RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 NIFKQ9BYG3 293 aaKnown RBP9.96□□□□□ -0.82
CAPRIN1-208ENST00000530008 RAD51AP2Q09MP3 1159 aa9.95□□□□□ -0.82
CAPRIN1-208ENST00000530008 SF3A1Q15459 793 aaKnown RBP9.95□□□□□ -0.82
CAPRIN1-208ENST00000530008 C1orf53Q5VUE5 145 aa9.95□□□□□ -0.82
CAPRIN1-208ENST00000530008 METTL16Q86W50 562 aaKnown RBP9.95□□□□□ -0.82
CAPRIN1-208ENST00000530008 AGBL1Q96MI9 1066 aa9.95□□□□□ -0.82
CAPRIN1-208ENST00000530008 ZSCAN10Q96SZ4 725 aaPredicted RBP9.95□□□□□ -0.82
CAPRIN1-208ENST00000530008 WASF2Q9Y6W5 498 aa9.95□□□□□ -0.82
CAPRIN1-208ENST00000530008 PIK3R5Q8WYR1 880 aa9.94□□□□□ -0.82
CAPRIN1-208ENST00000530008 METTL5Q9NRN9 209 aaKnown RBP9.94□□□□□ -0.82
CAPRIN1-208ENST00000530008 PCSK2P16519 638 aa9.93□□□□□ -0.82
CAPRIN1-208ENST00000530008 FANCCQ00597 558 aa9.93□□□□□ -0.82
CAPRIN1-208ENST00000530008 NT5DC4Q86YG4 428 aa9.93□□□□□ -0.82
CAPRIN1-208ENST00000530008 TREML1Q86YW5 311 aa9.93□□□□□ -0.82
CAPRIN1-208ENST00000530008 ITPKCQ96DU7 683 aa9.93□□□□□ -0.82
CAPRIN1-208ENST00000530008 CSRNP1Q96S65 589 aa9.93□□□□□ -0.82
CAPRIN1-208ENST00000530008 CFHR5Q9BXR6 569 aa9.93□□□□□ -0.82
CAPRIN1-208ENST00000530008 GNA15P30679 374 aa9.92□□□□□ -0.82
CAPRIN1-208ENST00000530008 TMEM214Q6NUQ4 689 aaKnown RBP9.92□□□□□ -0.82
CAPRIN1-208ENST00000530008 GPR152Q8TDT2 470 aa9.92□□□□□ -0.82
CAPRIN1-208ENST00000530008 FBF1Q8TES7 1133 aa9.92□□□□□ -0.82
CAPRIN1-208ENST00000530008 UBXN4Q92575 508 aa9.92□□□□□ -0.82
CAPRIN1-208ENST00000530008 RNF34Q969K3 372 aa9.92□□□□□ -0.82
CAPRIN1-208ENST00000530008 KLF16Q9BXK1 252 aaPredicted RBP9.92□□□□□ -0.82
CAPRIN1-208ENST00000530008 PPP1R1BQ9UD71 204 aaPredicted RBP9.92□□□□□ -0.82
CAPRIN1-208ENST00000530008 ZIC2O95409 532 aaPredicted RBP9.91□□□□□ -0.82
CAPRIN1-208ENST00000530008 GTF2E1P29083 439 aaPredicted RBP9.91□□□□□ -0.82
CAPRIN1-208ENST00000530008 RELBQ01201 579 aa9.91□□□□□ -0.82
CAPRIN1-208ENST00000530008 SPRYD7Q5W111 196 aa9.91□□□□□ -0.82
CAPRIN1-208ENST00000530008 RHBDD1Q8TEB9 315 aa9.91□□□□□ -0.82
CAPRIN1-208ENST00000530008 RNF166Q96A37 237 aaPredicted RBP9.91□□□□□ -0.82
CAPRIN1-208ENST00000530008 NUDT16Q96DE0 195 aaKnown RBP9.91□□□□□ -0.82
CAPRIN1-208ENST00000530008 TXLNAP40222 546 aa9.9□□□□□ -0.82
CAPRIN1-208ENST00000530008 ORC1Q13415 861 aa9.9□□□□□ -0.82
CAPRIN1-208ENST00000530008 GGNBP2Q9H3C7 697 aa9.9□□□□□ -0.82
CAPRIN1-208ENST00000530008 ZNF395Q9H8N7 513 aaPredicted RBP9.9□□□□□ -0.82
CAPRIN1-208ENST00000530008 ZFAND3Q9H8U3 227 aa9.9□□□□□ -0.82
CAPRIN1-208ENST00000530008 FAM13BQ9NYF5 915 aa9.9□□□□□ -0.82
CAPRIN1-208ENST00000530008 BCS1LQ9Y276 419 aa9.9□□□□□ -0.82
CAPRIN1-208ENST00000530008 EIF1AYO14602 144 aaKnown RBP9.89□□□□□ -0.83
CAPRIN1-208ENST00000530008 ZNF76P36508 570 aa9.89□□□□□ -0.83
CAPRIN1-208ENST00000530008 WDR4P57081 412 aaKnown RBP9.89□□□□□ -0.83
CAPRIN1-208ENST00000530008 C8orf34Q49A92 452 aa9.89□□□□□ -0.83
CAPRIN1-208ENST00000530008 TTC16Q8NEE8 873 aa9.89□□□□□ -0.83
CAPRIN1-208ENST00000530008 SNIP1Q8TAD8 396 aaKnown RBP9.89□□□□□ -0.83
CAPRIN1-208ENST00000530008 FRMD6Q96NE9 622 aa9.89□□□□□ -0.83
CAPRIN1-208ENST00000530008 MICAL2O94851 1124 aa9.88□□□□□ -0.83
CAPRIN1-208ENST00000530008 RPLP1P05386 114 aaKnown RBP9.88□□□□□ -0.83
CAPRIN1-208ENST00000530008 NEFLP07196 543 aa9.88□□□□□ -0.83
CAPRIN1-208ENST00000530008 GNASQ5JWF2 1037 aa9.88□□□□□ -0.83
CAPRIN1-208ENST00000530008 ZNF697Q5TEC3 545 aa9.88□□□□□ -0.83
CAPRIN1-208ENST00000530008 GRIP2Q9C0E4 1043 aa9.88□□□□□ -0.83
CAPRIN1-208ENST00000530008 TGIF2Q9GZN2 237 aa9.88□□□□□ -0.83
CAPRIN1-208ENST00000530008 DNAJC25Q9H1X3 360 aa9.88□□□□□ -0.83
CAPRIN1-208ENST00000530008 AK5Q9Y6K8 562 aa9.88□□□□□ -0.83
CAPRIN1-208ENST00000530008 A6NHS1 94 aa9.87□□□□□ -0.83
CAPRIN1-208ENST00000530008 PLA2G4AP47712 749 aa9.87□□□□□ -0.83
CAPRIN1-208ENST00000530008 FOXC1Q12948 553 aa9.87□□□□□ -0.83
CAPRIN1-208ENST00000530008 RHPN1Q8TCX5 695 aa9.87□□□□□ -0.83
CAPRIN1-208ENST00000530008 CCSER2Q9H7U1 834 aa9.87□□□□□ -0.83
CAPRIN1-208ENST00000530008 PKD2L1Q9P0L9 805 aa9.87□□□□□ -0.83
CAPRIN1-208ENST00000530008 TIMP2P16035 220 aa9.86□□□□□ -0.83
CAPRIN1-208ENST00000530008 GPC1P35052 558 aa9.86□□□□□ -0.83
CAPRIN1-208ENST00000530008 HIF1AQ16665 826 aa9.86□□□□□ -0.83
CAPRIN1-208ENST00000530008 C4orf17Q53FE4 359 aa9.86□□□□□ -0.83
CAPRIN1-208ENST00000530008 SLC27A3Q5K4L6 730 aa9.86□□□□□ -0.83
CAPRIN1-208ENST00000530008 ZNF598Q86UK7 904 aaKnown RBP9.86□□□□□ -0.83
CAPRIN1-208ENST00000530008 CRELD1Q96HD1 420 aa9.86□□□□□ -0.83
CAPRIN1-208ENST00000530008 TINF2Q9BSI4 451 aa9.86□□□□□ -0.83
CAPRIN1-208ENST00000530008 TGFBR3LH3BV60 316 aa9.85□□□□□ -0.83
CAPRIN1-208ENST00000530008 CTSHP09668 335 aa9.85□□□□□ -0.83
CAPRIN1-208ENST00000530008 FAM177A1Q8N128 213 aaPredicted RBP9.85□□□□□ -0.83
CAPRIN1-208ENST00000530008 C7orf43Q8WVR3 580 aa9.85□□□□□ -0.83
CAPRIN1-208ENST00000530008 SPG7Q9UQ90 795 aa9.85□□□□□ -0.83
CAPRIN1-208ENST00000530008 OPLAHO14841 1288 aa9.84□□□□□ -0.83
CAPRIN1-208ENST00000530008 CPNE3O75131 537 aaKnown RBP9.84□□□□□ -0.83
CAPRIN1-208ENST00000530008 NBPF1Q3BBV0 1214 aa9.84□□□□□ -0.83
CAPRIN1-208ENST00000530008 J3QL48 77 aa9.83□□□□□ -0.84
CAPRIN1-208ENST00000530008 EIF4BP23588 611 aaKnown RBP9.83□□□□□ -0.84
CAPRIN1-208ENST00000530008 RNF144AP50876 292 aaPredicted RBP9.83□□□□□ -0.84
CAPRIN1-208ENST00000530008 MEIOBQ8N635 442 aa9.83□□□□□ -0.84
CAPRIN1-208ENST00000530008 SLC43A3Q8NBI5 491 aa9.83□□□□□ -0.84
CAPRIN1-208ENST00000530008 AIDAQ96BJ3 306 aa9.83□□□□□ -0.84
CAPRIN1-208ENST00000530008 SUSD3Q96L08 255 aa9.83□□□□□ -0.84
CAPRIN1-208ENST00000530008 CAPN10Q9HC96 672 aa9.83□□□□□ -0.84
CAPRIN1-208ENST00000530008 ZDHHC3Q9NYG2 299 aa9.83□□□□□ -0.84
CAPRIN1-208ENST00000530008 IER5Q5VY09 327 aa9.82□□□□□ -0.84
CAPRIN1-208ENST00000530008 TANGO6Q9C0B7 1094 aa9.82□□□□□ -0.84
CAPRIN1-208ENST00000530008 ACBD3Q9H3P7 528 aa9.82□□□□□ -0.84
CAPRIN1-208ENST00000530008 DMGDHQ9UI17 866 aaKnown RBP9.82□□□□□ -0.84
CAPRIN1-208ENST00000530008 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.82□□□□□ -0.84
CAPRIN1-208ENST00000530008 GPC6Q9Y625 555 aaPredicted RBP9.82□□□□□ -0.84
CAPRIN1-208ENST00000530008 TTC24A2A3L6 582 aaPredicted RBP9.81□□□□□ -0.84
CAPRIN1-208ENST00000530008 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.81□□□□□ -0.84
CAPRIN1-208ENST00000530008 ZNF280CQ8ND82 737 aa9.81□□□□□ -0.84
CAPRIN1-208ENST00000530008 KLRG1Q96E93 195 aa9.81□□□□□ -0.84
CAPRIN1-208ENST00000530008 INSM2Q96T92 566 aaPredicted RBP9.81□□□□□ -0.84
CAPRIN1-208ENST00000530008 TATP17735 454 aaPredicted RBP9.8□□□□□ -0.84
CAPRIN1-208ENST00000530008 IDH3AP50213 366 aa9.8□□□□□ -0.84
CAPRIN1-208ENST00000530008 USPL1Q5W0Q7 1092 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms