RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 CNBD1Q8NA66 436 aa15.91■□□□□ 0.14
AMBRA1-207ENST00000529553 IL13P35225 146 aa15.9■□□□□ 0.14
AMBRA1-207ENST00000529553 IL6STP40189 918 aaPredicted RBP15.9■□□□□ 0.14
AMBRA1-207ENST00000529553 MAP1SQ66K74 1059 aaPredicted RBP15.9■□□□□ 0.14
AMBRA1-207ENST00000529553 RTKN2Q8IZC4 609 aa15.9■□□□□ 0.14
AMBRA1-207ENST00000529553 DDX21Q9NR30 783 aaKnown RBP eCLIP15.9■□□□□ 0.14
AMBRA1-207ENST00000529553 FZD9O00144 591 aa15.89■□□□□ 0.13
AMBRA1-207ENST00000529553 MAP2K2P36507 400 aa15.89■□□□□ 0.13
AMBRA1-207ENST00000529553 GPC2Q8N158 579 aa15.89■□□□□ 0.13
AMBRA1-207ENST00000529553 CCDC24Q8N4L8 307 aa15.89■□□□□ 0.13
AMBRA1-207ENST00000529553 GPR101Q96P66 508 aaPredicted RBP15.89■□□□□ 0.13
AMBRA1-207ENST00000529553 KLRG2A4D1S0 409 aaPredicted RBP15.88■□□□□ 0.13
AMBRA1-207ENST00000529553 NPHP1O15259 732 aa15.88■□□□□ 0.13
AMBRA1-207ENST00000529553 NPM2Q86SE8 214 aaKnown RBP15.88■□□□□ 0.13
AMBRA1-207ENST00000529553 CAPNS2Q96L46 248 aa15.88■□□□□ 0.13
AMBRA1-207ENST00000529553 TBC1D2BQ9UPU7 963 aa15.88■□□□□ 0.13
AMBRA1-207ENST00000529553 MRC1P22897 1456 aa15.88■□□□□ 0.13
AMBRA1-207ENST00000529553 ZNF541Q9H0D2 1346 aa15.88■□□□□ 0.13
AMBRA1-207ENST00000529553 CA12O43570 354 aa15.87■□□□□ 0.13
AMBRA1-207ENST00000529553 NPR1P16066 1061 aa15.87■□□□□ 0.13
AMBRA1-207ENST00000529553 TTC5Q8N0Z6 440 aa15.87■□□□□ 0.13
AMBRA1-207ENST00000529553 ZNF277Q9NRM2 450 aaPredicted RBP15.87■□□□□ 0.13
AMBRA1-207ENST00000529553 SCN11AQ9UI33 1791 aa15.86■□□□□ 0.13
AMBRA1-207ENST00000529553 CAMTA2O94983 1202 aa15.86■□□□□ 0.13
AMBRA1-207ENST00000529553 MORC1Q86VD1 984 aa15.86■□□□□ 0.13
AMBRA1-207ENST00000529553 CLEC4GQ6UXB4 293 aa15.85■□□□□ 0.13
AMBRA1-207ENST00000529553 RNF123Q5XPI4 1314 aa15.85■□□□□ 0.13
AMBRA1-207ENST00000529553 ADAMTSL1Q8N6G6 1762 aa15.85■□□□□ 0.13
AMBRA1-207ENST00000529553 ANKRD31Q8N7Z5 1873 aa15.84■□□□□ 0.13
AMBRA1-207ENST00000529553 ALDH1B1P30837 517 aa15.84■□□□□ 0.13
AMBRA1-207ENST00000529553 IARSP41252 1262 aaKnown RBP15.84■□□□□ 0.13
AMBRA1-207ENST00000529553 MCOLN1Q9GZU1 580 aa15.84■□□□□ 0.13
AMBRA1-207ENST00000529553 SLX4Q8IY92 1834 aa15.84■□□□□ 0.13
AMBRA1-207ENST00000529553 MTHFSDQ2M296 383 aaKnown RBP15.83■□□□□ 0.12
AMBRA1-207ENST00000529553 CYP4F22Q6NT55 531 aa15.83■□□□□ 0.12
AMBRA1-207ENST00000529553 ZNF790Q6PG37 636 aa15.83■□□□□ 0.12
AMBRA1-207ENST00000529553 SYNE4Q8N205 404 aa15.83■□□□□ 0.12
AMBRA1-207ENST00000529553 JDP2Q8WYK2 163 aa15.83■□□□□ 0.12
AMBRA1-207ENST00000529553 ZNF496Q96IT1 587 aaPredicted RBP15.83■□□□□ 0.12
AMBRA1-207ENST00000529553 PANK3Q9H999 370 aa15.83■□□□□ 0.12
AMBRA1-207ENST00000529553 TLL2Q9Y6L7 1015 aa15.83■□□□□ 0.12
AMBRA1-207ENST00000529553 HEG1Q9ULI3 1381 aa15.83■□□□□ 0.12
AMBRA1-207ENST00000529553 RGL2O15211 777 aa15.82■□□□□ 0.12
AMBRA1-207ENST00000529553 CST9Q5W186 159 aa15.82■□□□□ 0.12
AMBRA1-207ENST00000529553 TPTE2Q6XPS3 522 aa15.82■□□□□ 0.12
AMBRA1-207ENST00000529553 PAXIP1Q6ZW49 1069 aaPredicted RBP15.82■□□□□ 0.12
AMBRA1-207ENST00000529553 USP50Q70EL3 339 aaPredicted RBP15.82■□□□□ 0.12
AMBRA1-207ENST00000529553 NBPF5PQ86XG9 351 aaPredicted RBP15.82■□□□□ 0.12
AMBRA1-207ENST00000529553 PSMD1Q99460 953 aa15.82■□□□□ 0.12
AMBRA1-207ENST00000529553 ZNF330Q9Y3S2 320 aaPredicted RBP15.82■□□□□ 0.12
AMBRA1-207ENST00000529553 COL11A2P13942 1736 aaPredicted RBP15.81■□□□□ 0.12
AMBRA1-207ENST00000529553 LMOD1P29536 600 aaPredicted RBP15.81■□□□□ 0.12
AMBRA1-207ENST00000529553 EIF6P56537 245 aaKnown RBP15.81■□□□□ 0.12
AMBRA1-207ENST00000529553 HHIPL1Q96JK4 782 aa15.81■□□□□ 0.12
AMBRA1-207ENST00000529553 CFAP44Q96MT7 982 aa15.81■□□□□ 0.12
AMBRA1-207ENST00000529553 A1BGP04217 495 aa15.8■□□□□ 0.12
AMBRA1-207ENST00000529553 GRIPAP1Q4V328 841 aa15.8■□□□□ 0.12
AMBRA1-207ENST00000529553 CC2D2BQ6DHV5 1058 aa15.8■□□□□ 0.12
AMBRA1-207ENST00000529553 DZIP3Q86Y13 1208 aaKnown RBP15.8■□□□□ 0.12
AMBRA1-207ENST00000529553 BRPF1P55201 1214 aaPredicted RBP15.79■□□□□ 0.12
AMBRA1-207ENST00000529553 TEFQ10587 303 aa15.79■□□□□ 0.12
AMBRA1-207ENST00000529553 FMNL2Q96PY5 1086 aa15.79■□□□□ 0.12
AMBRA1-207ENST00000529553 POLR3GLQ9BT43 218 aa15.79■□□□□ 0.12
AMBRA1-207ENST00000529553 ZNF652Q9Y2D9 606 aa15.79■□□□□ 0.12
AMBRA1-207ENST00000529553 THSD7BQ9C0I4 1608 aa15.79■□□□□ 0.12
AMBRA1-207ENST00000529553 GRM1Q13255 1194 aa15.78■□□□□ 0.12
AMBRA1-207ENST00000529553 OLFM4Q6UX06 510 aa15.78■□□□□ 0.12
AMBRA1-207ENST00000529553 AOC2O75106 756 aa15.77■□□□□ 0.12
AMBRA1-207ENST00000529553 HMOX1P09601 288 aa15.77■□□□□ 0.12
AMBRA1-207ENST00000529553 EPS15P42566 896 aa15.77■□□□□ 0.12
AMBRA1-207ENST00000529553 SCNN1DP51172 638 aa15.77■□□□□ 0.12
AMBRA1-207ENST00000529553 SAPCD2Q86UD0 394 aa15.77■□□□□ 0.12
AMBRA1-207ENST00000529553 TSKSQ9UJT2 592 aa15.77■□□□□ 0.12
AMBRA1-207ENST00000529553 TIMELESSQ9UNS1 1208 aa15.77■□□□□ 0.12
AMBRA1-207ENST00000529553 GJA3Q9Y6H8 435 aa15.77■□□□□ 0.12
AMBRA1-207ENST00000529553 ARFGEF2Q9Y6D5 1785 aa15.77■□□□□ 0.11
AMBRA1-207ENST00000529553 SCN7AQ01118 1682 aa15.76■□□□□ 0.11
AMBRA1-207ENST00000529553 FMR1Q06787 632 aaKnown RBP eCLIP15.76■□□□□ 0.11
AMBRA1-207ENST00000529553 DGKZQ13574 1117 aa15.76■□□□□ 0.11
AMBRA1-207ENST00000529553 IL17REQ8NFR9 667 aa15.76■□□□□ 0.11
AMBRA1-207ENST00000529553 UBR2Q8IWV8 1755 aa15.75■□□□□ 0.11
AMBRA1-207ENST00000529553 GNAT3A8MTJ3 354 aa15.75■□□□□ 0.11
AMBRA1-207ENST00000529553 KNSTRNQ9Y448 316 aa15.75■□□□□ 0.11
AMBRA1-207ENST00000529553 TRAF5O00463 557 aa15.74■□□□□ 0.11
AMBRA1-207ENST00000529553 ADARB2Q9NS39 739 aaKnown RBP15.74■□□□□ 0.11
AMBRA1-207ENST00000529553 CRY2Q49AN0 593 aa15.73■□□□□ 0.11
AMBRA1-207ENST00000529553 GAS2L2Q8NHY3 880 aa15.73■□□□□ 0.11
AMBRA1-207ENST00000529553 VPS33BQ9H267 617 aa15.73■□□□□ 0.11
AMBRA1-207ENST00000529553 PGAP2Q9UHJ9 254 aa15.73■□□□□ 0.11
AMBRA1-207ENST00000529553 NIP7Q9Y221 180 aaKnown RBP eCLIP15.73■□□□□ 0.11
AMBRA1-207ENST00000529553 SNED1Q8TER0 1413 aa15.73■□□□□ 0.11
AMBRA1-207ENST00000529553 DIAPH1O60610 1272 aaKnown RBP15.72■□□□□ 0.11
AMBRA1-207ENST00000529553 CELF2O95319 508 aaKnown RBP15.72■□□□□ 0.11
AMBRA1-207ENST00000529553 LARGE2Q8N3Y3 721 aa15.72■□□□□ 0.11
AMBRA1-207ENST00000529553 USP16Q9Y5T5 823 aa15.72■□□□□ 0.11
AMBRA1-207ENST00000529553 TNRC18O15417 2968 aaPredicted RBP15.71■□□□□ 0.11
AMBRA1-207ENST00000529553 GTF2E1P29083 439 aaPredicted RBP15.71■□□□□ 0.11
AMBRA1-207ENST00000529553 HOXA10P31260 410 aaPredicted RBP15.71■□□□□ 0.11
AMBRA1-207ENST00000529553 NOGQ13253 232 aa15.71■□□□□ 0.11
AMBRA1-207ENST00000529553 PRPF38BQ5VTL8 546 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 696.6 ms