RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 DOT1LQ8TEK3 1739 aa7.66□□□□□ -1.18
HMGB1P42-201ENST00000532126 C2orf72A6NCS6 295 aa7.66□□□□□ -1.18
HMGB1P42-201ENST00000532126 ERVV-2B6SEH9 535 aa7.66□□□□□ -1.18
HMGB1P42-201ENST00000532126 MS4A1P11836 297 aa7.66□□□□□ -1.18
HMGB1P42-201ENST00000532126 OSBPP22059 807 aa7.66□□□□□ -1.18
HMGB1P42-201ENST00000532126 PRKAR2BP31323 418 aa7.66□□□□□ -1.18
HMGB1P42-201ENST00000532126 CABP4P57796 275 aa7.66□□□□□ -1.18
HMGB1P42-201ENST00000532126 SMARCC1Q92922 1105 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P42-201ENST00000532126 CCNL1Q9UK58 526 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P42-201ENST00000532126 PALLDQ8WX93 1383 aa7.66□□□□□ -1.18
HMGB1P42-201ENST00000532126 RGPD3A6NKT7 1758 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P42-201ENST00000532126 KDM6AO15550 1401 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P42-201ENST00000532126 NEFMP07197 916 aa7.65□□□□□ -1.18
HMGB1P42-201ENST00000532126 KCNQ4P56696 695 aa7.65□□□□□ -1.18
HMGB1P42-201ENST00000532126 EVX2Q03828 476 aa7.65□□□□□ -1.18
HMGB1P42-201ENST00000532126 SLC15A2Q16348 729 aa7.65□□□□□ -1.18
HMGB1P42-201ENST00000532126 RGPD4Q7Z3J3 1758 aa7.65□□□□□ -1.18
HMGB1P42-201ENST00000532126 BANK1Q8NDB2 785 aa7.65□□□□□ -1.18
HMGB1P42-201ENST00000532126 GAS2L2Q8NHY3 880 aa7.65□□□□□ -1.18
HMGB1P42-201ENST00000532126 PRKRIP1Q9H875 184 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P42-201ENST00000532126 ANO8Q9HCE9 1232 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P42-201ENST00000532126 LRRC4BQ9NT99 713 aa7.65□□□□□ -1.18
HMGB1P42-201ENST00000532126 BTAF1O14981 1849 aa7.64□□□□□ -1.19
HMGB1P42-201ENST00000532126 RREB1Q92766 1687 aa7.64□□□□□ -1.19
HMGB1P42-201ENST00000532126 HMGB2P26583 209 aaKnown RBP7.64□□□□□ -1.19
HMGB1P42-201ENST00000532126 NFATC2IPQ8NCF5 419 aa7.64□□□□□ -1.19
HMGB1P42-201ENST00000532126 PHACTR3Q96KR7 559 aa7.64□□□□□ -1.19
HMGB1P42-201ENST00000532126 CALR3Q96L12 384 aaKnown RBP7.64□□□□□ -1.19
HMGB1P42-201ENST00000532126 ATG3Q9NT62 314 aa7.64□□□□□ -1.19
HMGB1P42-201ENST00000532126 ASAP1Q9ULH1 1129 aa7.64□□□□□ -1.19
HMGB1P42-201ENST00000532126 BOLA1Q9Y3E2 137 aa7.64□□□□□ -1.19
HMGB1P42-201ENST00000532126 NUP188Q5SRE5 1749 aa7.64□□□□□ -1.19
HMGB1P42-201ENST00000532126 MAP3K5Q99683 1374 aa7.63□□□□□ -1.19
HMGB1P42-201ENST00000532126 LOC102724428A0A0B4J2F2 783 aa7.63□□□□□ -1.19
HMGB1P42-201ENST00000532126 C19orf67A6NJJ6 358 aa7.63□□□□□ -1.19
HMGB1P42-201ENST00000532126 GNAT3A8MTJ3 354 aa7.63□□□□□ -1.19
HMGB1P42-201ENST00000532126 KIF3CO14782 793 aa7.63□□□□□ -1.19
HMGB1P42-201ENST00000532126 RNMTO43148 476 aaKnown RBP7.63□□□□□ -1.19
HMGB1P42-201ENST00000532126 FECHP22830 423 aa7.63□□□□□ -1.19
HMGB1P42-201ENST00000532126 PTGER2P43116 358 aa7.63□□□□□ -1.19
HMGB1P42-201ENST00000532126 SIK1P57059 783 aa7.63□□□□□ -1.19
HMGB1P42-201ENST00000532126 PDCD7Q8N8D1 485 aaKnown RBP7.63□□□□□ -1.19
HMGB1P42-201ENST00000532126 SP7Q8TDD2 431 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P42-201ENST00000532126 DDX12PQ92771 950 aa7.63□□□□□ -1.19
HMGB1P42-201ENST00000532126 PNNQ9H307 717 aaKnown RBP7.63□□□□□ -1.19
HMGB1P42-201ENST00000532126 LGR6Q9HBX8 967 aa7.63□□□□□ -1.19
HMGB1P42-201ENST00000532126 PRM3Q9NNZ6 103 aa7.63□□□□□ -1.19
HMGB1P42-201ENST00000532126 TOGARAM1Q9Y4F4 1720 aa7.63□□□□□ -1.19
HMGB1P42-201ENST00000532126 TBC1D12O60347 775 aa7.62□□□□□ -1.19
HMGB1P42-201ENST00000532126 CLCN1P35523 988 aa7.62□□□□□ -1.19
HMGB1P42-201ENST00000532126 ATP6V1AP38606 617 aa7.62□□□□□ -1.19
HMGB1P42-201ENST00000532126 WDR43Q15061 677 aaKnown RBP eCLIP7.62□□□□□ -1.19
HMGB1P42-201ENST00000532126 ZNF827Q17R98 1081 aa7.62□□□□□ -1.19
HMGB1P42-201ENST00000532126 TMEM121BQ9BXQ6 578 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P42-201ENST00000532126 SLC52A2Q9HAB3 445 aa7.62□□□□□ -1.19
HMGB1P42-201ENST00000532126 TFCP2L1Q9NZI6 479 aa7.62□□□□□ -1.19
HMGB1P42-201ENST00000532126 MAPK8IP3Q9UPT6 1336 aa7.61□□□□□ -1.19
HMGB1P42-201ENST00000532126 ANP32CO43423 234 aa7.61□□□□□ -1.19
HMGB1P42-201ENST00000532126 PTCD1O75127 700 aaKnown RBP7.61□□□□□ -1.19
HMGB1P42-201ENST00000532126 TEFQ10587 303 aa7.61□□□□□ -1.19
HMGB1P42-201ENST00000532126 SND1Q7KZF4 910 aaKnown RBP eCLIP7.61□□□□□ -1.19
HMGB1P42-201ENST00000532126 IL17REQ8NFR9 667 aa7.61□□□□□ -1.19
HMGB1P42-201ENST00000532126 OXER1Q8TDS5 423 aa7.61□□□□□ -1.19
HMGB1P42-201ENST00000532126 RTF1Q92541 710 aaKnown RBP7.61□□□□□ -1.19
HMGB1P42-201ENST00000532126 PBXIP1Q96AQ6 731 aa7.61□□□□□ -1.19
HMGB1P42-201ENST00000532126 PLEKHF1Q96S99 279 aa7.61□□□□□ -1.19
HMGB1P42-201ENST00000532126 ZBTB7AO95365 584 aa7.6□□□□□ -1.19
HMGB1P42-201ENST00000532126 PDGFDQ9GZP0 370 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P42-201ENST00000532126 OCEL1Q9H607 264 aa7.6□□□□□ -1.19
HMGB1P42-201ENST00000532126 SPON1Q9HCB6 807 aa7.6□□□□□ -1.19
HMGB1P42-201ENST00000532126 PAPPAQ13219 1627 aa7.6□□□□□ -1.19
HMGB1P42-201ENST00000532126 PNPLA7Q6ZV29 1317 aa7.59□□□□□ -1.19
HMGB1P42-201ENST00000532126 HTATSF1O43719 755 aaKnown RBP7.59□□□□□ -1.19
HMGB1P42-201ENST00000532126 CANXP27824 592 aaKnown RBP7.59□□□□□ -1.19
HMGB1P42-201ENST00000532126 SLC39A6Q13433 755 aa7.59□□□□□ -1.19
HMGB1P42-201ENST00000532126 ITPK1Q13572 414 aa7.59□□□□□ -1.19
HMGB1P42-201ENST00000532126 NFE2L2Q16236 605 aa7.59□□□□□ -1.19
HMGB1P42-201ENST00000532126 MCM10Q7L590 875 aa7.59□□□□□ -1.19
HMGB1P42-201ENST00000532126 TTC5Q8N0Z6 440 aa7.59□□□□□ -1.19
HMGB1P42-201ENST00000532126 LINC00116Q8NCU8 138 aa7.59□□□□□ -1.19
HMGB1P42-201ENST00000532126 MTFR1LQ9H019 292 aa7.59□□□□□ -1.19
HMGB1P42-201ENST00000532126 MRC1P22897 1456 aa7.59□□□□□ -1.19
HMGB1P42-201ENST00000532126 KAT6BQ8WYB5 2073 aa7.59□□□□□ -1.19
HMGB1P42-201ENST00000532126 ITGB4P16144 1822 aa7.59□□□□□ -1.19
HMGB1P42-201ENST00000532126 CEMIPQ8WUJ3 1361 aa7.59□□□□□ -1.2
HMGB1P42-201ENST00000532126 LY75O60449 1722 aa7.58□□□□□ -1.2
HMGB1P42-201ENST00000532126 BTBD11A6QL63 1104 aa7.58□□□□□ -1.2
HMGB1P42-201ENST00000532126 GALR2O43603 387 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P42-201ENST00000532126 PTGDRQ13258 359 aa7.58□□□□□ -1.2
HMGB1P42-201ENST00000532126 DCTN1Q14203 1278 aa7.58□□□□□ -1.2
HMGB1P42-201ENST00000532126 TMEM259Q4ZIN3 620 aa7.58□□□□□ -1.2
HMGB1P42-201ENST00000532126 CCDC146Q8IYE0 955 aa7.58□□□□□ -1.2
HMGB1P42-201ENST00000532126 FLAD1Q8NFF5 587 aa7.58□□□□□ -1.2
HMGB1P42-201ENST00000532126 SLC4A9Q96Q91 983 aa7.58□□□□□ -1.2
HMGB1P42-201ENST00000532126 ADAMTS8Q9UP79 889 aa7.58□□□□□ -1.2
HMGB1P42-201ENST00000532126 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.57□□□□□ -1.2
HMGB1P42-201ENST00000532126 EVI5O60447 810 aa7.57□□□□□ -1.2
HMGB1P42-201ENST00000532126 PHF14O94880 888 aa7.57□□□□□ -1.2
HMGB1P42-201ENST00000532126 RIPK4P57078 832 aa7.57□□□□□ -1.2
HMGB1P42-201ENST00000532126 IRX5P78411 483 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms