RNA–Protein interactions for RNA: ENST00000529542.1

HIF3A-213, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-213ENST00000529542 SRGNP10124 158 aa19.06■□□□□ 0.64
HIF3A-213ENST00000529542 MASTLQ96GX5 879 aa19.06■□□□□ 0.64
HIF3A-213ENST00000529542 NEFMP07197 916 aa19.05■□□□□ 0.64
HIF3A-213ENST00000529542 ERFEQ4G0M1 354 aa19.05■□□□□ 0.64
HIF3A-213ENST00000529542 TAF7Q15545 349 aaPredicted RBP19.04■□□□□ 0.64
HIF3A-213ENST00000529542 TPTE2Q6XPS3 522 aa19.04■□□□□ 0.64
HIF3A-213ENST00000529542 MCM10Q7L590 875 aa19.04■□□□□ 0.64
HIF3A-213ENST00000529542 NBPF5PQ86XG9 351 aaPredicted RBP19.04■□□□□ 0.64
HIF3A-213ENST00000529542 ANKRD31Q8N7Z5 1873 aa19.04■□□□□ 0.64
HIF3A-213ENST00000529542 TAOK3Q9H2K8 898 aa19.04■□□□□ 0.64
HIF3A-213ENST00000529542 PRPF40BQ6NWY9 871 aaKnown RBP19.02■□□□□ 0.64
HIF3A-213ENST00000529542 CCDC24Q8N4L8 307 aa19.02■□□□□ 0.64
HIF3A-213ENST00000529542 PNISRQ8TF01 805 aaKnown RBP19.02■□□□□ 0.64
HIF3A-213ENST00000529542 KLRG2A4D1S0 409 aaPredicted RBP19.01■□□□□ 0.63
HIF3A-213ENST00000529542 NPR1P16066 1061 aa19.01■□□□□ 0.63
HIF3A-213ENST00000529542 ZNF219Q9P2Y4 722 aaPredicted RBP19.01■□□□□ 0.63
HIF3A-213ENST00000529542 FER1L6Q2WGJ9 1857 aa19.01■□□□□ 0.63
HIF3A-213ENST00000529542 CCDC88AQ3V6T2 1871 aa19.01■□□□□ 0.63
HIF3A-213ENST00000529542 HTRA3P83110 453 aa19■□□□□ 0.63
HIF3A-213ENST00000529542 BCORQ6W2J9 1755 aa19■□□□□ 0.63
HIF3A-213ENST00000529542 TIAM2Q8IVF5 1701 aa19■□□□□ 0.63
HIF3A-213ENST00000529542 PRAMEF22A3QJZ6 481 aa18.99■□□□□ 0.63
HIF3A-213ENST00000529542 POTECB2RU33 542 aa18.99■□□□□ 0.63
HIF3A-213ENST00000529542 PNNQ9H307 717 aaKnown RBP18.99■□□□□ 0.63
HIF3A-213ENST00000529542 NIP7Q9Y221 180 aaKnown RBP eCLIP18.99■□□□□ 0.63
HIF3A-213ENST00000529542 DICER1Q9UPY3 1922 aaKnown RBP18.99■□□□□ 0.63
HIF3A-213ENST00000529542 NBPF26B4DH59 902 aa18.98■□□□□ 0.63
HIF3A-213ENST00000529542 PIP4K2AP48426 406 aaPredicted RBP18.98■□□□□ 0.63
HIF3A-213ENST00000529542 DCTN1Q14203 1278 aa18.98■□□□□ 0.63
HIF3A-213ENST00000529542 CCDC93Q567U6 631 aa18.98■□□□□ 0.63
HIF3A-213ENST00000529542 NBPF10Q6P3W6 841 aaKnown RBP18.98■□□□□ 0.63
HIF3A-213ENST00000529542 NBPF15Q8N660 670 aa18.98■□□□□ 0.63
HIF3A-213ENST00000529542 C7orf43Q8WVR3 580 aa18.98■□□□□ 0.63
HIF3A-213ENST00000529542 COL11A2P13942 1736 aaPredicted RBP18.97■□□□□ 0.63
HIF3A-213ENST00000529542 IQCA1LA6NCM1 817 aa18.97■□□□□ 0.63
HIF3A-213ENST00000529542 ALDH1B1P30837 517 aa18.97■□□□□ 0.63
HIF3A-213ENST00000529542 SLX4Q8IY92 1834 aa18.96■□□□□ 0.63
HIF3A-213ENST00000529542 ERVV-1B6SEH8 477 aa18.96■□□□□ 0.63
HIF3A-213ENST00000529542 RTKN2Q8IZC4 609 aa18.96■□□□□ 0.63
HIF3A-213ENST00000529542 GTF2E1P29083 439 aaPredicted RBP18.95■□□□□ 0.62
HIF3A-213ENST00000529542 CHADLQ6NUI6 762 aa18.95■□□□□ 0.62
HIF3A-213ENST00000529542 NYXQ9GZU5 481 aa18.95■□□□□ 0.62
HIF3A-213ENST00000529542 ARFGEF2Q9Y6D5 1785 aa18.94■□□□□ 0.62
HIF3A-213ENST00000529542 FKBP4Q02790 459 aaKnown RBP eCLIP18.94■□□□□ 0.62
HIF3A-213ENST00000529542 L3MBTL3Q96JM7 780 aaPredicted RBP18.94■□□□□ 0.62
HIF3A-213ENST00000529542 DDNO94850 711 aaPredicted RBP18.93■□□□□ 0.62
HIF3A-213ENST00000529542 GRIPAP1Q4V328 841 aa18.92■□□□□ 0.62
HIF3A-213ENST00000529542 CC2D2BQ6DHV5 1058 aa18.92■□□□□ 0.62
HIF3A-213ENST00000529542 PLEKHF1Q96S99 279 aa18.92■□□□□ 0.62
HIF3A-213ENST00000529542 CREBZFQ9NS37 354 aa18.92■□□□□ 0.62
HIF3A-213ENST00000529542 EIF4A1P60842 406 aaKnown RBP18.91■□□□□ 0.62
HIF3A-213ENST00000529542 NFE2L2Q16236 605 aa18.91■□□□□ 0.62
HIF3A-213ENST00000529542 HLFQ16534 295 aa18.91■□□□□ 0.62
HIF3A-213ENST00000529542 MIS18AQ9NYP9 233 aa18.91■□□□□ 0.62
HIF3A-213ENST00000529542 CRY2Q49AN0 593 aa18.9■□□□□ 0.62
HIF3A-213ENST00000529542 KIF6Q6ZMV9 814 aa18.9■□□□□ 0.62
HIF3A-213ENST00000529542 LDHDQ86WU2 507 aa18.9■□□□□ 0.62
HIF3A-213ENST00000529542 ERBB4Q15303 1308 aa18.9■□□□□ 0.62
HIF3A-213ENST00000529542 MAP3K15Q6ZN16 1313 aa18.9■□□□□ 0.62
HIF3A-213ENST00000529542 MAPK8IP3Q9UPT6 1336 aa18.89■□□□□ 0.61
HIF3A-213ENST00000529542 IBTKQ9P2D0 1353 aaPredicted RBP18.89■□□□□ 0.61
HIF3A-213ENST00000529542 FAM177BA6PVY3 158 aa18.88■□□□□ 0.61
HIF3A-213ENST00000529542 COL13A1Q5TAT6 717 aaPredicted RBP18.88■□□□□ 0.61
HIF3A-213ENST00000529542 PSMD1Q99460 953 aa18.88■□□□□ 0.61
HIF3A-213ENST00000529542 TAF1DQ9H5J8 278 aaPredicted RBP18.88■□□□□ 0.61
HIF3A-213ENST00000529542 LAMB4A4D0S4 1761 aa18.88■□□□□ 0.61
HIF3A-213ENST00000529542 SCN4AP35499 1836 aa18.87■□□□□ 0.61
HIF3A-213ENST00000529542 IARSP41252 1262 aaKnown RBP18.87■□□□□ 0.61
HIF3A-213ENST00000529542 CACNA1SQ13698 1873 aa18.87■□□□□ 0.61
HIF3A-213ENST00000529542 RIC1Q4ADV7 1423 aa18.87■□□□□ 0.61
HIF3A-213ENST00000529542 NGEFQ8N5V2 710 aa18.87■□□□□ 0.61
HIF3A-213ENST00000529542 ZNF277Q9NRM2 450 aaPredicted RBP18.87■□□□□ 0.61
HIF3A-213ENST00000529542 BABAM1Q9NWV8 329 aa18.87■□□□□ 0.61
HIF3A-213ENST00000529542 HACL1Q9UJ83 578 aa18.87■□□□□ 0.61
HIF3A-213ENST00000529542 RRP7AQ9Y3A4 280 aaKnown RBP18.87■□□□□ 0.61
HIF3A-213ENST00000529542 FZD9O00144 591 aa18.86■□□□□ 0.61
HIF3A-213ENST00000529542 HOXA10P31260 410 aaPredicted RBP18.86■□□□□ 0.61
HIF3A-213ENST00000529542 PNMA8AQ86V59 439 aaPredicted RBP18.86■□□□□ 0.61
HIF3A-213ENST00000529542 SYNE4Q8N205 404 aa18.86■□□□□ 0.61
HIF3A-213ENST00000529542 JDP2Q8WYK2 163 aa18.86■□□□□ 0.61
HIF3A-213ENST00000529542 HSPA1AP0DMV8 641 aaKnown RBP18.85■□□□□ 0.61
HIF3A-213ENST00000529542 HSPA1BP0DMV9 641 aaKnown RBP18.85■□□□□ 0.61
HIF3A-213ENST00000529542 GIGYF2Q6Y7W6 1299 aaKnown RBP18.85■□□□□ 0.61
HIF3A-213ENST00000529542 RPGRQ92834 1020 aaKnown RBP18.85■□□□□ 0.61
HIF3A-213ENST00000529542 KDM3BQ7LBC6 1761 aa18.85■□□□□ 0.61
HIF3A-213ENST00000529542 PASKQ96RG2 1323 aa18.84■□□□□ 0.61
HIF3A-213ENST00000529542 POTEIP0CG38 1075 aa18.84■□□□□ 0.61
HIF3A-213ENST00000529542 POTEJP0CG39 1038 aa18.84■□□□□ 0.61
HIF3A-213ENST00000529542 MYL6BP14649 208 aa18.84■□□□□ 0.61
HIF3A-213ENST00000529542 PARP10Q53GL7 1025 aa18.84■□□□□ 0.61
HIF3A-213ENST00000529542 PPP1R42Q7Z4L9 355 aa18.84■□□□□ 0.61
HIF3A-213ENST00000529542 ZNF34Q8IZ26 560 aa18.84■□□□□ 0.61
HIF3A-213ENST00000529542 TNS4Q8IZW8 715 aa18.84■□□□□ 0.61
HIF3A-213ENST00000529542 GPC2Q8N158 579 aa18.84■□□□□ 0.61
HIF3A-213ENST00000529542 CRAMP1Q96RY5 1269 aa18.84■□□□□ 0.61
HIF3A-213ENST00000529542 DLG5Q8TDM6 1919 aa18.83■□□□□ 0.6
HIF3A-213ENST00000529542 LMOD3Q0VAK6 560 aa18.83■□□□□ 0.6
HIF3A-213ENST00000529542 TTLL7Q6ZT98 887 aa18.83■□□□□ 0.6
HIF3A-213ENST00000529542 NUTM1Q86Y26 1132 aa18.83■□□□□ 0.6
HIF3A-213ENST00000529542 RBM17Q96I25 401 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms