RNA–Protein interactions for RNA: ENST00000530345.1

NUP98-217, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-217ENST00000530345 ZNF652Q9Y2D9 606 aa10.04□□□□□ -0.8
NUP98-217ENST00000530345 THSD7BQ9C0I4 1608 aa10.04□□□□□ -0.8
NUP98-217ENST00000530345 CNTNAP1P78357 1384 aa10.03□□□□□ -0.8
NUP98-217ENST00000530345 POTECB2RU33 542 aa10.03□□□□□ -0.8
NUP98-217ENST00000530345 SRGNP10124 158 aa10.03□□□□□ -0.8
NUP98-217ENST00000530345 PDE4DIPQ5VU43 2346 aa10.03□□□□□ -0.8
NUP98-217ENST00000530345 ZNF496Q96IT1 587 aaPredicted RBP10.03□□□□□ -0.8
NUP98-217ENST00000530345 PRDM10Q9NQV6 1147 aa10.03□□□□□ -0.8
NUP98-217ENST00000530345 KDM3BQ7LBC6 1761 aa10.02□□□□□ -0.81
NUP98-217ENST00000530345 C21orf2O43822 256 aa10.02□□□□□ -0.81
NUP98-217ENST00000530345 CCDC93Q567U6 631 aa10.02□□□□□ -0.81
NUP98-217ENST00000530345 PRPF40BQ6NWY9 871 aaKnown RBP10.02□□□□□ -0.81
NUP98-217ENST00000530345 BICDL1Q6ZP65 573 aa10.02□□□□□ -0.81
NUP98-217ENST00000530345 PASKQ96RG2 1323 aa10.02□□□□□ -0.81
NUP98-217ENST00000530345 CAMTA2O94983 1202 aa10.01□□□□□ -0.81
NUP98-217ENST00000530345 NPR1P16066 1061 aa10.01□□□□□ -0.81
NUP98-217ENST00000530345 AIDAQ96BJ3 306 aa10.01□□□□□ -0.81
NUP98-217ENST00000530345 KIF7Q2M1P5 1343 aa10.01□□□□□ -0.81
NUP98-217ENST00000530345 RIC1Q4ADV7 1423 aa10□□□□□ -0.81
NUP98-217ENST00000530345 CAPN15O75808 1086 aa10□□□□□ -0.81
NUP98-217ENST00000530345 GRIPAP1Q4V328 841 aa10□□□□□ -0.81
NUP98-217ENST00000530345 PNMA8AQ86V59 439 aaPredicted RBP10□□□□□ -0.81
NUP98-217ENST00000530345 NBPF5PQ86XG9 351 aaPredicted RBP10□□□□□ -0.81
NUP98-217ENST00000530345 DZIP3Q86Y13 1208 aaKnown RBP10□□□□□ -0.81
NUP98-217ENST00000530345 RTKN2Q8IZC4 609 aa10□□□□□ -0.81
NUP98-217ENST00000530345 TBC1D2BQ9UPU7 963 aa10□□□□□ -0.81
NUP98-217ENST00000530345 ZNF330Q9Y3S2 320 aaPredicted RBP10□□□□□ -0.81
NUP98-217ENST00000530345 ANKRD36CQ5JPF3 1778 aa10□□□□□ -0.81
NUP98-217ENST00000530345 KLRG2A4D1S0 409 aaPredicted RBP9.99□□□□□ -0.81
NUP98-217ENST00000530345 TMEM88BA6NKF7 163 aa9.99□□□□□ -0.81
NUP98-217ENST00000530345 PER1O15534 1290 aaPredicted RBP9.99□□□□□ -0.81
NUP98-217ENST00000530345 CTCFP49711 727 aaPredicted RBP9.99□□□□□ -0.81
NUP98-217ENST00000530345 FKBP4Q02790 459 aaKnown RBP eCLIP9.99□□□□□ -0.81
NUP98-217ENST00000530345 CC2D2BQ6DHV5 1058 aa9.99□□□□□ -0.81
NUP98-217ENST00000530345 TPTE2Q6XPS3 522 aa9.99□□□□□ -0.81
NUP98-217ENST00000530345 IL17REQ8NFR9 667 aa9.99□□□□□ -0.81
NUP98-217ENST00000530345 CFAP53Q96M91 514 aa9.99□□□□□ -0.81
NUP98-217ENST00000530345 TAF1DQ9H5J8 278 aaPredicted RBP9.99□□□□□ -0.81
NUP98-217ENST00000530345 IBTKQ9P2D0 1353 aaPredicted RBP9.99□□□□□ -0.81
NUP98-217ENST00000530345 BTBD11A6QL63 1104 aa9.98□□□□□ -0.81
NUP98-217ENST00000530345 DDNO94850 711 aaPredicted RBP9.98□□□□□ -0.81
NUP98-217ENST00000530345 SNRPA1P09661 255 aaKnown RBP9.98□□□□□ -0.81
NUP98-217ENST00000530345 ALDH1B1P30837 517 aa9.98□□□□□ -0.81
NUP98-217ENST00000530345 C7orf43Q8WVR3 580 aa9.98□□□□□ -0.81
NUP98-217ENST00000530345 HACL1Q9UJ83 578 aa9.98□□□□□ -0.81
NUP98-217ENST00000530345 U2SURPO15042 1029 aaKnown RBP9.97□□□□□ -0.81
NUP98-217ENST00000530345 HTATSF1O43719 755 aaKnown RBP9.97□□□□□ -0.81
NUP98-217ENST00000530345 GPC2Q8N158 579 aa9.97□□□□□ -0.81
NUP98-217ENST00000530345 RTF1Q92541 710 aaKnown RBP9.97□□□□□ -0.81
NUP98-217ENST00000530345 PSMD1Q99460 953 aa9.97□□□□□ -0.81
NUP98-217ENST00000530345 PCGF6Q9BYE7 350 aa9.97□□□□□ -0.81
NUP98-217ENST00000530345 NYXQ9GZU5 481 aa9.97□□□□□ -0.81
NUP98-217ENST00000530345 MKRN1Q9UHC7 482 aaKnown RBP9.97□□□□□ -0.81
NUP98-217ENST00000530345 NUDCQ9Y266 331 aa9.97□□□□□ -0.81
NUP98-217ENST00000530345 LAMB2P55268 1798 aa9.96□□□□□ -0.81
NUP98-217ENST00000530345 AKAP11Q9UKA4 1901 aa9.96□□□□□ -0.81
NUP98-217ENST00000530345 RASSF10A6NK89 507 aa9.96□□□□□ -0.82
NUP98-217ENST00000530345 A1BGP04217 495 aa9.96□□□□□ -0.82
NUP98-217ENST00000530345 MAP2K1Q02750 393 aaPredicted RBP9.96□□□□□ -0.82
NUP98-217ENST00000530345 CC2D1BQ5T0F9 858 aaKnown RBP9.96□□□□□ -0.82
NUP98-217ENST00000530345 ZNF219Q9P2Y4 722 aaPredicted RBP9.96□□□□□ -0.82
NUP98-217ENST00000530345 SNED1Q8TER0 1413 aa9.96□□□□□ -0.82
NUP98-217ENST00000530345 DDX60Q8IY21 1712 aaKnown RBP9.96□□□□□ -0.82
NUP98-217ENST00000530345 FZD9O00144 591 aa9.95□□□□□ -0.82
NUP98-217ENST00000530345 FOXN1O15353 648 aa9.95□□□□□ -0.82
NUP98-217ENST00000530345 ITGBL1O95965 494 aaPredicted RBP9.95□□□□□ -0.82
NUP98-217ENST00000530345 EPHX2P34913 555 aa9.95□□□□□ -0.82
NUP98-217ENST00000530345 IARSP41252 1262 aaKnown RBP9.95□□□□□ -0.82
NUP98-217ENST00000530345 JDP2Q8WYK2 163 aa9.95□□□□□ -0.82
NUP98-217ENST00000530345 RSPH6AQ9H0K4 717 aa9.95□□□□□ -0.82
NUP98-217ENST00000530345 WBP1LQ9NX94 342 aa9.95□□□□□ -0.82
NUP98-217ENST00000530345 NIP7Q9Y221 180 aaKnown RBP eCLIP9.95□□□□□ -0.82
NUP98-217ENST00000530345 POLR2AP24928 1970 aaKnown RBP9.95□□□□□ -0.82
NUP98-217ENST00000530345 CASP8AP2Q9UKL3 1982 aa9.94□□□□□ -0.82
NUP98-217ENST00000530345 POTEIP0CG38 1075 aa9.94□□□□□ -0.82
NUP98-217ENST00000530345 POTEJP0CG39 1038 aa9.94□□□□□ -0.82
NUP98-217ENST00000530345 LMOD1P29536 600 aaPredicted RBP9.94□□□□□ -0.82
NUP98-217ENST00000530345 PRKAR2BP31323 418 aa9.94□□□□□ -0.82
NUP98-217ENST00000530345 CRY2Q49AN0 593 aa9.94□□□□□ -0.82
NUP98-217ENST00000530345 LTBP1Q14766 1721 aa9.93□□□□□ -0.82
NUP98-217ENST00000530345 ZNF541Q9H0D2 1346 aa9.93□□□□□ -0.82
NUP98-217ENST00000530345 ERVV-1B6SEH8 477 aa9.93□□□□□ -0.82
NUP98-217ENST00000530345 KCNA4P22459 653 aa9.93□□□□□ -0.82
NUP98-217ENST00000530345 GTF2E1P29083 439 aaPredicted RBP9.93□□□□□ -0.82
NUP98-217ENST00000530345 ECE1P42892 770 aa9.93□□□□□ -0.82
NUP98-217ENST00000530345 VEGFBP49765 207 aa9.93□□□□□ -0.82
NUP98-217ENST00000530345 EIF6P56537 245 aaKnown RBP9.93□□□□□ -0.82
NUP98-217ENST00000530345 DEFB115Q30KQ5 88 aa9.93□□□□□ -0.82
NUP98-217ENST00000530345 EAPPQ56P03 285 aaPredicted RBP9.93□□□□□ -0.82
NUP98-217ENST00000530345 CCDC24Q8N4L8 307 aa9.93□□□□□ -0.82
NUP98-217ENST00000530345 CCER1Q8TC90 406 aaPredicted RBP9.93□□□□□ -0.82
NUP98-217ENST00000530345 PNISRQ8TF01 805 aaKnown RBP9.93□□□□□ -0.82
NUP98-217ENST00000530345 VPS33BQ9H267 617 aa9.93□□□□□ -0.82
NUP98-217ENST00000530345 ZNF277Q9NRM2 450 aaPredicted RBP9.93□□□□□ -0.82
NUP98-217ENST00000530345 USP16Q9Y5T5 823 aa9.93□□□□□ -0.82
NUP98-217ENST00000530345 ERBB4Q15303 1308 aa9.92□□□□□ -0.82
NUP98-217ENST00000530345 NEFMP07197 916 aa9.92□□□□□ -0.82
NUP98-217ENST00000530345 CNTROBQ8N137 903 aa9.92□□□□□ -0.82
NUP98-217ENST00000530345 BEGAINQ9BUH8 593 aa9.92□□□□□ -0.82
NUP98-217ENST00000530345 CLEC11AQ9Y240 323 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms