RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 ATAD2Q6PL18 1390 aa6.94□□□□□ -1.3
CTR9-205ENST00000529898 DCDC2BA2VCK2 349 aa6.93□□□□□ -1.3
CTR9-205ENST00000529898 KHNYNO15037 678 aaKnown RBP6.93□□□□□ -1.3
CTR9-205ENST00000529898 CFAP70Q5T0N1 1121 aa6.93□□□□□ -1.3
CTR9-205ENST00000529898 LARP1Q6PKG0 1096 aaKnown RBP6.93□□□□□ -1.3
CTR9-205ENST00000529898 KCTD17Q8N5Z5 321 aa6.93□□□□□ -1.3
CTR9-205ENST00000529898 MDFIQ99750 246 aa6.93□□□□□ -1.3
CTR9-205ENST00000529898 C2orf49Q9BVC5 232 aaPredicted RBP6.93□□□□□ -1.3
CTR9-205ENST00000529898 VRTNQ9H8Y1 702 aa6.93□□□□□ -1.3
CTR9-205ENST00000529898 STRN4Q9NRL3 753 aa6.93□□□□□ -1.3
CTR9-205ENST00000529898 MARK1Q9P0L2 795 aa6.93□□□□□ -1.3
CTR9-205ENST00000529898 ZNF232Q9UNY5 417 aa6.93□□□□□ -1.3
CTR9-205ENST00000529898 RBM19Q9Y4C8 960 aaKnown RBP6.93□□□□□ -1.3
CTR9-205ENST00000529898 CD33P20138 364 aa6.92□□□□□ -1.3
CTR9-205ENST00000529898 ADH6P28332 368 aa6.92□□□□□ -1.3
CTR9-205ENST00000529898 KCNQ4P56696 695 aa6.92□□□□□ -1.3
CTR9-205ENST00000529898 SNRPNP63162 240 aaKnown RBP6.92□□□□□ -1.3
CTR9-205ENST00000529898 ZNF468Q5VIY5 522 aaPredicted RBP6.92□□□□□ -1.3
CTR9-205ENST00000529898 LINC00114Q6XXX2 140 aa6.92□□□□□ -1.3
CTR9-205ENST00000529898 PODNQ7Z5L7 613 aa6.92□□□□□ -1.3
CTR9-205ENST00000529898 ANKMY2Q8IV38 441 aa6.92□□□□□ -1.3
CTR9-205ENST00000529898 BTBD6Q96KE9 485 aa6.92□□□□□ -1.3
CTR9-205ENST00000529898 ARXQ96QS3 562 aa6.92□□□□□ -1.3
CTR9-205ENST00000529898 GJA3Q9Y6H8 435 aa6.92□□□□□ -1.3
CTR9-205ENST00000529898 LMOD1P29536 600 aaPredicted RBP6.91□□□□□ -1.3
CTR9-205ENST00000529898 LRRC69Q6ZNQ3 347 aa6.91□□□□□ -1.3
CTR9-205ENST00000529898 PHACTR1Q9C0D0 580 aa6.91□□□□□ -1.3
CTR9-205ENST00000529898 ANKIB1Q9P2G1 1089 aa6.91□□□□□ -1.3
CTR9-205ENST00000529898 CHMP3Q9Y3E7 222 aa6.91□□□□□ -1.3
CTR9-205ENST00000529898 NEURL1BA8MQ27 555 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 USP17L15C9J2P7 530 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 USP17L10C9JJH3 530 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 USP17L13C9JLJ4 530 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 USP17L12C9JPN9 530 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 USP17L11C9JVI0 530 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 USP17L21D6R901 530 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 USP17L18D6R9N7 530 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 USP17L22D6RA61 530 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 USP17L17D6RBQ6 530 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 USP17L19D6RCP7 530 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 USP17L20D6RJB6 530 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 PPP1R12BO60237 982 aaPredicted RBP6.9□□□□□ -1.3
CTR9-205ENST00000529898 IGHA1P01876 353 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 IGFBP4P22692 258 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 USP17L24Q0WX57 530 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 DPYDQ12882 1025 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 ALYREFQ86V81 257 aaKnown RBP6.9□□□□□ -1.3
CTR9-205ENST00000529898 FCHSD1Q86WN1 690 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 RHPN1Q8TCX5 695 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 DCAF5Q96JK2 942 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 ZNF777Q9ULD5 760 aaPredicted RBP6.9□□□□□ -1.3
CTR9-205ENST00000529898 MKL2Q9ULH7 1088 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 HCN4Q9Y3Q4 1203 aa6.9□□□□□ -1.3
CTR9-205ENST00000529898 ALDH16A1Q8IZ83 802 aa6.89□□□□□ -1.31
CTR9-205ENST00000529898 SCG3Q8WXD2 468 aaKnown RBP6.89□□□□□ -1.31
CTR9-205ENST00000529898 SIN3BO75182 1162 aa6.88□□□□□ -1.31
CTR9-205ENST00000529898 ITGB2P05107 769 aa6.88□□□□□ -1.31
CTR9-205ENST00000529898 DGKGP49619 791 aa6.88□□□□□ -1.31
CTR9-205ENST00000529898 SRPK2P78362 688 aaKnown RBP6.88□□□□□ -1.31
CTR9-205ENST00000529898 SFSWAPQ12872 951 aaKnown RBP6.88□□□□□ -1.31
CTR9-205ENST00000529898 SUSD3Q96L08 255 aa6.88□□□□□ -1.31
CTR9-205ENST00000529898 NEUROD4Q9HD90 331 aa6.88□□□□□ -1.31
CTR9-205ENST00000529898 ADARB2-AS1A8MUL3 147 aa6.87□□□□□ -1.31
CTR9-205ENST00000529898 WEE1P30291 646 aa6.87□□□□□ -1.31
CTR9-205ENST00000529898 TYRO3Q06418 890 aa6.87□□□□□ -1.31
CTR9-205ENST00000529898 HIF1AQ16665 826 aa6.87□□□□□ -1.31
CTR9-205ENST00000529898 IER5Q5VY09 327 aa6.87□□□□□ -1.31
CTR9-205ENST00000529898 ZNF280CQ8ND82 737 aa6.87□□□□□ -1.31
CTR9-205ENST00000529898 PRR12Q9ULL5 1215 aa6.87□□□□□ -1.31
CTR9-205ENST00000529898 PCBP4P57723 403 aaKnown RBP6.86□□□□□ -1.31
CTR9-205ENST00000529898 GRIN2CQ14957 1233 aa6.86□□□□□ -1.31
CTR9-205ENST00000529898 RTN1Q16799 776 aa6.86□□□□□ -1.31
CTR9-205ENST00000529898 CHSY3Q70JA7 882 aa6.86□□□□□ -1.31
CTR9-205ENST00000529898 TNFRSF25Q93038 417 aa6.86□□□□□ -1.31
CTR9-205ENST00000529898 HSH2DQ96JZ2 352 aa6.86□□□□□ -1.31
CTR9-205ENST00000529898 HINFPQ9BQA5 517 aa6.86□□□□□ -1.31
CTR9-205ENST00000529898 ELOA3CA0A087WX78 387 aaPredicted RBP6.85□□□□□ -1.31
CTR9-205ENST00000529898 ELOA3DA6NLF2 546 aaPredicted RBP6.85□□□□□ -1.31
CTR9-205ENST00000529898 PIK3R2O00459 728 aa6.85□□□□□ -1.31
CTR9-205ENST00000529898 COL8A1P27658 744 aa6.85□□□□□ -1.31
CTR9-205ENST00000529898 ELOAQ14241 798 aaKnown RBP6.85□□□□□ -1.31
CTR9-205ENST00000529898 PLA2G4EQ3MJ16 856 aa6.85□□□□□ -1.31
CTR9-205ENST00000529898 ELOA3BQ3SY89 546 aa6.85□□□□□ -1.31
CTR9-205ENST00000529898 SYT9Q86SS6 491 aa6.85□□□□□ -1.31
CTR9-205ENST00000529898 ELOA3Q8NG57 546 aa6.85□□□□□ -1.31
CTR9-205ENST00000529898 SLC30A3Q99726 388 aa6.85□□□□□ -1.31
CTR9-205ENST00000529898 ZMYND15Q9H091 742 aa6.85□□□□□ -1.31
CTR9-205ENST00000529898 EFCC1Q9HA90 598 aa6.85□□□□□ -1.31
CTR9-205ENST00000529898 BRD7Q9NPI1 651 aa6.85□□□□□ -1.31
CTR9-205ENST00000529898 DMGDHQ9UI17 866 aaKnown RBP6.85□□□□□ -1.31
CTR9-205ENST00000529898 GNB5O14775 395 aa6.84□□□□□ -1.31
CTR9-205ENST00000529898 FOXO3O43524 673 aa6.84□□□□□ -1.31
CTR9-205ENST00000529898 SPEM2Q0P670 501 aa6.84□□□□□ -1.31
CTR9-205ENST00000529898 BTLAQ7Z6A9 289 aa6.84□□□□□ -1.31
CTR9-205ENST00000529898 CEP63Q96MT8 703 aa6.84□□□□□ -1.31
CTR9-205ENST00000529898 KCNH4Q9UQ05 1017 aa6.84□□□□□ -1.31
CTR9-205ENST00000529898 AMPD1P23109 780 aa6.83□□□□□ -1.32
CTR9-205ENST00000529898 FAM200AQ8TCP9 573 aa6.83□□□□□ -1.32
CTR9-205ENST00000529898 MYO19Q96H55 970 aa6.83□□□□□ -1.32
CTR9-205ENST00000529898 RRAGCQ9HB90 399 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms