RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 KIAA1211Q6ZU35 1233 aa20.38■□□□□ 0.85
VPS26B-206ENST00000531741 PDIA6Q15084 440 aa20.37■□□□□ 0.85
VPS26B-206ENST00000531741 LMOD2Q6P5Q4 547 aa20.37■□□□□ 0.85
VPS26B-206ENST00000531741 PROSER2Q86WR7 435 aaPredicted RBP20.37■□□□□ 0.85
VPS26B-206ENST00000531741 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.37■□□□□ 0.85
VPS26B-206ENST00000531741 TRIM44Q96DX7 344 aaPredicted RBP20.36■□□□□ 0.85
VPS26B-206ENST00000531741 ESPNB1AK53 854 aa20.36■□□□□ 0.85
VPS26B-206ENST00000531741 NCLP19338 710 aaKnown RBP20.36■□□□□ 0.85
VPS26B-206ENST00000531741 CWF19L2Q2TBE0 894 aaKnown RBP20.36■□□□□ 0.85
VPS26B-206ENST00000531741 ANP32BQ92688 251 aaKnown RBP20.36■□□□□ 0.85
VPS26B-206ENST00000531741 PRAMEF22A3QJZ6 481 aa20.35■□□□□ 0.85
VPS26B-206ENST00000531741 ZNF790Q6PG37 636 aa20.35■□□□□ 0.85
VPS26B-206ENST00000531741 KCNB2Q92953 911 aa20.35■□□□□ 0.85
VPS26B-206ENST00000531741 KDM6AO15550 1401 aaPredicted RBP20.35■□□□□ 0.85
VPS26B-206ENST00000531741 C5P01031 1676 aa20.35■□□□□ 0.85
VPS26B-206ENST00000531741 NPHP3Q7Z494 1330 aa20.35■□□□□ 0.85
VPS26B-206ENST00000531741 WDR33Q9C0J8 1336 aaKnown RBP20.35■□□□□ 0.85
VPS26B-206ENST00000531741 IFIT2P09913 472 aaKnown RBP20.34■□□□□ 0.85
VPS26B-206ENST00000531741 EVI5LQ96CN4 794 aa20.34■□□□□ 0.85
VPS26B-206ENST00000531741 KAZALD1Q96I82 304 aa20.34■□□□□ 0.85
VPS26B-206ENST00000531741 SLC52A2Q9HAB3 445 aa20.34■□□□□ 0.85
VPS26B-206ENST00000531741 DIAPH3Q9NSV4 1193 aa20.34■□□□□ 0.85
VPS26B-206ENST00000531741 MRC1P22897 1456 aa20.34■□□□□ 0.85
VPS26B-206ENST00000531741 CWC27Q6UX04 472 aaKnown RBP20.34■□□□□ 0.85
VPS26B-206ENST00000531741 RAPGEF4Q8WZA2 1011 aa20.34■□□□□ 0.85
VPS26B-206ENST00000531741 SUCLG2Q96I99 432 aa20.34■□□□□ 0.85
VPS26B-206ENST00000531741 COL18A1P39060 1754 aa20.34■□□□□ 0.85
VPS26B-206ENST00000531741 LARP1Q6PKG0 1096 aaKnown RBP20.33■□□□□ 0.85
VPS26B-206ENST00000531741 ANO8Q9HCE9 1232 aaPredicted RBP20.33■□□□□ 0.85
VPS26B-206ENST00000531741 DCCP43146 1447 aa20.33■□□□□ 0.85
VPS26B-206ENST00000531741 RASEFQ8IZ41 740 aa20.33■□□□□ 0.84
VPS26B-206ENST00000531741 HIP1O00291 1037 aa20.32■□□□□ 0.84
VPS26B-206ENST00000531741 NOL8Q76FK4 1167 aaKnown RBP20.32■□□□□ 0.84
VPS26B-206ENST00000531741 TM6SF1Q9BZW5 370 aa20.32■□□□□ 0.84
VPS26B-206ENST00000531741 LIMCH1Q9UPQ0 1083 aa20.32■□□□□ 0.84
VPS26B-206ENST00000531741 PA2G4Q9UQ80 394 aaKnown RBP20.32■□□□□ 0.84
VPS26B-206ENST00000531741 SPG7Q9UQ90 795 aa20.32■□□□□ 0.84
VPS26B-206ENST00000531741 LRSAM1Q6UWE0 723 aa20.31■□□□□ 0.84
VPS26B-206ENST00000531741 BICC1Q9H694 974 aaKnown RBP20.31■□□□□ 0.84
VPS26B-206ENST00000531741 SNRKQ9NRH2 765 aa20.31■□□□□ 0.84
VPS26B-206ENST00000531741 TMEM63CQ9P1W3 806 aa20.31■□□□□ 0.84
VPS26B-206ENST00000531741 IGKV5-2P06315 115 aa20.31■□□□□ 0.84
VPS26B-206ENST00000531741 PHKG2P15735 406 aa20.31■□□□□ 0.84
VPS26B-206ENST00000531741 TATP17735 454 aaPredicted RBP20.31■□□□□ 0.84
VPS26B-206ENST00000531741 SASH1O94885 1247 aa20.3■□□□□ 0.84
VPS26B-206ENST00000531741 PRIM1P49642 420 aaKnown RBP20.3■□□□□ 0.84
VPS26B-206ENST00000531741 G3BP1Q13283 466 aaKnown RBP eCLIP20.3■□□□□ 0.84
VPS26B-206ENST00000531741 AACSQ86V21 672 aa20.3■□□□□ 0.84
VPS26B-206ENST00000531741 ERBB4Q15303 1308 aa20.3■□□□□ 0.84
VPS26B-206ENST00000531741 AK2P54819 239 aa20.3■□□□□ 0.84
VPS26B-206ENST00000531741 NEXNQ0ZGT2 675 aa20.3■□□□□ 0.84
VPS26B-206ENST00000531741 TMEM87AQ8NBN3 555 aa20.3■□□□□ 0.84
VPS26B-206ENST00000531741 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.3■□□□□ 0.84
VPS26B-206ENST00000531741 RPAP1Q9BWH6 1393 aaPredicted RBP20.3■□□□□ 0.84
VPS26B-206ENST00000531741 COL15A1P39059 1388 aa20.29■□□□□ 0.84
VPS26B-206ENST00000531741 ZC3H6P61129 1189 aaKnown RBP20.29■□□□□ 0.84
VPS26B-206ENST00000531741 RUFY3Q7L099 469 aa20.29■□□□□ 0.84
VPS26B-206ENST00000531741 RIC3Q7Z5B4 369 aa20.29■□□□□ 0.84
VPS26B-206ENST00000531741 RBSNQ9H1K0 784 aa20.29■□□□□ 0.84
VPS26B-206ENST00000531741 RBM27Q9P2N5 1060 aaKnown RBP20.29■□□□□ 0.84
VPS26B-206ENST00000531741 PKD1L3Q7Z443 1732 aa20.29■□□□□ 0.84
VPS26B-206ENST00000531741 MEGF6O75095 1541 aa20.29■□□□□ 0.84
VPS26B-206ENST00000531741 NEURL1BA8MQ27 555 aa20.28■□□□□ 0.84
VPS26B-206ENST00000531741 HS1BP3Q53T59 392 aa20.28■□□□□ 0.84
VPS26B-206ENST00000531741 VPS53Q5VIR6 699 aa20.28■□□□□ 0.84
VPS26B-206ENST00000531741 FOXD4L5Q5VV16 416 aaPredicted RBP20.28■□□□□ 0.84
VPS26B-206ENST00000531741 FOXD4L4Q8WXT5 416 aaPredicted RBP20.28■□□□□ 0.84
VPS26B-206ENST00000531741 CHAMP1Q96JM3 812 aa20.28■□□□□ 0.84
VPS26B-206ENST00000531741 METTL22Q9BUU2 404 aaPredicted RBP20.28■□□□□ 0.84
VPS26B-206ENST00000531741 IFNL2Q8IZJ0 200 aa20.28■□□□□ 0.84
VPS26B-206ENST00000531741 SYAP1Q96A49 352 aaPredicted RBP20.28■□□□□ 0.84
VPS26B-206ENST00000531741 EAF2Q96CJ1 260 aaPredicted RBP20.28■□□□□ 0.84
VPS26B-206ENST00000531741 NLRP2Q9NX02 1062 aa20.28■□□□□ 0.84
VPS26B-206ENST00000531741 AIMP1Q12904 312 aaKnown RBP20.27■□□□□ 0.84
VPS26B-206ENST00000531741 GCKRQ14397 625 aa20.27■□□□□ 0.84
VPS26B-206ENST00000531741 NECTIN1Q15223 517 aa20.27■□□□□ 0.84
VPS26B-206ENST00000531741 PDLIM2Q96JY6 352 aa20.27■□□□□ 0.84
VPS26B-206ENST00000531741 ZSWIM6Q9HCJ5 1215 aa20.27■□□□□ 0.84
VPS26B-206ENST00000531741 NSFL1CQ9UNZ2 370 aaKnown RBP20.27■□□□□ 0.84
VPS26B-206ENST00000531741 CCDC171Q6TFL3 1326 aa20.27■□□□□ 0.84
VPS26B-206ENST00000531741 PTH1RQ03431 593 aa20.26■□□□□ 0.83
VPS26B-206ENST00000531741 SLC39A6Q13433 755 aa20.26■□□□□ 0.83
VPS26B-206ENST00000531741 LRP10Q7Z4F1 713 aa20.26■□□□□ 0.83
VPS26B-206ENST00000531741 DCAF5Q96JK2 942 aa20.26■□□□□ 0.83
VPS26B-206ENST00000531741 ZSCAN31Q96LW9 406 aaPredicted RBP20.26■□□□□ 0.83
VPS26B-206ENST00000531741 CASTP20810 708 aaKnown RBP20.26■□□□□ 0.83
VPS26B-206ENST00000531741 NFATC2IPQ8NCF5 419 aa20.26■□□□□ 0.83
VPS26B-206ENST00000531741 SH2B1Q9NRF2 756 aaPredicted RBP20.26■□□□□ 0.83
VPS26B-206ENST00000531741 XAGE3Q8WTP9 111 aa20.25■□□□□ 0.83
VPS26B-206ENST00000531741 PARP4Q9UKK3 1724 aaKnown RBP20.25■□□□□ 0.83
VPS26B-206ENST00000531741 SNRPA1P09661 255 aaKnown RBP20.25■□□□□ 0.83
VPS26B-206ENST00000531741 ZSCAN22P10073 491 aaPredicted RBP20.25■□□□□ 0.83
VPS26B-206ENST00000531741 ATF3P18847 181 aa20.25■□□□□ 0.83
VPS26B-206ENST00000531741 MAP4K1Q92918 833 aa20.25■□□□□ 0.83
VPS26B-206ENST00000531741 ZNF496Q96IT1 587 aaPredicted RBP20.25■□□□□ 0.83
VPS26B-206ENST00000531741 SYCE3A1L190 88 aa20.24■□□□□ 0.83
VPS26B-206ENST00000531741 COPS6Q7L5N1 327 aa20.24■□□□□ 0.83
VPS26B-206ENST00000531741 CYP46A1Q9Y6A2 500 aa20.24■□□□□ 0.83
VPS26B-206ENST00000531741 ZKSCAN1P17029 563 aaPredicted RBP20.23■□□□□ 0.83
VPS26B-206ENST00000531741 PRPF40BQ6NWY9 871 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms