RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-215	ENST00000531558	ELL2	O00472	640 aa	Predicted RBP	33.42	■■■□□ 2.94
PICALM-215	ENST00000531558	CHPF2	Q9P2E5	772 aa		33.42	■■■□□ 2.94
PICALM-215	ENST00000531558	MAP3K15	Q6ZN16	1313 aa		33.42	■■■□□ 2.94
PICALM-215	ENST00000531558	DCAF8L1	A6NGE4	600 aa		33.41	■■■□□ 2.94
PICALM-215	ENST00000531558	ERVV-1	B6SEH8	477 aa		33.41	■■■□□ 2.94
PICALM-215	ENST00000531558	FANCI	Q9NVI1	1328 aa		33.41	■■■□□ 2.94
PICALM-215	ENST00000531558	NRXN2	Q9P2S2	1712 aa		33.41	■■■□□ 2.94
PICALM-215	ENST00000531558	PXDNL	A1KZ92	1463 aa		33.4	■■■□□ 2.94
PICALM-215	ENST00000531558	ZNF521	Q96K83	1311 aa		33.4	■■■□□ 2.94
PICALM-215	ENST00000531558	SETDB2	Q96T68	719 aa		33.4	■■■□□ 2.94
PICALM-215	ENST00000531558	HLF	Q16534	295 aa		33.39	■■■□□ 2.94
PICALM-215	ENST00000531558	DBF4	Q9UBU7	674 aa	Predicted RBP	33.39	■■■□□ 2.94
PICALM-215	ENST00000531558	TGFB2	P61812	414 aa		33.38	■■■□□ 2.93
PICALM-215	ENST00000531558	TSPYL6	Q8N831	410 aa		33.38	■■■□□ 2.93
PICALM-215	ENST00000531558	AFDN	P55196	1824 aa	Known RBP	33.37	■■■□□ 2.93
PICALM-215	ENST00000531558	ZBTB3	Q9H5J0	574 aa		33.37	■■■□□ 2.93
PICALM-215	ENST00000531558	KIAA1551	Q9HCM1	1747 aa		33.36	■■■□□ 2.93
PICALM-215	ENST00000531558	GOLGB1	Q14789	3259 aa	Known RBP	33.36	■■■□□ 2.93
PICALM-215	ENST00000531558	XAGE3	Q8WTP9	111 aa		33.36	■■■□□ 2.93
PICALM-215	ENST00000531558	SPINK5	Q9NQ38	1064 aa	Predicted RBP	33.36	■■■□□ 2.93
PICALM-215	ENST00000531558	COPS6	Q7L5N1	327 aa		33.35	■■■□□ 2.93
PICALM-215	ENST00000531558	ATP10D	Q9P241	1426 aa		33.35	■■■□□ 2.93
PICALM-215	ENST00000531558	CHMP4A	Q9BY43	222 aa		33.34	■■■□□ 2.93
PICALM-215	ENST00000531558	NIP7	Q9Y221	180 aa	Known RBP eCLIP	33.34	■■■□□ 2.93
PICALM-215	ENST00000531558	GPR162	Q16538	588 aa		33.33	■■■□□ 2.93
PICALM-215	ENST00000531558	MYH16	Q9H6N6	1097 aa		33.33	■■■□□ 2.93
PICALM-215	ENST00000531558	HYPK	Q9NX55	129 aa		33.33	■■■□□ 2.93
PICALM-215	ENST00000531558	GOLGA2	Q08379	1002 aa		33.32	■■■□□ 2.92
PICALM-215	ENST00000531558	AIMP1	Q12904	312 aa	Known RBP	33.32	■■■□□ 2.92
PICALM-215	ENST00000531558	TWISTNB	Q3B726	338 aa	Predicted RBP	33.32	■■■□□ 2.92
PICALM-215	ENST00000531558	PRR5L	Q6MZQ0	368 aa		33.32	■■■□□ 2.92
PICALM-215	ENST00000531558	PELP1	Q8IZL8	1130 aa	Known RBP	33.32	■■■□□ 2.92
PICALM-215	ENST00000531558		A0A0G2JLW4	131 aa		33.31	■■■□□ 2.92
PICALM-215	ENST00000531558	DPEP1	P16444	411 aa		33.31	■■■□□ 2.92
PICALM-215	ENST00000531558	CCDC30	Q5VVM6	783 aa		33.31	■■■□□ 2.92
PICALM-215	ENST00000531558	GIGYF2	Q6Y7W6	1299 aa	Known RBP	33.31	■■■□□ 2.92
PICALM-215	ENST00000531558	CNBD1	Q8NA66	436 aa		33.31	■■■□□ 2.92
PICALM-215	ENST00000531558	UTRN	P46939	3433 aa		33.3	■■■□□ 2.92
PICALM-215	ENST00000531558	NBPF5P	Q86XG9	351 aa	Predicted RBP	33.29	■■■□□ 2.92
PICALM-215	ENST00000531558	NUP98	P52948	1817 aa		33.29	■■■□□ 2.92
PICALM-215	ENST00000531558	YBX3	P16989	372 aa	Known RBP eCLIP	33.28	■■■□□ 2.92
PICALM-215	ENST00000531558	N4BP2	Q86UW6	1770 aa	Predicted RBP	33.28	■■■□□ 2.92
PICALM-215	ENST00000531558	NPHP1	O15259	732 aa		33.27	■■■□□ 2.92
PICALM-215	ENST00000531558	EXOSC9	Q06265	439 aa	Known RBP	33.27	■■■□□ 2.92
PICALM-215	ENST00000531558	WWC3	Q9ULE0	1092 aa		33.27	■■■□□ 2.92
PICALM-215	ENST00000531558	KCNA3	P22001	575 aa		33.25	■■■□□ 2.91
PICALM-215	ENST00000531558	GPT	P24298	496 aa		33.25	■■■□□ 2.91
PICALM-215	ENST00000531558	CHRNA5	P30532	468 aa		33.25	■■■□□ 2.91
PICALM-215	ENST00000531558	ST5	P78524	1137 aa		33.25	■■■□□ 2.91
PICALM-215	ENST00000531558	ZNF34	Q8IZ26	560 aa		33.25	■■■□□ 2.91
PICALM-215	ENST00000531558	CCDC24	Q8N4L8	307 aa		33.25	■■■□□ 2.91
PICALM-215	ENST00000531558	BRIP1	Q9BX63	1249 aa		33.25	■■■□□ 2.91
PICALM-215	ENST00000531558	UBN2	Q6ZU65	1347 aa		33.25	■■■□□ 2.91
PICALM-215	ENST00000531558	PLBD2	Q8NHP8	589 aa		33.24	■■■□□ 2.91
PICALM-215	ENST00000531558	FAM177B	A6PVY3	158 aa		33.23	■■■□□ 2.91
PICALM-215	ENST00000531558	HSP90AB3P	Q58FF7	597 aa		33.23	■■■□□ 2.91
PICALM-215	ENST00000531558	TPTE2	Q6XPS3	522 aa		33.23	■■■□□ 2.91
PICALM-215	ENST00000531558	IBTK	Q9P2D0	1353 aa	Predicted RBP	33.22	■■■□□ 2.91
PICALM-215	ENST00000531558		E9PSI1	815 aa		33.22	■■■□□ 2.91
PICALM-215	ENST00000531558	ANKRD13D	Q6ZTN6	518 aa		33.22	■■■□□ 2.91
PICALM-215	ENST00000531558	STK31	Q9BXU1	1019 aa		33.22	■■■□□ 2.91
PICALM-215	ENST00000531558	PHAX	Q9H814	394 aa	Known RBP	33.22	■■■□□ 2.91
PICALM-215	ENST00000531558	ANKRD31	Q8N7Z5	1873 aa		33.21	■■■□□ 2.91
PICALM-215	ENST00000531558	GRIN3B	O60391	1043 aa		33.21	■■■□□ 2.91
PICALM-215	ENST00000531558	VAMP4	O75379	141 aa		33.21	■■■□□ 2.91
PICALM-215	ENST00000531558	PDE6B	P35913	854 aa		33.2	■■■□□ 2.91
PICALM-215	ENST00000531558	PARP10	Q53GL7	1025 aa		33.2	■■■□□ 2.91
PICALM-215	ENST00000531558	NYX	Q9GZU5	481 aa		33.2	■■■□□ 2.91
PICALM-215	ENST00000531558	PIM2	Q9P1W9	311 aa		33.2	■■■□□ 2.91
PICALM-215	ENST00000531558	BRCA1	P38398	1863 aa	Known RBP	33.19	■■■□□ 2.9
PICALM-215	ENST00000531558	TCERG1	O14776	1098 aa	Known RBP	33.19	■■■□□ 2.9
PICALM-215	ENST00000531558	C2CD5	Q86YS7	1000 aa		33.19	■■■□□ 2.9
PICALM-215	ENST00000531558	TCIRG1	Q13488	830 aa		33.18	■■■□□ 2.9
PICALM-215	ENST00000531558	SUSD4	Q5VX71	490 aa		33.18	■■■□□ 2.9
PICALM-215	ENST00000531558	PDZRN3	Q9UPQ7	1066 aa		33.18	■■■□□ 2.9
PICALM-215	ENST00000531558	BCS1L	Q9Y276	419 aa		33.18	■■■□□ 2.9
PICALM-215	ENST00000531558		H0YIN7	160 aa		33.17	■■■□□ 2.9
PICALM-215	ENST00000531558	SLFN5	Q08AF3	891 aa		33.17	■■■□□ 2.9
PICALM-215	ENST00000531558	ANKRD36C	Q5JPF3	1778 aa		33.16	■■■□□ 2.9
PICALM-215	ENST00000531558	GTF2E1	P29083	439 aa	Predicted RBP	33.16	■■■□□ 2.9
PICALM-215	ENST00000531558	NTSR2	O95665	410 aa		33.15	■■■□□ 2.9
PICALM-215	ENST00000531558	DALRD3	Q5D0E6	543 aa	Known RBP	33.15	■■■□□ 2.9
PICALM-215	ENST00000531558	ABCC12	Q96J65	1359 aa		33.15	■■■□□ 2.9
PICALM-215	ENST00000531558	DLEC1	Q9Y238	1755 aa		33.15	■■■□□ 2.9
PICALM-215	ENST00000531558	SLC4A2	P04920	1241 aa		33.14	■■■□□ 2.9
PICALM-215	ENST00000531558	PPP1R42	Q7Z4L9	355 aa		33.14	■■■□□ 2.9
PICALM-215	ENST00000531558	NUTM1	Q86Y26	1132 aa		33.14	■■■□□ 2.9
PICALM-215	ENST00000531558	CDCA7L	Q96GN5	454 aa		33.14	■■■□□ 2.9
PICALM-215	ENST00000531558	COL11A2	P13942	1736 aa	Predicted RBP	33.14	■■■□□ 2.89
PICALM-215	ENST00000531558	DDX58	O95786	925 aa	Known RBP	33.13	■■■□□ 2.89
PICALM-215	ENST00000531558	ERFE	Q4G0M1	354 aa		33.13	■■■□□ 2.89
PICALM-215	ENST00000531558	RIC3	Q7Z5B4	369 aa		33.13	■■■□□ 2.89
PICALM-215	ENST00000531558	NLRP10	Q86W26	655 aa		33.13	■■■□□ 2.89
PICALM-215	ENST00000531558	ARFGEF2	Q9Y6D5	1785 aa		33.13	■■■□□ 2.89
PICALM-215	ENST00000531558	UTP14A	Q9BVJ6	771 aa	Known RBP	33.12	■■■□□ 2.89
PICALM-215	ENST00000531558	ISCA1	Q9BUE6	129 aa		33.11	■■■□□ 2.89
PICALM-215	ENST00000531558	RIC1	Q4ADV7	1423 aa		33.11	■■■□□ 2.89
PICALM-215	ENST00000531558	RNF123	Q5XPI4	1314 aa		33.1	■■■□□ 2.89
PICALM-215	ENST00000531558	KLRG2	A4D1S0	409 aa	Predicted RBP	33.1	■■■□□ 2.89
PICALM-215	ENST00000531558	G2E3	Q7L622	706 aa		33.1	■■■□□ 2.89

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