RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 BCORQ6W2J9 1755 aa18.02■□□□□ 0.47
USF1-209ENST00000529476 USP42Q9H9J4 1324 aaKnown RBP18.01■□□□□ 0.47
USF1-209ENST00000529476 POLD1P28340 1107 aa18.01■□□□□ 0.47
USF1-209ENST00000529476 USPL1Q5W0Q7 1092 aa18.01■□□□□ 0.47
USF1-209ENST00000529476 DZIP3Q86Y13 1208 aaKnown RBP18.01■□□□□ 0.47
USF1-209ENST00000529476 NARFQ9UHQ1 456 aa18.01■□□□□ 0.47
USF1-209ENST00000529476 SCN7AQ01118 1682 aa18.01■□□□□ 0.47
USF1-209ENST00000529476 COL24A1Q17RW2 1714 aa18.01■□□□□ 0.47
USF1-209ENST00000529476 CACNA1FO60840 1977 aa18■□□□□ 0.47
USF1-209ENST00000529476 ATP10DQ9P241 1426 aa18■□□□□ 0.47
USF1-209ENST00000529476 ZPR1O75312 459 aa18■□□□□ 0.47
USF1-209ENST00000529476 MSL1Q68DK7 614 aa18■□□□□ 0.47
USF1-209ENST00000529476 TTLL7Q6ZT98 887 aa18■□□□□ 0.47
USF1-209ENST00000529476 SLC16A10Q8TF71 515 aa18■□□□□ 0.47
USF1-209ENST00000529476 XAGE3Q8WTP9 111 aa18■□□□□ 0.47
USF1-209ENST00000529476 STK31Q9BXU1 1019 aa18■□□□□ 0.47
USF1-209ENST00000529476 HYPKQ9NX55 129 aa18■□□□□ 0.47
USF1-209ENST00000529476 GYS1P13807 737 aa17.99■□□□□ 0.47
USF1-209ENST00000529476 HSPA6P17066 643 aa17.99■□□□□ 0.47
USF1-209ENST00000529476 AIMP1Q12904 312 aaKnown RBP17.99■□□□□ 0.47
USF1-209ENST00000529476 COPS6Q7L5N1 327 aa17.99■□□□□ 0.47
USF1-209ENST00000529476 PHAXQ9H814 394 aaKnown RBP17.99■□□□□ 0.47
USF1-209ENST00000529476 CAMTA2O94983 1202 aa17.98■□□□□ 0.47
USF1-209ENST00000529476 SLC4A2P04920 1241 aa17.98■□□□□ 0.47
USF1-209ENST00000529476 BCL2L12Q9HB09 334 aa17.98■□□□□ 0.47
USF1-209ENST00000529476 GRIN3BO60391 1043 aa17.97■□□□□ 0.47
USF1-209ENST00000529476 CT47B1P0C2W7 299 aaPredicted RBP17.97■□□□□ 0.47
USF1-209ENST00000529476 FKBP8Q14318 412 aa17.97■□□□□ 0.47
USF1-209ENST00000529476 KIF6Q6ZMV9 814 aa17.97■□□□□ 0.47
USF1-209ENST00000529476 G2E3Q7L622 706 aa17.97■□□□□ 0.47
USF1-209ENST00000529476 NUP98P52948 1817 aa17.97■□□□□ 0.47
USF1-209ENST00000529476 ZBTB3Q9H5J0 574 aa17.96■□□□□ 0.47
USF1-209ENST00000529476 MAP3K15Q6ZN16 1313 aa17.96■□□□□ 0.46
USF1-209ENST00000529476 HLFQ16534 295 aa17.95■□□□□ 0.46
USF1-209ENST00000529476 SSH1Q8WYL5 1049 aa17.95■□□□□ 0.46
USF1-209ENST00000529476 ZNF428Q96B54 188 aa17.95■□□□□ 0.46
USF1-209ENST00000529476 BCL2L13Q9BXK5 485 aa17.95■□□□□ 0.46
USF1-209ENST00000529476 GPBP1L1Q9HC44 474 aaPredicted RBP17.95■□□□□ 0.46
USF1-209ENST00000529476 ERVV-1B6SEH8 477 aa17.94■□□□□ 0.46
USF1-209ENST00000529476 NLGN1Q8N2Q7 840 aa17.94■□□□□ 0.46
USF1-209ENST00000529476 ARFGEF2Q9Y6D5 1785 aa17.94■□□□□ 0.46
USF1-209ENST00000529476 RARSP54136 660 aaKnown RBP17.93■□□□□ 0.46
USF1-209ENST00000529476 FLIIQ13045 1269 aa17.93■□□□□ 0.46
USF1-209ENST00000529476 ALDH1L2Q3SY69 923 aa17.93■□□□□ 0.46
USF1-209ENST00000529476 MRPL50Q8N5N7 158 aaKnown RBP17.93■□□□□ 0.46
USF1-209ENST00000529476 TBC1D9BQ66K14 1250 aa17.92■□□□□ 0.46
USF1-209ENST00000529476 BICDL1Q6ZP65 573 aa17.92■□□□□ 0.46
USF1-209ENST00000529476 ANKRD13DQ6ZTN6 518 aa17.92■□□□□ 0.46
USF1-209ENST00000529476 PLBD2Q8NHP8 589 aa17.92■□□□□ 0.46
USF1-209ENST00000529476 ZNF526Q8TF50 670 aaPredicted RBP17.92■□□□□ 0.46
USF1-209ENST00000529476 SMC4Q9NTJ3 1288 aa17.92■□□□□ 0.46
USF1-209ENST00000529476 ZNF652Q9Y2D9 606 aa17.92■□□□□ 0.46
USF1-209ENST00000529476 ANKRD36CQ5JPF3 1778 aa17.91■□□□□ 0.46
USF1-209ENST00000529476 MMP10P09238 476 aa17.91■□□□□ 0.46
USF1-209ENST00000529476 NFIXQ14938 502 aa17.91■□□□□ 0.46
USF1-209ENST00000529476 CLEC4GQ6UXB4 293 aa17.91■□□□□ 0.46
USF1-209ENST00000529476 RGL2O15211 777 aa17.9■□□□□ 0.46
USF1-209ENST00000529476 TM4SF1P30408 202 aa17.9■□□□□ 0.46
USF1-209ENST00000529476 DDR1Q08345 913 aa17.9■□□□□ 0.46
USF1-209ENST00000529476 FKBP5Q13451 457 aaPredicted RBP17.9■□□□□ 0.46
USF1-209ENST00000529476 GIGYF2Q6Y7W6 1299 aaKnown RBP17.9■□□□□ 0.46
USF1-209ENST00000529476 RIC3Q7Z5B4 369 aa17.9■□□□□ 0.46
USF1-209ENST00000529476 ADCY9O60503 1353 aa17.9■□□□□ 0.46
USF1-209ENST00000529476 DDX58O95786 925 aaKnown RBP17.89■□□□□ 0.45
USF1-209ENST00000529476 AFDNP55196 1824 aaKnown RBP17.88■□□□□ 0.45
USF1-209ENST00000529476 PI4KAP2A4QPH2 592 aa17.88■□□□□ 0.45
USF1-209ENST00000529476 BCAR3O75815 825 aa17.88■□□□□ 0.45
USF1-209ENST00000529476 KSR2Q6VAB6 950 aa17.88■□□□□ 0.45
USF1-209ENST00000529476 PI4KAP1Q8N8J0 262 aa17.88■□□□□ 0.45
USF1-209ENST00000529476 NIP7Q9Y221 180 aaKnown RBP eCLIP17.88■□□□□ 0.45
USF1-209ENST00000529476 MAP3K2Q9Y2U5 619 aa17.88■□□□□ 0.45
USF1-209ENST00000529476 POLRMTO00411 1230 aaKnown RBP17.87■□□□□ 0.45
USF1-209ENST00000529476 GPTP24298 496 aa17.87■□□□□ 0.45
USF1-209ENST00000529476 TCIRG1Q13488 830 aa17.87■□□□□ 0.45
USF1-209ENST00000529476 ZNF34Q8IZ26 560 aa17.87■□□□□ 0.45
USF1-209ENST00000529476 SETDB2Q96T68 719 aa17.87■□□□□ 0.45
USF1-209ENST00000529476 PARP3Q9Y6F1 533 aa17.87■□□□□ 0.45
USF1-209ENST00000529476 BRPF1P55201 1214 aaPredicted RBP17.86■□□□□ 0.45
USF1-209ENST00000529476 HSP90AB3PQ58FF7 597 aa17.86■□□□□ 0.45
USF1-209ENST00000529476 UBN2Q6ZU65 1347 aa17.86■□□□□ 0.45
USF1-209ENST00000529476 CARMIL3Q8ND23 1372 aa17.86■□□□□ 0.45
USF1-209ENST00000529476 F6X3S4 739 aa17.85■□□□□ 0.45
USF1-209ENST00000529476 ATP5J2-PTCD1G3V325 749 aa17.85■□□□□ 0.45
USF1-209ENST00000529476 SERPINB2P05120 415 aa17.85■□□□□ 0.45
USF1-209ENST00000529476 MYD88Q99836 296 aa17.85■□□□□ 0.45
USF1-209ENST00000529476 METTL22Q9BUU2 404 aaPredicted RBP17.85■□□□□ 0.45
USF1-209ENST00000529476 NRXN2Q9P2S2 1712 aa17.85■□□□□ 0.45
USF1-209ENST00000529476 NOB1Q9ULX3 412 aaKnown RBP17.85■□□□□ 0.45
USF1-209ENST00000529476 PTPRCP08575 1304 aa17.84■□□□□ 0.45
USF1-209ENST00000529476 FAM177BA6PVY3 158 aa17.84■□□□□ 0.45
USF1-209ENST00000529476 DNAAF4Q8WXU2 420 aa17.84■□□□□ 0.45
USF1-209ENST00000529476 ISCA1Q9BUE6 129 aa17.84■□□□□ 0.45
USF1-209ENST00000529476 RCAN3Q9UKA8 241 aa17.84■□□□□ 0.45
USF1-209ENST00000529476 KIF3CO14782 793 aa17.83■□□□□ 0.44
USF1-209ENST00000529476 SUSD4Q5VX71 490 aa17.83■□□□□ 0.44
USF1-209ENST00000529476 KIF16BQ96L93 1317 aa17.82■□□□□ 0.44
USF1-209ENST00000529476 NLRP10Q86W26 655 aa17.82■□□□□ 0.44
USF1-209ENST00000529476 NBPF5PQ86XG9 351 aaPredicted RBP17.82■□□□□ 0.44
USF1-209ENST00000529476 DNAJC5GQ8N7S2 189 aa17.82■□□□□ 0.44
USF1-209ENST00000529476 FRAT1Q92837 279 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms