RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 L3MBTL3Q96JM7 780 aaPredicted RBP7.25□□□□□ -1.25
VPS11-204ENST00000530809 BRIP1Q9BX63 1249 aa7.25□□□□□ -1.25
VPS11-204ENST00000530809 SLC52A2Q9HAB3 445 aa7.25□□□□□ -1.25
VPS11-204ENST00000530809 WBP1LQ9NX94 342 aa7.25□□□□□ -1.25
VPS11-204ENST00000530809 RASSF10A6NK89 507 aa7.24□□□□□ -1.25
VPS11-204ENST00000530809 ABCB7O75027 752 aa7.24□□□□□ -1.25
VPS11-204ENST00000530809 DDNO94850 711 aaPredicted RBP7.24□□□□□ -1.25
VPS11-204ENST00000530809 TNNT2P45379 298 aaPredicted RBP7.24□□□□□ -1.25
VPS11-204ENST00000530809 VEGFBP49765 207 aa7.24□□□□□ -1.25
VPS11-204ENST00000530809 LBX1P52954 281 aa7.24□□□□□ -1.25
VPS11-204ENST00000530809 CNKSR1Q969H4 720 aa7.24□□□□□ -1.25
VPS11-204ENST00000530809 ABHD8Q96I13 439 aa7.24□□□□□ -1.25
VPS11-204ENST00000530809 BCL2L12Q9HB09 334 aa7.24□□□□□ -1.25
VPS11-204ENST00000530809 ZBTB1Q9Y2K1 713 aa7.24□□□□□ -1.25
VPS11-204ENST00000530809 STARD3NLO95772 234 aa7.23□□□□□ -1.25
VPS11-204ENST00000530809 ITGBL1O95965 494 aaPredicted RBP7.23□□□□□ -1.25
VPS11-204ENST00000530809 POTEIP0CG38 1075 aa7.23□□□□□ -1.25
VPS11-204ENST00000530809 POTEJP0CG39 1038 aa7.23□□□□□ -1.25
VPS11-204ENST00000530809 HSPA8P11142 646 aaKnown RBP7.23□□□□□ -1.25
VPS11-204ENST00000530809 MLLT1Q03111 559 aaPredicted RBP7.23□□□□□ -1.25
VPS11-204ENST00000530809 DEFB115Q30KQ5 88 aa7.23□□□□□ -1.25
VPS11-204ENST00000530809 SULT6B1Q6IMI4 303 aa7.23□□□□□ -1.25
VPS11-204ENST00000530809 STYK1Q6J9G0 422 aa7.23□□□□□ -1.25
VPS11-204ENST00000530809 PNMA8AQ86V59 439 aaPredicted RBP7.23□□□□□ -1.25
VPS11-204ENST00000530809 YTHDC1Q96MU7 727 aaKnown RBP7.23□□□□□ -1.25
VPS11-204ENST00000530809 TAF1DQ9H5J8 278 aaPredicted RBP7.23□□□□□ -1.25
VPS11-204ENST00000530809 NPHP1O15259 732 aa7.22□□□□□ -1.25
VPS11-204ENST00000530809 RNMTO43148 476 aaKnown RBP7.22□□□□□ -1.25
VPS11-204ENST00000530809 RGS19P49795 217 aa7.22□□□□□ -1.25
VPS11-204ENST00000530809 EIF5P55010 431 aaKnown RBP7.22□□□□□ -1.25
VPS11-204ENST00000530809 ST5P78524 1137 aa7.22□□□□□ -1.25
VPS11-204ENST00000530809 PRR5LQ6MZQ0 368 aa7.22□□□□□ -1.25
VPS11-204ENST00000530809 PRPF40BQ6NWY9 871 aaKnown RBP7.22□□□□□ -1.25
VPS11-204ENST00000530809 BICDL1Q6ZP65 573 aa7.22□□□□□ -1.25
VPS11-204ENST00000530809 NPM2Q86SE8 214 aaKnown RBP7.22□□□□□ -1.25
VPS11-204ENST00000530809 AEBP1Q8IUX7 1158 aa7.22□□□□□ -1.25
VPS11-204ENST00000530809 MASTLQ96GX5 879 aa7.22□□□□□ -1.25
VPS11-204ENST00000530809 BEGAINQ9BUH8 593 aa7.22□□□□□ -1.25
VPS11-204ENST00000530809 TEX13AQ9BXU3 409 aaPredicted RBP7.22□□□□□ -1.25
VPS11-204ENST00000530809 HACL1Q9UJ83 578 aa7.22□□□□□ -1.25
VPS11-204ENST00000530809 ZBTB12Q9Y330 459 aaPredicted RBP7.22□□□□□ -1.25
VPS11-204ENST00000530809 KIF7Q2M1P5 1343 aa7.22□□□□□ -1.25
VPS11-204ENST00000530809 WDR33Q9C0J8 1336 aaKnown RBP7.22□□□□□ -1.25
VPS11-204ENST00000530809 SRGNP10124 158 aa7.21□□□□□ -1.26
VPS11-204ENST00000530809 CANXP27824 592 aaKnown RBP7.21□□□□□ -1.26
VPS11-204ENST00000530809 EPHX2P34913 555 aa7.21□□□□□ -1.26
VPS11-204ENST00000530809 ECE1P42892 770 aa7.21□□□□□ -1.26
VPS11-204ENST00000530809 SLC39A6Q13433 755 aa7.21□□□□□ -1.26
VPS11-204ENST00000530809 CCDC93Q567U6 631 aa7.21□□□□□ -1.26
VPS11-204ENST00000530809 EAPPQ56P03 285 aaPredicted RBP7.21□□□□□ -1.26
VPS11-204ENST00000530809 TBC1D9BQ66K14 1250 aa7.21□□□□□ -1.26
VPS11-204ENST00000530809 TTC5Q8N0Z6 440 aa7.21□□□□□ -1.26
VPS11-204ENST00000530809 CNBD1Q8NA66 436 aa7.21□□□□□ -1.26
VPS11-204ENST00000530809 SETDB2Q96T68 719 aa7.21□□□□□ -1.26
VPS11-204ENST00000530809 RTN4Q9NQC3 1192 aaKnown RBP7.21□□□□□ -1.26
VPS11-204ENST00000530809 CLEC11AQ9Y240 323 aa7.21□□□□□ -1.26
VPS11-204ENST00000530809 LTBP1Q14766 1721 aa7.21□□□□□ -1.26
VPS11-204ENST00000530809 IL6STP40189 918 aaPredicted RBP7.2□□□□□ -1.26
VPS11-204ENST00000530809 FKBP4Q02790 459 aaKnown RBP eCLIP7.2□□□□□ -1.26
VPS11-204ENST00000530809 CNTROBQ8N137 903 aa7.2□□□□□ -1.26
VPS11-204ENST00000530809 LGR6Q9HBX8 967 aa7.2□□□□□ -1.26
VPS11-204ENST00000530809 ABT1Q9ULW3 272 aaKnown RBP7.2□□□□□ -1.26
VPS11-204ENST00000530809 HEG1Q9ULI3 1381 aa7.2□□□□□ -1.26
VPS11-204ENST00000530809 CASP8AP2Q9UKL3 1982 aa7.19□□□□□ -1.26
VPS11-204ENST00000530809 LAMB4A4D0S4 1761 aa7.19□□□□□ -1.26
VPS11-204ENST00000530809 CCDC85CA6NKD9 419 aa7.19□□□□□ -1.26
VPS11-204ENST00000530809 CA12O43570 354 aa7.19□□□□□ -1.26
VPS11-204ENST00000530809 NPR1P16066 1061 aa7.19□□□□□ -1.26
VPS11-204ENST00000530809 IL13P35225 146 aa7.19□□□□□ -1.26
VPS11-204ENST00000530809 MORC1Q86VD1 984 aa7.19□□□□□ -1.26
VPS11-204ENST00000530809 RTKN2Q8IZC4 609 aa7.19□□□□□ -1.26
VPS11-204ENST00000530809 GPC2Q8N158 579 aa7.19□□□□□ -1.26
VPS11-204ENST00000530809 GTF3C3Q9Y5Q9 886 aa7.19□□□□□ -1.26
VPS11-204ENST00000530809 NUP98P52948 1817 aa7.18□□□□□ -1.26
VPS11-204ENST00000530809 FZD9O00144 591 aa7.18□□□□□ -1.26
VPS11-204ENST00000530809 RGL2O15211 777 aa7.18□□□□□ -1.26
VPS11-204ENST00000530809 DSG3P32926 999 aa7.18□□□□□ -1.26
VPS11-204ENST00000530809 CLEC4GQ6UXB4 293 aa7.18□□□□□ -1.26
VPS11-204ENST00000530809 C7orf43Q8WVR3 580 aa7.18□□□□□ -1.26
VPS11-204ENST00000530809 CAPNS2Q96L46 248 aa7.18□□□□□ -1.26
VPS11-204ENST00000530809 DDX21Q9NR30 783 aaKnown RBP eCLIP7.18□□□□□ -1.26
VPS11-204ENST00000530809 FBXO3Q9UK99 471 aa7.18□□□□□ -1.26
VPS11-204ENST00000530809 TBC1D2BQ9UPU7 963 aa7.18□□□□□ -1.26
VPS11-204ENST00000530809 ZNF652Q9Y2D9 606 aa7.18□□□□□ -1.26
VPS11-204ENST00000530809 ZNF330Q9Y3S2 320 aaPredicted RBP7.18□□□□□ -1.26
VPS11-204ENST00000530809 AKAP11Q9UKA4 1901 aa7.18□□□□□ -1.26
VPS11-204ENST00000530809 RNF123Q5XPI4 1314 aa7.18□□□□□ -1.26
VPS11-204ENST00000530809 ZNF541Q9H0D2 1346 aa7.18□□□□□ -1.26
VPS11-204ENST00000530809 CAMTA2O94983 1202 aa7.17□□□□□ -1.26
VPS11-204ENST00000530809 LMOD1P29536 600 aaPredicted RBP7.17□□□□□ -1.26
VPS11-204ENST00000530809 ALDH1B1P30837 517 aa7.17□□□□□ -1.26
VPS11-204ENST00000530809 MAP2K2P36507 400 aa7.17□□□□□ -1.26
VPS11-204ENST00000530809 IARSP41252 1262 aaKnown RBP7.17□□□□□ -1.26
VPS11-204ENST00000530809 TEFQ10587 303 aa7.17□□□□□ -1.26
VPS11-204ENST00000530809 GRIPAP1Q4V328 841 aa7.17□□□□□ -1.26
VPS11-204ENST00000530809 MAP1SQ66K74 1059 aaPredicted RBP7.17□□□□□ -1.26
VPS11-204ENST00000530809 ZNF790Q6PG37 636 aa7.17□□□□□ -1.26
VPS11-204ENST00000530809 NBPF5PQ86XG9 351 aaPredicted RBP7.17□□□□□ -1.26
VPS11-204ENST00000530809 DZIP3Q86Y13 1208 aaKnown RBP7.17□□□□□ -1.26
VPS11-204ENST00000530809 CCDC24Q8N4L8 307 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms