RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 PLIN1O60240 522 aa12.55□□□□□ -0.4
CTNND1-228ENST00000531007 PPP1R37O75864 691 aa12.55□□□□□ -0.4
CTNND1-228ENST00000531007 FMNL2Q96PY5 1086 aa12.55□□□□□ -0.4
CTNND1-228ENST00000531007 NOB1Q9ULX3 412 aaKnown RBP12.55□□□□□ -0.4
CTNND1-228ENST00000531007 BCL2L13Q9BXK5 485 aa12.54□□□□□ -0.4
CTNND1-228ENST00000531007 TMOD3Q9NYL9 352 aa12.54□□□□□ -0.4
CTNND1-228ENST00000531007 ATRNO75882 1429 aa12.54□□□□□ -0.4
CTNND1-228ENST00000531007 ONECUT3O60422 494 aaPredicted RBP12.53□□□□□ -0.4
CTNND1-228ENST00000531007 GIGYF1O75420 1035 aaPredicted RBP12.53□□□□□ -0.4
CTNND1-228ENST00000531007 SNRPA1P09661 255 aaKnown RBP12.53□□□□□ -0.4
CTNND1-228ENST00000531007 TRIM27P14373 513 aa12.53□□□□□ -0.4
CTNND1-228ENST00000531007 IRX6P78412 446 aaPredicted RBP12.53□□□□□ -0.4
CTNND1-228ENST00000531007 HDGFL1Q5TGJ6 251 aa12.53□□□□□ -0.4
CTNND1-228ENST00000531007 GJD4Q96KN9 370 aaPredicted RBP12.53□□□□□ -0.4
CTNND1-228ENST00000531007 TEX13AQ9BXU3 409 aaPredicted RBP12.53□□□□□ -0.4
CTNND1-228ENST00000531007 DDX19BQ9UMR2 479 aa12.53□□□□□ -0.4
CTNND1-228ENST00000531007 ERBB4Q15303 1308 aa12.53□□□□□ -0.4
CTNND1-228ENST00000531007 VSIG10Q8N0Z9 540 aa12.52□□□□□ -0.41
CTNND1-228ENST00000531007 CRBNQ96SW2 442 aa12.52□□□□□ -0.41
CTNND1-228ENST00000531007 QTRT2Q9H974 415 aaKnown RBP12.52□□□□□ -0.41
CTNND1-228ENST00000531007 DBF4Q9UBU7 674 aaPredicted RBP12.52□□□□□ -0.41
CTNND1-228ENST00000531007 BCL9O00512 1426 aa12.52□□□□□ -0.41
CTNND1-228ENST00000531007 PAPPAQ13219 1627 aa12.51□□□□□ -0.41
CTNND1-228ENST00000531007 SOCS7O14512 581 aa12.51□□□□□ -0.41
CTNND1-228ENST00000531007 RXRBP28702 533 aa12.51□□□□□ -0.41
CTNND1-228ENST00000531007 MVPQ14764 893 aaKnown RBP12.51□□□□□ -0.41
CTNND1-228ENST00000531007 KRT24Q2M2I5 525 aa12.51□□□□□ -0.41
CTNND1-228ENST00000531007 EXOC6Q8TAG9 804 aa12.51□□□□□ -0.41
CTNND1-228ENST00000531007 DOK7Q18PE1 504 aa12.5□□□□□ -0.41
CTNND1-228ENST00000531007 C20orf194Q5TEA3 1177 aa12.5□□□□□ -0.41
CTNND1-228ENST00000531007 CCDC136Q96JN2 1154 aa12.5□□□□□ -0.41
CTNND1-228ENST00000531007 HYPKQ9NX55 129 aa12.5□□□□□ -0.41
CTNND1-228ENST00000531007 ABCC4O15439 1325 aa12.5□□□□□ -0.41
CTNND1-228ENST00000531007 THSD7AQ9UPZ6 1657 aa12.5□□□□□ -0.41
CTNND1-228ENST00000531007 UBR2Q8IWV8 1755 aa12.5□□□□□ -0.41
CTNND1-228ENST00000531007 KCNQ3O43525 872 aa12.49□□□□□ -0.41
CTNND1-228ENST00000531007 FAM98CQ17RN3 349 aaKnown RBP12.49□□□□□ -0.41
CTNND1-228ENST00000531007 TOGARAM1Q9Y4F4 1720 aa12.48□□□□□ -0.41
CTNND1-228ENST00000531007 PXDNLA1KZ92 1463 aa12.48□□□□□ -0.41
CTNND1-228ENST00000531007 CCT4P50991 539 aaKnown RBP12.48□□□□□ -0.41
CTNND1-228ENST00000531007 FLIIQ13045 1269 aa12.48□□□□□ -0.41
CTNND1-228ENST00000531007 INTS3Q68E01 1043 aaKnown RBP12.48□□□□□ -0.41
CTNND1-228ENST00000531007 MARCH10Q8NA82 808 aaPredicted RBP12.48□□□□□ -0.41
CTNND1-228ENST00000531007 PANK1Q8TE04 598 aa12.48□□□□□ -0.41
CTNND1-228ENST00000531007 CLUAP1Q96AJ1 413 aa12.48□□□□□ -0.41
CTNND1-228ENST00000531007 ZNF496Q96IT1 587 aaPredicted RBP12.48□□□□□ -0.41
CTNND1-228ENST00000531007 DDX21Q9NR30 783 aaKnown RBP eCLIP12.48□□□□□ -0.41
CTNND1-228ENST00000531007 IBTKQ9P2D0 1353 aaPredicted RBP12.47□□□□□ -0.41
CTNND1-228ENST00000531007 DDX58O95786 925 aaKnown RBP12.47□□□□□ -0.41
CTNND1-228ENST00000531007 HOXB3P14651 431 aaPredicted RBP12.47□□□□□ -0.41
CTNND1-228ENST00000531007 RBM6P78332 1123 aaKnown RBP12.47□□□□□ -0.41
CTNND1-228ENST00000531007 SLC39A6Q13433 755 aa12.47□□□□□ -0.41
CTNND1-228ENST00000531007 PIGBQ92521 554 aa12.47□□□□□ -0.41
CTNND1-228ENST00000531007 SMARCC1Q92922 1105 aaPredicted RBP12.47□□□□□ -0.41
CTNND1-228ENST00000531007 COG6Q9Y2V7 657 aa12.47□□□□□ -0.41
CTNND1-228ENST00000531007 GLI3P10071 1580 aa12.47□□□□□ -0.41
CTNND1-228ENST00000531007 KCPQ6ZWJ8 1503 aa12.47□□□□□ -0.41
CTNND1-228ENST00000531007 ITGB4P16144 1822 aa12.46□□□□□ -0.41
CTNND1-228ENST00000531007 LAMB4A4D0S4 1761 aa12.46□□□□□ -0.41
CTNND1-228ENST00000531007 RIMBP2O15034 1052 aa12.46□□□□□ -0.41
CTNND1-228ENST00000531007 RLBP1P12271 317 aa12.46□□□□□ -0.41
CTNND1-228ENST00000531007 EIF2S2P20042 333 aaKnown RBP12.46□□□□□ -0.41
CTNND1-228ENST00000531007 HMGB2P26583 209 aaKnown RBP12.46□□□□□ -0.41
CTNND1-228ENST00000531007 ITPRIPQ8IWB1 547 aa12.46□□□□□ -0.41
CTNND1-228ENST00000531007 ZNF710Q8N1W2 664 aa12.46□□□□□ -0.41
CTNND1-228ENST00000531007 TMC2Q8TDI7 906 aa12.46□□□□□ -0.41
CTNND1-228ENST00000531007 STARD3NLO95772 234 aa12.45□□□□□ -0.42
CTNND1-228ENST00000531007 FKBP5Q13451 457 aaPredicted RBP12.45□□□□□ -0.42
CTNND1-228ENST00000531007 TMEM57Q8N5G2 664 aa12.45□□□□□ -0.42
CTNND1-228ENST00000531007 ATG3Q9NT62 314 aa12.45□□□□□ -0.42
CTNND1-228ENST00000531007 CHPF2Q9P2E5 772 aa12.45□□□□□ -0.42
CTNND1-228ENST00000531007 RGS12O14924 1447 aa12.45□□□□□ -0.42
CTNND1-228ENST00000531007 C2orf72A6NCS6 295 aa12.44□□□□□ -0.42
CTNND1-228ENST00000531007 TCERG1O14776 1098 aaKnown RBP12.44□□□□□ -0.42
CTNND1-228ENST00000531007 KIF3CO14782 793 aa12.44□□□□□ -0.42
CTNND1-228ENST00000531007 PRIM1P49642 420 aaKnown RBP12.44□□□□□ -0.42
CTNND1-228ENST00000531007 HDAC5Q9UQL6 1122 aa12.44□□□□□ -0.42
CTNND1-228ENST00000531007 DOT1LQ8TEK3 1739 aa12.44□□□□□ -0.42
CTNND1-228ENST00000531007 ZNF831Q5JPB2 1677 aa12.43□□□□□ -0.42
CTNND1-228ENST00000531007 A0A0G2JS52 829 aa12.43□□□□□ -0.42
CTNND1-228ENST00000531007 ZBTB7BO15156 539 aaPredicted RBP12.43□□□□□ -0.42
CTNND1-228ENST00000531007 GTPBP6O43824 516 aaPredicted RBP12.43□□□□□ -0.42
CTNND1-228ENST00000531007 MYT1Q01538 1121 aa12.43□□□□□ -0.42
CTNND1-228ENST00000531007 CENPQQ7L2Z9 268 aaPredicted RBP12.43□□□□□ -0.42
CTNND1-228ENST00000531007 ZBTB40Q9NUA8 1239 aa12.43□□□□□ -0.42
CTNND1-228ENST00000531007 ATP10DQ9P241 1426 aa12.43□□□□□ -0.42
CTNND1-228ENST00000531007 C5P01031 1676 aa12.42□□□□□ -0.42
CTNND1-228ENST00000531007 CICQ96RK0 1608 aaPredicted RBP12.42□□□□□ -0.42
CTNND1-228ENST00000531007 PDIA6Q15084 440 aa12.42□□□□□ -0.42
CTNND1-228ENST00000531007 KSR2Q6VAB6 950 aa12.42□□□□□ -0.42
CTNND1-228ENST00000531007 SYTL4Q96C24 671 aaPredicted RBP12.42□□□□□ -0.42
CTNND1-228ENST00000531007 N4BP2Q86UW6 1770 aaPredicted RBP12.41□□□□□ -0.42
CTNND1-228ENST00000531007 GNAI3P08754 354 aa12.41□□□□□ -0.42
CTNND1-228ENST00000531007 B4GALNT3Q6L9W6 998 aa12.41□□□□□ -0.42
CTNND1-228ENST00000531007 G2E3Q7L622 706 aa12.41□□□□□ -0.42
CTNND1-228ENST00000531007 SEPT12Q8IYM1 358 aa12.41□□□□□ -0.42
CTNND1-228ENST00000531007 NECTIN2Q92692 538 aa12.41□□□□□ -0.42
CTNND1-228ENST00000531007 RWDD1Q9H446 243 aaPredicted RBP12.41□□□□□ -0.42
CTNND1-228ENST00000531007 ASAP1Q9ULH1 1129 aa12.41□□□□□ -0.42
CTNND1-228ENST00000531007 USP16Q9Y5T5 823 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms