RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 CEMIPQ8WUJ3 1361 aa21.61■■□□□ 1.05
COL16A1-216ENST00000529928 NPC1L1Q9UHC9 1359 aa21.61■■□□□ 1.05
COL16A1-216ENST00000529928 SRGNP10124 158 aa21.61■■□□□ 1.05
COL16A1-216ENST00000529928 MASTLQ96GX5 879 aa21.61■■□□□ 1.05
COL16A1-216ENST00000529928 DZIP3Q86Y13 1208 aaKnown RBP21.6■■□□□ 1.05
COL16A1-216ENST00000529928 BCORQ6W2J9 1755 aa21.59■■□□□ 1.05
COL16A1-216ENST00000529928 BTBD11A6QL63 1104 aa21.59■■□□□ 1.05
COL16A1-216ENST00000529928 DDNO94850 711 aaPredicted RBP21.59■■□□□ 1.05
COL16A1-216ENST00000529928 SLX4Q8IY92 1834 aa21.59■■□□□ 1.05
COL16A1-216ENST00000529928 ARFGEF2Q9Y6D5 1785 aa21.59■■□□□ 1.05
COL16A1-216ENST00000529928 IQCA1LA6NCM1 817 aa21.58■■□□□ 1.05
COL16A1-216ENST00000529928 CLEC4GQ6UXB4 293 aa21.57■■□□□ 1.04
COL16A1-216ENST00000529928 CACNA1SQ13698 1873 aa21.57■■□□□ 1.04
COL16A1-216ENST00000529928 POTEIP0CG38 1075 aa21.56■■□□□ 1.04
COL16A1-216ENST00000529928 POTEJP0CG39 1038 aa21.56■■□□□ 1.04
COL16A1-216ENST00000529928 NBPF5PQ86XG9 351 aaPredicted RBP21.56■■□□□ 1.04
COL16A1-216ENST00000529928 MKRN1Q9UHC7 482 aaKnown RBP21.56■■□□□ 1.04
COL16A1-216ENST00000529928 ZNF652Q9Y2D9 606 aa21.56■■□□□ 1.04
COL16A1-216ENST00000529928 KCNQ3O43525 872 aa21.55■■□□□ 1.04
COL16A1-216ENST00000529928 CCDC93Q567U6 631 aa21.55■■□□□ 1.04
COL16A1-216ENST00000529928 L3MBTL3Q96JM7 780 aaPredicted RBP21.55■■□□□ 1.04
COL16A1-216ENST00000529928 PRKAR2BP31323 418 aa21.54■■□□□ 1.04
COL16A1-216ENST00000529928 LDHDQ86WU2 507 aa21.54■■□□□ 1.04
COL16A1-216ENST00000529928 PHACTR3Q96KR7 559 aa21.54■■□□□ 1.04
COL16A1-216ENST00000529928 USP16Q9Y5T5 823 aa21.54■■□□□ 1.04
COL16A1-216ENST00000529928 NPR1P16066 1061 aa21.53■■□□□ 1.04
COL16A1-216ENST00000529928 CNGB1Q14028 1251 aaPredicted RBP21.53■■□□□ 1.04
COL16A1-216ENST00000529928 C7orf43Q8WVR3 580 aa21.53■■□□□ 1.04
COL16A1-216ENST00000529928 SCN4AP35499 1836 aa21.52■■□□□ 1.04
COL16A1-216ENST00000529928 CNTNAP1P78357 1384 aa21.52■■□□□ 1.04
COL16A1-216ENST00000529928 SNRPA1P09661 255 aaKnown RBP21.52■■□□□ 1.04
COL16A1-216ENST00000529928 PIP4K2AP48426 406 aaPredicted RBP21.52■■□□□ 1.04
COL16A1-216ENST00000529928 CFAP53Q96M91 514 aa21.52■■□□□ 1.04
COL16A1-216ENST00000529928 RSPH6AQ9H0K4 717 aa21.52■■□□□ 1.04
COL16A1-216ENST00000529928 TAF1DQ9H5J8 278 aaPredicted RBP21.52■■□□□ 1.04
COL16A1-216ENST00000529928 PASKQ96RG2 1323 aa21.52■■□□□ 1.03
COL16A1-216ENST00000529928 KLRG2A4D1S0 409 aaPredicted RBP21.51■■□□□ 1.03
COL16A1-216ENST00000529928 RGL2O15211 777 aa21.51■■□□□ 1.03
COL16A1-216ENST00000529928 FKBP4Q02790 459 aaKnown RBP eCLIP21.51■■□□□ 1.03
COL16A1-216ENST00000529928 TPTE2Q6XPS3 522 aa21.51■■□□□ 1.03
COL16A1-216ENST00000529928 RTF1Q92541 710 aaKnown RBP21.5■■□□□ 1.03
COL16A1-216ENST00000529928 PRAMEF22A3QJZ6 481 aa21.49■■□□□ 1.03
COL16A1-216ENST00000529928 RTKN2Q8IZC4 609 aa21.49■■□□□ 1.03
COL16A1-216ENST00000529928 NIP7Q9Y221 180 aaKnown RBP eCLIP21.49■■□□□ 1.03
COL16A1-216ENST00000529928 NUDCQ9Y266 331 aa21.49■■□□□ 1.03
COL16A1-216ENST00000529928 HACL1Q9UJ83 578 aa21.48■■□□□ 1.03
COL16A1-216ENST00000529928 TMEM88BA6NKF7 163 aa21.47■■□□□ 1.03
COL16A1-216ENST00000529928 EAPPQ56P03 285 aaPredicted RBP21.47■■□□□ 1.03
COL16A1-216ENST00000529928 ZNF277Q9NRM2 450 aaPredicted RBP21.47■■□□□ 1.03
COL16A1-216ENST00000529928 ZNF541Q9H0D2 1346 aa21.47■■□□□ 1.03
COL16A1-216ENST00000529928 FOXN1O15353 648 aa21.46■■□□□ 1.03
COL16A1-216ENST00000529928 ITGBL1O95965 494 aaPredicted RBP21.46■■□□□ 1.03
COL16A1-216ENST00000529928 ALDH1B1P30837 517 aa21.46■■□□□ 1.03
COL16A1-216ENST00000529928 MCM10Q7L590 875 aa21.46■■□□□ 1.03
COL16A1-216ENST00000529928 NBPF26B4DH59 902 aa21.45■■□□□ 1.02
COL16A1-216ENST00000529928 NBPF10Q6P3W6 841 aaKnown RBP21.45■■□□□ 1.02
COL16A1-216ENST00000529928 PNMA8AQ86V59 439 aaPredicted RBP21.45■■□□□ 1.02
COL16A1-216ENST00000529928 NBPF15Q8N660 670 aa21.45■■□□□ 1.02
COL16A1-216ENST00000529928 PRDM10Q9NQV6 1147 aa21.45■■□□□ 1.02
COL16A1-216ENST00000529928 EPHX2P34913 555 aa21.44■■□□□ 1.02
COL16A1-216ENST00000529928 IARSP41252 1262 aaKnown RBP21.44■■□□□ 1.02
COL16A1-216ENST00000529928 AIDAQ96BJ3 306 aa21.44■■□□□ 1.02
COL16A1-216ENST00000529928 CLEC11AQ9Y240 323 aa21.44■■□□□ 1.02
COL16A1-216ENST00000529928 FAM177BA6PVY3 158 aa21.43■■□□□ 1.02
COL16A1-216ENST00000529928 HTATSF1O43719 755 aaKnown RBP21.43■■□□□ 1.02
COL16A1-216ENST00000529928 U2AF1L5P0DN76 240 aaPredicted RBP21.43■■□□□ 1.02
COL16A1-216ENST00000529928 GTF2E1P29083 439 aaPredicted RBP21.43■■□□□ 1.02
COL16A1-216ENST00000529928 VEGFBP49765 207 aa21.43■■□□□ 1.02
COL16A1-216ENST00000529928 U2AF1Q01081 240 aaKnown RBP eCLIP21.43■■□□□ 1.02
COL16A1-216ENST00000529928 OLFM4Q6UX06 510 aa21.43■■□□□ 1.02
COL16A1-216ENST00000529928 ADAMTSL1Q8N6G6 1762 aa21.43■■□□□ 1.02
COL16A1-216ENST00000529928 FZD9O00144 591 aa21.42■■□□□ 1.02
COL16A1-216ENST00000529928 CTCFP49711 727 aaPredicted RBP21.42■■□□□ 1.02
COL16A1-216ENST00000529928 RNF123Q5XPI4 1314 aa21.41■■□□□ 1.02
COL16A1-216ENST00000529928 GPC2Q8N158 579 aa21.41■■□□□ 1.02
COL16A1-216ENST00000529928 SYNE4Q8N205 404 aa21.41■■□□□ 1.02
COL16A1-216ENST00000529928 PSMD1Q99460 953 aa21.41■■□□□ 1.02
COL16A1-216ENST00000529928 DCTN1Q14203 1278 aa21.4■■□□□ 1.02
COL16A1-216ENST00000529928 TAF7Q15545 349 aaPredicted RBP21.4■■□□□ 1.02
COL16A1-216ENST00000529928 HLFQ16534 295 aa21.4■■□□□ 1.02
COL16A1-216ENST00000529928 JDP2Q8WYK2 163 aa21.4■■□□□ 1.02
COL16A1-216ENST00000529928 NYXQ9GZU5 481 aa21.4■■□□□ 1.02
COL16A1-216ENST00000529928 CRY2Q49AN0 593 aa21.39■■□□□ 1.01
COL16A1-216ENST00000529928 CNTROBQ8N137 903 aa21.39■■□□□ 1.01
COL16A1-216ENST00000529928 SNED1Q8TER0 1413 aa21.38■■□□□ 1.01
COL16A1-216ENST00000529928 LAMB4A4D0S4 1761 aa21.38■■□□□ 1.01
COL16A1-216ENST00000529928 RASSF10A6NK89 507 aa21.38■■□□□ 1.01
COL16A1-216ENST00000529928 MAP1SQ66K74 1059 aaPredicted RBP21.38■■□□□ 1.01
COL16A1-216ENST00000529928 CC2D2BQ6DHV5 1058 aa21.38■■□□□ 1.01
COL16A1-216ENST00000529928 WBP1LQ9NX94 342 aa21.38■■□□□ 1.01
COL16A1-216ENST00000529928 DEFB115Q30KQ5 88 aa21.37■■□□□ 1.01
COL16A1-216ENST00000529928 ERVV-1B6SEH8 477 aa21.36■■□□□ 1.01
COL16A1-216ENST00000529928 PPP2R1AP30153 589 aa21.36■■□□□ 1.01
COL16A1-216ENST00000529928 EIF6P56537 245 aaKnown RBP21.36■■□□□ 1.01
COL16A1-216ENST00000529928 GRIPAP1Q4V328 841 aa21.36■■□□□ 1.01
COL16A1-216ENST00000529928 ABCC12Q96J65 1359 aa21.36■■□□□ 1.01
COL16A1-216ENST00000529928 NUTM1Q86Y26 1132 aa21.35■■□□□ 1.01
COL16A1-216ENST00000529928 RPGRQ92834 1020 aaKnown RBP21.35■■□□□ 1.01
COL16A1-216ENST00000529928 LMOD1P29536 600 aaPredicted RBP21.34■■□□□ 1.01
COL16A1-216ENST00000529928 LBX1P52954 281 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms