RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 PHLDB1Q86UU1 1377 aa8.87□□□□□ -0.99
ATM-216ENST00000531525 SAMD9Q5K651 1589 aa8.87□□□□□ -0.99
ATM-216ENST00000531525 RAPGEF6Q8TEU7 1601 aa8.86□□□□□ -0.99
ATM-216ENST00000531525 ABL1P00519 1130 aa8.86□□□□□ -0.99
ATM-216ENST00000531525 FBXO33Q7Z6M2 555 aa8.86□□□□□ -0.99
ATM-216ENST00000531525 TANGO6Q9C0B7 1094 aa8.86□□□□□ -0.99
ATM-216ENST00000531525 ATP10BO94823 1461 aa8.86□□□□□ -0.99
ATM-216ENST00000531525 USP17L3A6NCW0 530 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 USP17L4A6NCW7 530 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 SOBPA7XYQ1 873 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 USP17L15C9J2P7 530 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 USP17L10C9JJH3 530 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 USP17L13C9JLJ4 530 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 USP17L12C9JPN9 530 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 USP17L11C9JVI0 530 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 USP17L21D6R901 530 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 USP17L18D6R9N7 530 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 USP17L22D6RA61 530 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 USP17L17D6RBQ6 530 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 USP17L19D6RCP7 530 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 USP17L20D6RJB6 530 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 ATP5J2-PTCD1G3V325 749 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 MAPK1P28482 360 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 USP17L24Q0WX57 530 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 MAP7D1Q3KQU3 841 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 USP17L2Q6R6M4 530 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 USP17L1Q7RTZ2 530 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 FAM200AQ8TCP9 573 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 INSM2Q96T92 566 aaPredicted RBP8.85□□□□□ -0.99
ATM-216ENST00000531525 PRXQ9BXM0 1461 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 CFAP74Q9C0B2 1584 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 SKIP12755 728 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 CTSOP43234 321 aaPredicted RBP8.85□□□□□ -0.99
ATM-216ENST00000531525 CRTC2Q53ET0 693 aaPredicted RBP8.85□□□□□ -0.99
ATM-216ENST00000531525 OXLD1Q5BKU9 147 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 DEPDC4Q8N2C3 294 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 DNMT3LQ9UJW3 386 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 BRPF3Q9ULD4 1205 aa8.85□□□□□ -0.99
ATM-216ENST00000531525 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.85□□□□□ -0.99
ATM-216ENST00000531525 TTLL8A6PVC2 850 aa8.84□□□□□ -0.99
ATM-216ENST00000531525 USP4Q13107 963 aa8.84□□□□□ -0.99
ATM-216ENST00000531525 CYP2U1Q7Z449 544 aa8.84□□□□□ -0.99
ATM-216ENST00000531525 NFATC2IPQ8NCF5 419 aa8.84□□□□□ -0.99
ATM-216ENST00000531525 MICAL1Q8TDZ2 1067 aa8.84□□□□□ -0.99
ATM-216ENST00000531525 CLP1Q92989 425 aaKnown RBP8.84□□□□□ -0.99
ATM-216ENST00000531525 ZNF775Q96BV0 537 aaPredicted RBP8.84□□□□□ -0.99
ATM-216ENST00000531525 BACH2Q9BYV9 841 aa8.84□□□□□ -0.99
ATM-216ENST00000531525 LNPKQ9C0E8 428 aa8.84□□□□□ -0.99
ATM-216ENST00000531525 ANO2Q9NQ90 1003 aa8.84□□□□□ -0.99
ATM-216ENST00000531525 TMA7Q9Y2S6 64 aaKnown RBP8.84□□□□□ -0.99
ATM-216ENST00000531525 SIGLEC1Q9BZZ2 1709 aa8.84□□□□□ -0.99
ATM-216ENST00000531525 FER1L4A9Z1Z3 1794 aa8.83□□□□□ -1
ATM-216ENST00000531525 MYCP01106 439 aaPredicted RBP8.83□□□□□ -1
ATM-216ENST00000531525 LARP1Q6PKG0 1096 aaKnown RBP8.83□□□□□ -1
ATM-216ENST00000531525 NOP9Q86U38 636 aaKnown RBP8.83□□□□□ -1
ATM-216ENST00000531525 ZMYM4Q5VZL5 1548 aa8.83□□□□□ -1
ATM-216ENST00000531525 HDLBPQ00341 1268 aaKnown RBP8.82□□□□□ -1
ATM-216ENST00000531525 PIK3R5Q8WYR1 880 aa8.82□□□□□ -1
ATM-216ENST00000531525 DHX38Q92620 1227 aaKnown RBP8.82□□□□□ -1
ATM-216ENST00000531525 A0A1W2PRU2 124 aa8.81□□□□□ -1
ATM-216ENST00000531525 FAM196BA6NMK8 535 aa8.81□□□□□ -1
ATM-216ENST00000531525 H3BRB1 525 aa8.81□□□□□ -1
ATM-216ENST00000531525 MAN1A2O60476 641 aa8.81□□□□□ -1
ATM-216ENST00000531525 RAPGEF3O95398 923 aa8.81□□□□□ -1
ATM-216ENST00000531525 RASA1P20936 1047 aa8.81□□□□□ -1
ATM-216ENST00000531525 ZNF211Q13398 564 aaPredicted RBP8.81□□□□□ -1
ATM-216ENST00000531525 ESF1Q9H501 851 aaKnown RBP8.81□□□□□ -1
ATM-216ENST00000531525 TUT1Q9H6E5 874 aaKnown RBP8.81□□□□□ -1
ATM-216ENST00000531525 POLMQ9NP87 494 aaPredicted RBP8.81□□□□□ -1
ATM-216ENST00000531525 MKRN1Q9UHC7 482 aaKnown RBP8.81□□□□□ -1
ATM-216ENST00000531525 TTC37Q6PGP7 1564 aa8.81□□□□□ -1
ATM-216ENST00000531525 FIGNL2A6NMB9 653 aa8.8□□□□□ -1
ATM-216ENST00000531525 USP17L5A8MUK1 530 aa8.8□□□□□ -1
ATM-216ENST00000531525 RAB11FIP3O75154 756 aa8.8□□□□□ -1
ATM-216ENST00000531525 RNF217Q8TC41 542 aa8.8□□□□□ -1
ATM-216ENST00000531525 ARHGEF10LQ9HCE6 1279 aa8.8□□□□□ -1
ATM-216ENST00000531525 FANCAO15360 1455 aa8.8□□□□□ -1
ATM-216ENST00000531525 EFCAB5A4FU69 1503 aa8.8□□□□□ -1
ATM-216ENST00000531525 SBNO2Q9Y2G9 1366 aa8.8□□□□□ -1
ATM-216ENST00000531525 SCAMP3O14828 347 aaKnown RBP8.8□□□□□ -1
ATM-216ENST00000531525 GNRH1P01148 92 aa8.8□□□□□ -1
ATM-216ENST00000531525 NCOA4Q13772 614 aa8.8□□□□□ -1
ATM-216ENST00000531525 NUP153P49790 1475 aaKnown RBP8.8□□□□□ -1
ATM-216ENST00000531525 PREX1Q8TCU6 1659 aa8.79□□□□□ -1
ATM-216ENST00000531525 DENND4BO75064 1496 aaPredicted RBP8.79□□□□□ -1
ATM-216ENST00000531525 GTF2F1P35269 517 aaKnown RBP eCLIP8.79□□□□□ -1
ATM-216ENST00000531525 CLN3Q13286 438 aa8.79□□□□□ -1
ATM-216ENST00000531525 EAPPQ56P03 285 aaPredicted RBP8.79□□□□□ -1
ATM-216ENST00000531525 GLYCTKQ8IVS8 523 aa8.79□□□□□ -1
ATM-216ENST00000531525 RAB6BQ9NRW1 208 aa8.79□□□□□ -1
ATM-216ENST00000531525 IQSEC3Q9UPP2 1182 aaPredicted RBP8.79□□□□□ -1
ATM-216ENST00000531525 ZFYVE16Q7Z3T8 1539 aa8.79□□□□□ -1
ATM-216ENST00000531525 FHOD3Q2V2M9 1422 aa8.78□□□□□ -1
ATM-216ENST00000531525 TLDC2A0PJX2 215 aa8.78□□□□□ -1
ATM-216ENST00000531525 MEN1O00255 615 aa8.78□□□□□ -1
ATM-216ENST00000531525 LZTS3O60299 673 aaPredicted RBP8.78□□□□□ -1
ATM-216ENST00000531525 STAU1O95793 577 aaKnown RBP8.78□□□□□ -1
ATM-216ENST00000531525 IL2RAP01589 272 aa8.78□□□□□ -1
ATM-216ENST00000531525 RNF144AP50876 292 aaPredicted RBP8.78□□□□□ -1
ATM-216ENST00000531525 PTK7Q13308 1070 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms