RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 SMC5Q8IY18 1101 aa20.82■□□□□ 0.92
PACS1-209ENST00000529757 SBF2Q86WG5 1849 aa20.81■□□□□ 0.92
PACS1-209ENST00000529757 IGKV5-2P06315 115 aa20.81■□□□□ 0.92
PACS1-209ENST00000529757 ITPK1Q13572 414 aa20.81■□□□□ 0.92
PACS1-209ENST00000529757 C9orf78Q9NZ63 289 aaPredicted RBP20.81■□□□□ 0.92
PACS1-209ENST00000529757 ZBTB1Q9Y2K1 713 aa20.81■□□□□ 0.92
PACS1-209ENST00000529757 ZNF330Q9Y3S2 320 aaPredicted RBP20.81■□□□□ 0.92
PACS1-209ENST00000529757 BRWD3Q6RI45 1802 aa20.81■□□□□ 0.92
PACS1-209ENST00000529757 NUP188Q5SRE5 1749 aa20.81■□□□□ 0.92
PACS1-209ENST00000529757 FAM196AQ6ZSG2 479 aa20.8■□□□□ 0.92
PACS1-209ENST00000529757 CCDC87Q9NVE4 849 aa20.8■□□□□ 0.92
PACS1-209ENST00000529757 LRRFIP2Q9Y608 721 aaKnown RBP20.8■□□□□ 0.92
PACS1-209ENST00000529757 NEURL1BA8MQ27 555 aa20.8■□□□□ 0.92
PACS1-209ENST00000529757 NBPF7P0C2Y1 421 aaPredicted RBP20.8■□□□□ 0.92
PACS1-209ENST00000529757 IL6STP40189 918 aaPredicted RBP20.8■□□□□ 0.92
PACS1-209ENST00000529757 KIF6Q6ZMV9 814 aa20.8■□□□□ 0.92
PACS1-209ENST00000529757 GCC1Q96CN9 775 aa20.8■□□□□ 0.92
PACS1-209ENST00000529757 HMMRO75330 724 aa20.79■□□□□ 0.92
PACS1-209ENST00000529757 BCL11BQ9C0K0 894 aaPredicted RBP20.79■□□□□ 0.92
PACS1-209ENST00000529757 ZBTB3Q9H5J0 574 aa20.79■□□□□ 0.92
PACS1-209ENST00000529757 HDAC5Q9UQL6 1122 aa20.79■□□□□ 0.92
PACS1-209ENST00000529757 RREB1Q92766 1687 aa20.78■□□□□ 0.92
PACS1-209ENST00000529757 GRM8O00222 908 aa20.78■□□□□ 0.92
PACS1-209ENST00000529757 RXRBP28702 533 aa20.78■□□□□ 0.92
PACS1-209ENST00000529757 CRKLP46109 303 aaKnown RBP20.78■□□□□ 0.92
PACS1-209ENST00000529757 INTS5Q6P9B9 1019 aaKnown RBP20.78■□□□□ 0.92
PACS1-209ENST00000529757 SKAP1Q86WV1 359 aa20.78■□□□□ 0.92
PACS1-209ENST00000529757 PDZRN3Q9UPQ7 1066 aa20.78■□□□□ 0.92
PACS1-209ENST00000529757 GCKRQ14397 625 aa20.77■□□□□ 0.92
PACS1-209ENST00000529757 NPM2Q86SE8 214 aaKnown RBP20.77■□□□□ 0.92
PACS1-209ENST00000529757 UTYO14607 1347 aa20.77■□□□□ 0.92
PACS1-209ENST00000529757 COL5A3P25940 1745 aaPredicted RBP20.77■□□□□ 0.91
PACS1-209ENST00000529757 ATP8B2P98198 1209 aa20.76■□□□□ 0.91
PACS1-209ENST00000529757 MAP3K15Q6ZN16 1313 aa20.75■□□□□ 0.91
PACS1-209ENST00000529757 ATP5J2-PTCD1G3V325 749 aa20.75■□□□□ 0.91
PACS1-209ENST00000529757 DCTPP1Q9H773 170 aa20.75■□□□□ 0.91
PACS1-209ENST00000529757 AFDNP55196 1824 aaKnown RBP20.75■□□□□ 0.91
PACS1-209ENST00000529757 EIF5P55010 431 aaKnown RBP20.74■□□□□ 0.91
PACS1-209ENST00000529757 LINC00116Q8NCU8 138 aa20.74■□□□□ 0.91
PACS1-209ENST00000529757 ARXQ96QS3 562 aa20.74■□□□□ 0.91
PACS1-209ENST00000529757 RGS3P49796 1198 aa20.73■□□□□ 0.91
PACS1-209ENST00000529757 RGS17Q9UGC6 210 aaPredicted RBP20.73■□□□□ 0.91
PACS1-209ENST00000529757 NUCB1Q02818 461 aa20.73■□□□□ 0.91
PACS1-209ENST00000529757 TCIRG1Q13488 830 aa20.73■□□□□ 0.91
PACS1-209ENST00000529757 CCNL1Q9UK58 526 aaPredicted RBP20.73■□□□□ 0.91
PACS1-209ENST00000529757 LY75O60449 1722 aa20.73■□□□□ 0.91
PACS1-209ENST00000529757 CNTNAP4Q9C0A0 1308 aa20.72■□□□□ 0.91
PACS1-209ENST00000529757 DZIP3Q86Y13 1208 aaKnown RBP20.72■□□□□ 0.91
PACS1-209ENST00000529757 CCDC191Q8NCU4 936 aa20.72■□□□□ 0.91
PACS1-209ENST00000529757 CWC25Q9NXE8 425 aaPredicted RBP20.72■□□□□ 0.91
PACS1-209ENST00000529757 PNMA6EA0A0J9YXQ4 647 aa20.71■□□□□ 0.91
PACS1-209ENST00000529757 ERVV-1B6SEH8 477 aa20.71■□□□□ 0.91
PACS1-209ENST00000529757 GIGYF2Q6Y7W6 1299 aaKnown RBP20.71■□□□□ 0.91
PACS1-209ENST00000529757 ISCA1Q9BUE6 129 aa20.71■□□□□ 0.91
PACS1-209ENST00000529757 MYH14Q7Z406 1995 aaKnown RBP20.71■□□□□ 0.91
PACS1-209ENST00000529757 A0A087WZG4 1122 aa20.7■□□□□ 0.91
PACS1-209ENST00000529757 KCNQ4P56696 695 aa20.7■□□□□ 0.91
PACS1-209ENST00000529757 HSP90AB3PQ58FF7 597 aa20.7■□□□□ 0.91
PACS1-209ENST00000529757 PPP1R42Q7Z4L9 355 aa20.7■□□□□ 0.91
PACS1-209ENST00000529757 SUCLG2Q96I99 432 aa20.7■□□□□ 0.91
PACS1-209ENST00000529757 TRIM28Q13263 835 aaKnown RBP20.7■□□□□ 0.9
PACS1-209ENST00000529757 MTX1Q13505 466 aa20.7■□□□□ 0.9
PACS1-209ENST00000529757 RC3H1Q5TC82 1133 aaKnown RBP20.7■□□□□ 0.9
PACS1-209ENST00000529757 ANKRD45Q5TZF3 282 aa20.7■□□□□ 0.9
PACS1-209ENST00000529757 CHD1LQ86WJ1 897 aa20.7■□□□□ 0.9
PACS1-209ENST00000529757 SSH3Q8TE77 659 aa20.7■□□□□ 0.9
PACS1-209ENST00000529757 TBC1D2BQ9UPU7 963 aa20.7■□□□□ 0.9
PACS1-209ENST00000529757 TRIM37O94972 964 aa20.69■□□□□ 0.9
PACS1-209ENST00000529757 POTEAQ6S8J7 498 aa20.69■□□□□ 0.9
PACS1-209ENST00000529757 UBE3BQ7Z3V4 1068 aa20.69■□□□□ 0.9
PACS1-209ENST00000529757 SRGAP3O43295 1099 aa20.68■□□□□ 0.9
PACS1-209ENST00000529757 POLA2Q14181 598 aa20.68■□□□□ 0.9
PACS1-209ENST00000529757 HLFQ16534 295 aa20.68■□□□□ 0.9
PACS1-209ENST00000529757 COL15A1P39059 1388 aa20.68■□□□□ 0.9
PACS1-209ENST00000529757 H7C1W4 665 aa20.67■□□□□ 0.9
PACS1-209ENST00000529757 KAZALD1Q96I82 304 aa20.67■□□□□ 0.9
PACS1-209ENST00000529757 LNPKQ9C0E8 428 aa20.67■□□□□ 0.9
PACS1-209ENST00000529757 CASP7P55210 303 aa20.67■□□□□ 0.9
PACS1-209ENST00000529757 BICC1Q9H694 974 aaKnown RBP20.67■□□□□ 0.9
PACS1-209ENST00000529757 ZBTB47Q9UFB7 747 aaPredicted RBP20.67■□□□□ 0.9
PACS1-209ENST00000529757 PDE4AP27815 886 aa20.66■□□□□ 0.9
PACS1-209ENST00000529757 ANKRD36CQ5JPF3 1778 aa20.66■□□□□ 0.9
PACS1-209ENST00000529757 EP400Q96L91 3159 aa20.65■□□□□ 0.9
PACS1-209ENST00000529757 JARID2Q92833 1246 aaPredicted RBP20.65■□□□□ 0.9
PACS1-209ENST00000529757 TAF1LQ8IZX4 1826 aa20.64■□□□□ 0.9
PACS1-209ENST00000529757 CAMTA2O94983 1202 aa20.64■□□□□ 0.9
PACS1-209ENST00000529757 EXOC6BQ9Y2D4 811 aa20.64■□□□□ 0.9
PACS1-209ENST00000529757 NUP98P52948 1817 aa20.64■□□□□ 0.89
PACS1-209ENST00000529757 RPS6KA4O75676 772 aa20.64■□□□□ 0.89
PACS1-209ENST00000529757 GPTP24298 496 aa20.63■□□□□ 0.89
PACS1-209ENST00000529757 EPHA10Q5JZY3 1008 aa20.63■□□□□ 0.89
PACS1-209ENST00000529757 SLC27A3Q5K4L6 730 aa20.63■□□□□ 0.89
PACS1-209ENST00000529757 NLRP10Q86W26 655 aa20.63■□□□□ 0.89
PACS1-209ENST00000529757 APBB1O00213 710 aa20.62■□□□□ 0.89
PACS1-209ENST00000529757 GNPATO15228 680 aa20.62■□□□□ 0.89
PACS1-209ENST00000529757 C4BP0C0L5 1744 aa20.62■□□□□ 0.89
PACS1-209ENST00000529757 SURF6O75683 361 aaKnown RBP20.61■□□□□ 0.89
PACS1-209ENST00000529757 PCCAP05165 728 aaPredicted RBP20.61■□□□□ 0.89
PACS1-209ENST00000529757 RABL6Q3YEC7 729 aaPredicted RBP20.61■□□□□ 0.89
PACS1-209ENST00000529757 ZNF34Q8IZ26 560 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms