RNA–Protein interactions for RNA: ENST00000531319.1

AP004608.1-201, humanhuman

TSL 2 BASIC

Gene AP004608.1, Length 1,402 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-201ENST00000531319 XAGE3Q8WTP9 111 aa27.55■■■□□ 2
AP004608.1-201ENST00000531319 TCERG1O14776 1098 aaKnown RBP27.54■■■□□ 2
AP004608.1-201ENST00000531319 COPS6Q7L5N1 327 aa27.54■■■□□ 2
AP004608.1-201ENST00000531319 NPM2Q86SE8 214 aaKnown RBP27.54■■■□□ 2
AP004608.1-201ENST00000531319 MAP3K15Q6ZN16 1313 aa27.53■■■□□ 2
AP004608.1-201ENST00000531319 POLRMTO00411 1230 aaKnown RBP27.53■■■□□ 2
AP004608.1-201ENST00000531319 CCDC30Q5VVM6 783 aa27.52■■■□□ 2
AP004608.1-201ENST00000531319 ZBTB3Q9H5J0 574 aa27.52■■■□□ 2
AP004608.1-201ENST00000531319 PHAXQ9H814 394 aaKnown RBP27.52■■■□□ 2
AP004608.1-201ENST00000531319 NRXN2Q9P2S2 1712 aa27.52■■■□□ 2
AP004608.1-201ENST00000531319 HYPKQ9NX55 129 aa27.51■■□□□ 1.99
AP004608.1-201ENST00000531319 PPP1R1BQ9UD71 204 aaPredicted RBP27.51■■□□□ 1.99
AP004608.1-201ENST00000531319 ZBED9Q6R2W3 1325 aa27.51■■□□□ 1.99
AP004608.1-201ENST00000531319 ERVV-1B6SEH8 477 aa27.5■■□□□ 1.99
AP004608.1-201ENST00000531319 RGL2O15211 777 aa27.5■■□□□ 1.99
AP004608.1-201ENST00000531319 AIMP1Q12904 312 aaKnown RBP27.5■■□□□ 1.99
AP004608.1-201ENST00000531319 CLEC4GQ6UXB4 293 aa27.5■■□□□ 1.99
AP004608.1-201ENST00000531319 FHDC1Q9C0D6 1143 aaPredicted RBP27.5■■□□□ 1.99
AP004608.1-201ENST00000531319 NUP98P52948 1817 aa27.5■■□□□ 1.99
AP004608.1-201ENST00000531319 KIF6Q6ZMV9 814 aa27.5■■□□□ 1.99
AP004608.1-201ENST00000531319 BICDL1Q6ZP65 573 aa27.5■■□□□ 1.99
AP004608.1-201ENST00000531319 AFDNP55196 1824 aaKnown RBP27.49■■□□□ 1.99
AP004608.1-201ENST00000531319 C10orf71Q711Q0 1435 aa27.48■■□□□ 1.99
AP004608.1-201ENST00000531319 PARP3Q9Y6F1 533 aa27.48■■□□□ 1.99
AP004608.1-201ENST00000531319 ATP10DQ9P241 1426 aa27.48■■□□□ 1.99
AP004608.1-201ENST00000531319 G2E3Q7L622 706 aa27.47■■□□□ 1.99
AP004608.1-201ENST00000531319 KIF13BQ9NQT8 1826 aa27.46■■□□□ 1.99
AP004608.1-201ENST00000531319 GIGYF2Q6Y7W6 1299 aaKnown RBP27.46■■□□□ 1.99
AP004608.1-201ENST00000531319 ZNF652Q9Y2D9 606 aa27.46■■□□□ 1.99
AP004608.1-201ENST00000531319 KIAA1551Q9HCM1 1747 aa27.46■■□□□ 1.99
AP004608.1-201ENST00000531319 SYT17Q9BSW7 474 aa27.45■■□□□ 1.98
AP004608.1-201ENST00000531319 CARMIL3Q8ND23 1372 aa27.45■■□□□ 1.98
AP004608.1-201ENST00000531319 ARFGEF2Q9Y6D5 1785 aa27.44■■□□□ 1.98
AP004608.1-201ENST00000531319 SLC4A2P04920 1241 aa27.44■■□□□ 1.98
AP004608.1-201ENST00000531319 CHMP4AQ9BY43 222 aa27.44■■□□□ 1.98
AP004608.1-201ENST00000531319 UBN2Q6ZU65 1347 aa27.44■■□□□ 1.98
AP004608.1-201ENST00000531319 SERPINB2P05120 415 aa27.43■■□□□ 1.98
AP004608.1-201ENST00000531319 ZNF34Q8IZ26 560 aa27.43■■□□□ 1.98
AP004608.1-201ENST00000531319 NLGN2Q8NFZ4 835 aa27.43■■□□□ 1.98
AP004608.1-201ENST00000531319 STK31Q9BXU1 1019 aa27.43■■□□□ 1.98
AP004608.1-201ENST00000531319 ANKRD36CQ5JPF3 1778 aa27.43■■□□□ 1.98
AP004608.1-201ENST00000531319 ANKRD13DQ6ZTN6 518 aa27.42■■□□□ 1.98
AP004608.1-201ENST00000531319 PLBD2Q8NHP8 589 aa27.42■■□□□ 1.98
AP004608.1-201ENST00000531319 SETDB2Q96T68 719 aa27.42■■□□□ 1.98
AP004608.1-201ENST00000531319 NIP7Q9Y221 180 aaKnown RBP eCLIP27.42■■□□□ 1.98
AP004608.1-201ENST00000531319 GOLGB1Q14789 3259 aaKnown RBP27.42■■□□□ 1.98
AP004608.1-201ENST00000531319 KLHL34Q8N239 644 aa27.41■■□□□ 1.98
AP004608.1-201ENST00000531319 CD2APQ9Y5K6 639 aa27.41■■□□□ 1.98
AP004608.1-201ENST00000531319 GPTP24298 496 aa27.4■■□□□ 1.98
AP004608.1-201ENST00000531319 ADCY9O60503 1353 aa27.4■■□□□ 1.98
AP004608.1-201ENST00000531319 PRR5LQ6MZQ0 368 aa27.39■■□□□ 1.97
AP004608.1-201ENST00000531319 PXDNLA1KZ92 1463 aa27.38■■□□□ 1.97
AP004608.1-201ENST00000531319 FLIIQ13045 1269 aa27.38■■□□□ 1.97
AP004608.1-201ENST00000531319 ANKRD31Q8N7Z5 1873 aa27.38■■□□□ 1.97
AP004608.1-201ENST00000531319 TCIRG1Q13488 830 aa27.37■■□□□ 1.97
AP004608.1-201ENST00000531319 CCDC24Q8N4L8 307 aa27.37■■□□□ 1.97
AP004608.1-201ENST00000531319 SSH1Q8WYL5 1049 aa27.37■■□□□ 1.97
AP004608.1-201ENST00000531319 CACNA1FO60840 1977 aa27.37■■□□□ 1.97
AP004608.1-201ENST00000531319 SUSD4Q5VX71 490 aa27.35■■□□□ 1.97
AP004608.1-201ENST00000531319 MRPL50Q8N5N7 158 aaKnown RBP27.35■■□□□ 1.97
AP004608.1-201ENST00000531319 FAM177BA6PVY3 158 aa27.34■■□□□ 1.97
AP004608.1-201ENST00000531319 NBPF5PQ86XG9 351 aaPredicted RBP27.34■■□□□ 1.97
AP004608.1-201ENST00000531319 ISCA1Q9BUE6 129 aa27.34■■□□□ 1.97
AP004608.1-201ENST00000531319 N4BP2Q86UW6 1770 aaPredicted RBP27.34■■□□□ 1.97
AP004608.1-201ENST00000531319 PI4KAP2A4QPH2 592 aa27.33■■□□□ 1.97
AP004608.1-201ENST00000531319 NTSR2O95665 410 aa27.33■■□□□ 1.97
AP004608.1-201ENST00000531319 CT47B1P0C2W7 299 aaPredicted RBP27.33■■□□□ 1.97
AP004608.1-201ENST00000531319 RIC3Q7Z5B4 369 aa27.33■■□□□ 1.97
AP004608.1-201ENST00000531319 NLRP10Q86W26 655 aa27.33■■□□□ 1.97
AP004608.1-201ENST00000531319 PI4KAP1Q8N8J0 262 aa27.33■■□□□ 1.97
AP004608.1-201ENST00000531319 CNBD1Q8NA66 436 aa27.33■■□□□ 1.97
AP004608.1-201ENST00000531319 IBTKQ9P2D0 1353 aaPredicted RBP27.33■■□□□ 1.97
AP004608.1-201ENST00000531319 HSP90AB3PQ58FF7 597 aa27.33■■□□□ 1.96
AP004608.1-201ENST00000531319 KSR2Q6VAB6 950 aa27.33■■□□□ 1.96
AP004608.1-201ENST00000531319 ZNF428Q96B54 188 aa27.33■■□□□ 1.96
AP004608.1-201ENST00000531319 BCL2L13Q9BXK5 485 aa27.33■■□□□ 1.96
AP004608.1-201ENST00000531319 MAP3K2Q9Y2U5 619 aa27.33■■□□□ 1.96
AP004608.1-201ENST00000531319 ABCC12Q96J65 1359 aa27.32■■□□□ 1.96
AP004608.1-201ENST00000531319 TNRC6CQ9HCJ0 1690 aaKnown RBP27.32■■□□□ 1.96
AP004608.1-201ENST00000531319 ATP5J2-PTCD1G3V325 749 aa27.32■■□□□ 1.96
AP004608.1-201ENST00000531319 UTRNP46939 3433 aa27.31■■□□□ 1.96
AP004608.1-201ENST00000531319 DDX58O95786 925 aaKnown RBP27.31■■□□□ 1.96
AP004608.1-201ENST00000531319 METTL22Q9BUU2 404 aaPredicted RBP27.31■■□□□ 1.96
AP004608.1-201ENST00000531319 COL11A2P13942 1736 aaPredicted RBP27.31■■□□□ 1.96
AP004608.1-201ENST00000531319 KCNA3P22001 575 aa27.3■■□□□ 1.96
AP004608.1-201ENST00000531319 FKBP5Q13451 457 aaPredicted RBP27.3■■□□□ 1.96
AP004608.1-201ENST00000531319 ALDH1L2Q3SY69 923 aa27.3■■□□□ 1.96
AP004608.1-201ENST00000531319 PARP10Q53GL7 1025 aa27.3■■□□□ 1.96
AP004608.1-201ENST00000531319 NUTM1Q86Y26 1132 aa27.3■■□□□ 1.96
AP004608.1-201ENST00000531319 MYD88Q99836 296 aa27.3■■□□□ 1.96
AP004608.1-201ENST00000531319 DPEP1P16444 411 aa27.29■■□□□ 1.96
AP004608.1-201ENST00000531319 RARSP54136 660 aaKnown RBP27.29■■□□□ 1.96
AP004608.1-201ENST00000531319 TRIM28Q13263 835 aaKnown RBP27.29■■□□□ 1.96
AP004608.1-201ENST00000531319 A0A0G2JLW4 131 aa27.28■■□□□ 1.96
AP004608.1-201ENST00000531319 IGKV5-2P06315 115 aa27.28■■□□□ 1.96
AP004608.1-201ENST00000531319 CHRNA5P30532 468 aa27.28■■□□□ 1.96
AP004608.1-201ENST00000531319 TGFB2P61812 414 aa27.28■■□□□ 1.96
AP004608.1-201ENST00000531319 ERFEQ4G0M1 354 aa27.28■■□□□ 1.96
AP004608.1-201ENST00000531319 TPTE2Q6XPS3 522 aa27.28■■□□□ 1.96
AP004608.1-201ENST00000531319 BRIP1Q9BX63 1249 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms