.9
CTNND1-230ENST00000532245 SEC63Q9UGP8 760 aaKnown RBP9.42□□□□□ -0.9
CTNND1-230ENST00000532245 VAMP4O75379 141 aa9.42□□□□□ -0.9
CTNND1-230ENST00000532245 NF2P35240 595 aa9.42□□□□□ -0.9
CTNND1-230ENST00000532245 IL15P40933 162 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-230ENST00000532245 KRT32Q14532 448 aa9.42□□□□□ -0.9
CTNND1-230ENST00000532245 RABEP1Q15276 862 aa9.42□□□□□ -0.9
CTNND1-230ENST00000532245 TSR1Q2NL82 804 aaKnown RBP9.42□□□□□ -0.9
CTNND1-230ENST00000532245 CASTP20810 708 aaKnown RBP9.41□□□□□ -0.9
CTNND1-230ENST00000532245 IQCA1Q86XH1 822 aa9.41□□□□□ -0.9
CTNND1-230ENST00000532245 RHPN1Q8TCX5 695 aa9.41□□□□□ -0.9
CTNND1-230ENST00000532245 ZNF408Q9H9D4 720 aa9.41□□□□□ -0.9
CTNND1-230ENST00000532245 ADGRL3Q9HAR2 1447 aa9.41□□□□□ -0.9
CTNND1-230ENST00000532245 LARGE2Q8N3Y3 721 aa9.41□□□□□ -0.9
CTNND1-230ENST00000532245 CRNKL1Q9BZJ0 848 aaKnown RBP9.41□□□□□ -0.9
CTNND1-230ENST00000532245 ANKRD2Q9GZV1 360 aa9.41□□□□□ -0.9
CTNND1-230ENST00000532245 ARAP3Q8WWN8 1544 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms