RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 MAP3K15Q6ZN16 1313 aa27.41■■□□□ 1.98
CAPN1-220ENST00000530567 ARXQ96QS3 562 aa27.41■■□□□ 1.98
CAPN1-220ENST00000530567 CT47B1P0C2W7 299 aaPredicted RBP27.4■■□□□ 1.98
CAPN1-220ENST00000530567 LRP5O75197 1615 aa27.39■■□□□ 1.98
CAPN1-220ENST00000530567 SLC4A2P04920 1241 aa27.39■■□□□ 1.97
CAPN1-220ENST00000530567 AIMP1Q12904 312 aaKnown RBP27.39■■□□□ 1.97
CAPN1-220ENST00000530567 HLFQ16534 295 aa27.39■■□□□ 1.97
CAPN1-220ENST00000530567 KIF6Q6ZMV9 814 aa27.39■■□□□ 1.97
CAPN1-220ENST00000530567 G2E3Q7L622 706 aa27.39■■□□□ 1.97
CAPN1-220ENST00000530567 NLGN1Q8N2Q7 840 aa27.39■■□□□ 1.97
CAPN1-220ENST00000530567 SPON1Q9HCB6 807 aa27.39■■□□□ 1.97
CAPN1-220ENST00000530567 ERVV-1B6SEH8 477 aa27.38■■□□□ 1.97
CAPN1-220ENST00000530567 RGL2O15211 777 aa27.38■■□□□ 1.97
CAPN1-220ENST00000530567 NUP98P52948 1817 aa27.38■■□□□ 1.97
CAPN1-220ENST00000530567 ZNF428Q96B54 188 aa27.38■■□□□ 1.97
CAPN1-220ENST00000530567 ZBTB3Q9H5J0 574 aa27.38■■□□□ 1.97
CAPN1-220ENST00000530567 SSH1Q8WYL5 1049 aa27.36■■□□□ 1.97
CAPN1-220ENST00000530567 ARFGEF2Q9Y6D5 1785 aa27.35■■□□□ 1.97
CAPN1-220ENST00000530567 NFIXQ14938 502 aa27.35■■□□□ 1.97
CAPN1-220ENST00000530567 CLEC4GQ6UXB4 293 aa27.35■■□□□ 1.97
CAPN1-220ENST00000530567 MMP10P09238 476 aa27.34■■□□□ 1.97
CAPN1-220ENST00000530567 TM4SF1P30408 202 aa27.34■■□□□ 1.97
CAPN1-220ENST00000530567 DDR1Q08345 913 aa27.34■■□□□ 1.97
CAPN1-220ENST00000530567 TBC1D9BQ66K14 1250 aa27.34■■□□□ 1.97
CAPN1-220ENST00000530567 FLIIQ13045 1269 aa27.33■■□□□ 1.97
CAPN1-220ENST00000530567 MRPL50Q8N5N7 158 aaKnown RBP27.33■■□□□ 1.97
CAPN1-220ENST00000530567 PLBD2Q8NHP8 589 aa27.33■■□□□ 1.97
CAPN1-220ENST00000530567 ATP10DQ9P241 1426 aa27.33■■□□□ 1.97
CAPN1-220ENST00000530567 ALDH1L2Q3SY69 923 aa27.33■■□□□ 1.96
CAPN1-220ENST00000530567 GIGYF2Q6Y7W6 1299 aaKnown RBP27.33■■□□□ 1.96
CAPN1-220ENST00000530567 BCL2L13Q9BXK5 485 aa27.33■■□□□ 1.96
CAPN1-220ENST00000530567 ZNF652Q9Y2D9 606 aa27.33■■□□□ 1.96
CAPN1-220ENST00000530567 SRCAPQ6ZRS2 3230 aa27.32■■□□□ 1.96
CAPN1-220ENST00000530567 ANKRD36CQ5JPF3 1778 aa27.32■■□□□ 1.96
CAPN1-220ENST00000530567 RARSP54136 660 aaKnown RBP27.32■■□□□ 1.96
CAPN1-220ENST00000530567 ANKRD13DQ6ZTN6 518 aa27.32■■□□□ 1.96
CAPN1-220ENST00000530567 ADCY9O60503 1353 aa27.31■■□□□ 1.96
CAPN1-220ENST00000530567 POLRMTO00411 1230 aaKnown RBP27.3■■□□□ 1.96
CAPN1-220ENST00000530567 POLD1P28340 1107 aa27.3■■□□□ 1.96
CAPN1-220ENST00000530567 NRXN2Q9P2S2 1712 aa27.29■■□□□ 1.96
CAPN1-220ENST00000530567 BICDL1Q6ZP65 573 aa27.29■■□□□ 1.96
CAPN1-220ENST00000530567 SMC4Q9NTJ3 1288 aa27.29■■□□□ 1.96
CAPN1-220ENST00000530567 AFDNP55196 1824 aaKnown RBP27.29■■□□□ 1.96
CAPN1-220ENST00000530567 ZNF34Q8IZ26 560 aa27.27■■□□□ 1.96
CAPN1-220ENST00000530567 NIP7Q9Y221 180 aaKnown RBP eCLIP27.27■■□□□ 1.96
CAPN1-220ENST00000530567 CARMIL3Q8ND23 1372 aa27.27■■□□□ 1.96
CAPN1-220ENST00000530567 UBN2Q6ZU65 1347 aa27.27■■□□□ 1.96
CAPN1-220ENST00000530567 PI4KAP2A4QPH2 592 aa27.26■■□□□ 1.95
CAPN1-220ENST00000530567 DDX58O95786 925 aaKnown RBP27.26■■□□□ 1.95
CAPN1-220ENST00000530567 BRPF1P55201 1214 aaPredicted RBP27.26■■□□□ 1.95
CAPN1-220ENST00000530567 KSR2Q6VAB6 950 aa27.26■■□□□ 1.95
CAPN1-220ENST00000530567 RIC3Q7Z5B4 369 aa27.26■■□□□ 1.95
CAPN1-220ENST00000530567 PI4KAP1Q8N8J0 262 aa27.26■■□□□ 1.95
CAPN1-220ENST00000530567 FKBP5Q13451 457 aaPredicted RBP27.25■■□□□ 1.95
CAPN1-220ENST00000530567 TCIRG1Q13488 830 aa27.25■■□□□ 1.95
CAPN1-220ENST00000530567 SETDB2Q96T68 719 aa27.25■■□□□ 1.95
CAPN1-220ENST00000530567 GPTP24298 496 aa27.24■■□□□ 1.95
CAPN1-220ENST00000530567 MAP3K2Q9Y2U5 619 aa27.24■■□□□ 1.95
CAPN1-220ENST00000530567 PARP3Q9Y6F1 533 aa27.24■■□□□ 1.95
CAPN1-220ENST00000530567 HSP90AB3PQ58FF7 597 aa27.24■■□□□ 1.95
CAPN1-220ENST00000530567 SERPINB2P05120 415 aa27.23■■□□□ 1.95
CAPN1-220ENST00000530567 ISCA1Q9BUE6 129 aa27.23■■□□□ 1.95
CAPN1-220ENST00000530567 METTL22Q9BUU2 404 aaPredicted RBP27.23■■□□□ 1.95
CAPN1-220ENST00000530567 C10orf71Q711Q0 1435 aa27.22■■□□□ 1.95
CAPN1-220ENST00000530567 BCAR3O75815 825 aa27.22■■□□□ 1.95
CAPN1-220ENST00000530567 KIF13BQ9NQT8 1826 aa27.21■■□□□ 1.95
CAPN1-220ENST00000530567 PTPRCP08575 1304 aa27.21■■□□□ 1.95
CAPN1-220ENST00000530567 F6X3S4 739 aa27.2■■□□□ 1.94
CAPN1-220ENST00000530567 NLRP10Q86W26 655 aa27.2■■□□□ 1.94
CAPN1-220ENST00000530567 IBTKQ9P2D0 1353 aaPredicted RBP27.2■■□□□ 1.94
CAPN1-220ENST00000530567 ATP5J2-PTCD1G3V325 749 aa27.19■■□□□ 1.94
CAPN1-220ENST00000530567 SUSD4Q5VX71 490 aa27.19■■□□□ 1.94
CAPN1-220ENST00000530567 DNAAF4Q8WXU2 420 aa27.19■■□□□ 1.94
CAPN1-220ENST00000530567 MYD88Q99836 296 aa27.19■■□□□ 1.94
CAPN1-220ENST00000530567 TRIM28Q13263 835 aaKnown RBP27.18■■□□□ 1.94
CAPN1-220ENST00000530567 PARP10Q53GL7 1025 aa27.18■■□□□ 1.94
CAPN1-220ENST00000530567 PRR5LQ6MZQ0 368 aa27.18■■□□□ 1.94
CAPN1-220ENST00000530567 NOB1Q9ULX3 412 aaKnown RBP27.18■■□□□ 1.94
CAPN1-220ENST00000530567 IGKV5-2P06315 115 aa27.17■■□□□ 1.94
CAPN1-220ENST00000530567 PPP1R1BQ9UD71 204 aaPredicted RBP27.17■■□□□ 1.94
CAPN1-220ENST00000530567 KIF16BQ96L93 1317 aa27.17■■□□□ 1.94
CAPN1-220ENST00000530567 NTSR2O95665 410 aa27.16■■□□□ 1.94
CAPN1-220ENST00000530567 NBPF5PQ86XG9 351 aaPredicted RBP27.16■■□□□ 1.94
CAPN1-220ENST00000530567 ANKRD31Q8N7Z5 1873 aa27.16■■□□□ 1.94
CAPN1-220ENST00000530567 FAM177BA6PVY3 158 aa27.16■■□□□ 1.94
CAPN1-220ENST00000530567 CNBD1Q8NA66 436 aa27.16■■□□□ 1.94
CAPN1-220ENST00000530567 KIAA1551Q9HCM1 1747 aa27.15■■□□□ 1.94
CAPN1-220ENST00000530567 FHDC1Q9C0D6 1143 aaPredicted RBP27.15■■□□□ 1.94
CAPN1-220ENST00000530567 ABCC12Q96J65 1359 aa27.14■■□□□ 1.93
CAPN1-220ENST00000530567 CCDC24Q8N4L8 307 aa27.14■■□□□ 1.93
CAPN1-220ENST00000530567 RCAN3Q9UKA8 241 aa27.14■■□□□ 1.93
CAPN1-220ENST00000530567 PXDNLA1KZ92 1463 aa27.13■■□□□ 1.93
CAPN1-220ENST00000530567 CWF19L2Q2TBE0 894 aaKnown RBP27.13■■□□□ 1.93
CAPN1-220ENST00000530567 BEND3Q5T5X7 828 aa27.13■■□□□ 1.93
CAPN1-220ENST00000530567 NUTM1Q86Y26 1132 aa27.13■■□□□ 1.93
CAPN1-220ENST00000530567 NYXQ9GZU5 481 aa27.13■■□□□ 1.93
CAPN1-220ENST00000530567 CD2APQ9Y5K6 639 aa27.13■■□□□ 1.93
CAPN1-220ENST00000530567 N4BP2Q86UW6 1770 aaPredicted RBP27.12■■□□□ 1.93
CAPN1-220ENST00000530567 NEURL1BA8MQ27 555 aa27.12■■□□□ 1.93
CAPN1-220ENST00000530567 NEXNQ0ZGT2 675 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms