RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 ZNF541Q9H0D2 1346 aa25.77■■□□□ 1.72
SSRP1-204ENST00000529002 TMEM88BA6NKF7 163 aa25.76■■□□□ 1.71
SSRP1-204ENST00000529002 PIP4K2AP48426 406 aaPredicted RBP25.76■■□□□ 1.71
SSRP1-204ENST00000529002 AMER1Q5JTC6 1135 aaPredicted RBP25.76■■□□□ 1.71
SSRP1-204ENST00000529002 IL17REQ8NFR9 667 aa25.76■■□□□ 1.71
SSRP1-204ENST00000529002 IQCA1LA6NCM1 817 aa25.75■■□□□ 1.71
SSRP1-204ENST00000529002 IL6STP40189 918 aaPredicted RBP25.75■■□□□ 1.71
SSRP1-204ENST00000529002 ZNF790Q6PG37 636 aa25.75■■□□□ 1.71
SSRP1-204ENST00000529002 MASTLQ96GX5 879 aa25.75■■□□□ 1.71
SSRP1-204ENST00000529002 L3MBTL3Q96JM7 780 aaPredicted RBP25.75■■□□□ 1.71
SSRP1-204ENST00000529002 WBP1LQ9NX94 342 aa25.75■■□□□ 1.71
SSRP1-204ENST00000529002 ADAMTSL1Q8N6G6 1762 aa25.74■■□□□ 1.71
SSRP1-204ENST00000529002 KCNQ3O43525 872 aa25.74■■□□□ 1.71
SSRP1-204ENST00000529002 ST5P78524 1137 aa25.74■■□□□ 1.71
SSRP1-204ENST00000529002 C7orf43Q8WVR3 580 aa25.74■■□□□ 1.71
SSRP1-204ENST00000529002 ZNF277Q9NRM2 450 aaPredicted RBP25.74■■□□□ 1.71
SSRP1-204ENST00000529002 TIMELESSQ9UNS1 1208 aa25.74■■□□□ 1.71
SSRP1-204ENST00000529002 CLEC11AQ9Y240 323 aa25.74■■□□□ 1.71
SSRP1-204ENST00000529002 DIAPH1O60610 1272 aaKnown RBP25.71■■□□□ 1.71
SSRP1-204ENST00000529002 TEFQ10587 303 aa25.71■■□□□ 1.71
SSRP1-204ENST00000529002 HSPA8P11142 646 aaKnown RBP25.7■■□□□ 1.7
SSRP1-204ENST00000529002 SOGA3Q5TF21 947 aa25.7■■□□□ 1.7
SSRP1-204ENST00000529002 MAP1SQ66K74 1059 aaPredicted RBP25.7■■□□□ 1.7
SSRP1-204ENST00000529002 DZIP3Q86Y13 1208 aaKnown RBP25.7■■□□□ 1.7
SSRP1-204ENST00000529002 TEX13AQ9BXU3 409 aaPredicted RBP25.7■■□□□ 1.7
SSRP1-204ENST00000529002 RNF123Q5XPI4 1314 aa25.69■■□□□ 1.7
SSRP1-204ENST00000529002 CCDC93Q567U6 631 aa25.69■■□□□ 1.7
SSRP1-204ENST00000529002 ABHD8Q96I13 439 aa25.69■■□□□ 1.7
SSRP1-204ENST00000529002 HACL1Q9UJ83 578 aa25.69■■□□□ 1.7
SSRP1-204ENST00000529002 PRAMEF22A3QJZ6 481 aa25.68■■□□□ 1.7
SSRP1-204ENST00000529002 EPHX2P34913 555 aa25.68■■□□□ 1.7
SSRP1-204ENST00000529002 FAM161AQ3B820 660 aa25.68■■□□□ 1.7
SSRP1-204ENST00000529002 SLC34A2O95436 690 aa25.67■■□□□ 1.7
SSRP1-204ENST00000529002 FKBP4Q02790 459 aaKnown RBP eCLIP25.67■■□□□ 1.7
SSRP1-204ENST00000529002 DEFB115Q30KQ5 88 aa25.67■■□□□ 1.7
SSRP1-204ENST00000529002 NBPF5PQ86XG9 351 aaPredicted RBP25.67■■□□□ 1.7
SSRP1-204ENST00000529002 FMNL2Q96PY5 1086 aa25.67■■□□□ 1.7
SSRP1-204ENST00000529002 USP16Q9Y5T5 823 aa25.67■■□□□ 1.7
SSRP1-204ENST00000529002 GNAT3A8MTJ3 354 aa25.66■■□□□ 1.7
SSRP1-204ENST00000529002 FMR1Q06787 632 aaKnown RBP eCLIP25.66■■□□□ 1.74e-7■■■□□ 19.2
SSRP1-204ENST00000529002 NPM2Q86SE8 214 aaKnown RBP25.66■■□□□ 1.7
SSRP1-204ENST00000529002 CNTROBQ8N137 903 aa25.66■■□□□ 1.7
SSRP1-204ENST00000529002 RASSF10A6NK89 507 aa25.65■■□□□ 1.7
SSRP1-204ENST00000529002 FAM177BA6PVY3 158 aa25.65■■□□□ 1.7
SSRP1-204ENST00000529002 CC2D1BQ5T0F9 858 aaKnown RBP25.65■■□□□ 1.7
SSRP1-204ENST00000529002 NPR1P16066 1061 aa25.64■■□□□ 1.7
SSRP1-204ENST00000529002 WDR33Q9C0J8 1336 aaKnown RBP25.63■■□□□ 1.69
SSRP1-204ENST00000529002 U2SURPO15042 1029 aaKnown RBP25.63■■□□□ 1.69
SSRP1-204ENST00000529002 CNGB1Q14028 1251 aaPredicted RBP25.63■■□□□ 1.69
SSRP1-204ENST00000529002 COL3A1P02461 1466 aaPredicted RBP25.63■■□□□ 1.69
SSRP1-204ENST00000529002 LTBP1Q14766 1721 aa25.63■■□□□ 1.69
SSRP1-204ENST00000529002 SYNE4Q8N205 404 aa25.62■■□□□ 1.69
SSRP1-204ENST00000529002 ABT1Q9ULW3 272 aaKnown RBP25.62■■□□□ 1.69
SSRP1-204ENST00000529002 TRIM26Q12899 539 aaPredicted RBP25.61■■□□□ 1.69
SSRP1-204ENST00000529002 COL4A5P29400 1685 aa25.61■■□□□ 1.69
SSRP1-204ENST00000529002 KLRG2A4D1S0 409 aaPredicted RBP25.6■■□□□ 1.69
SSRP1-204ENST00000529002 BTBD11A6QL63 1104 aa25.6■■□□□ 1.69
SSRP1-204ENST00000529002 FZD9O00144 591 aa25.6■■□□□ 1.69
SSRP1-204ENST00000529002 IARSP41252 1262 aaKnown RBP25.6■■□□□ 1.69
SSRP1-204ENST00000529002 GAS2L2Q8NHY3 880 aa25.6■■□□□ 1.69
SSRP1-204ENST00000529002 PCGF6Q9BYE7 350 aa25.6■■□□□ 1.69
SSRP1-204ENST00000529002 CEMIPQ8WUJ3 1361 aa25.58■■□□□ 1.69
SSRP1-204ENST00000529002 TRPM7Q96QT4 1865 aa25.58■■□□□ 1.69
SSRP1-204ENST00000529002 GRM1Q13255 1194 aa25.58■■□□□ 1.69
SSRP1-204ENST00000529002 SLC51AQ86UW1 340 aa25.58■■□□□ 1.69
SSRP1-204ENST00000529002 PNMA8AQ86V59 439 aaPredicted RBP25.58■■□□□ 1.69
SSRP1-204ENST00000529002 PHACTR3Q96KR7 559 aa25.58■■□□□ 1.69
SSRP1-204ENST00000529002 NIP7Q9Y221 180 aaKnown RBP eCLIP25.58■■□□□ 1.69
SSRP1-204ENST00000529002 CLEC4GQ6UXB4 293 aa25.57■■□□□ 1.68
SSRP1-204ENST00000529002 RTKN2Q8IZC4 609 aa25.57■■□□□ 1.68
SSRP1-204ENST00000529002 GJA3Q9Y6H8 435 aa25.57■■□□□ 1.68
SSRP1-204ENST00000529002 CCDC85CA6NKD9 419 aa25.56■■□□□ 1.68
SSRP1-204ENST00000529002 NBPF26B4DH59 902 aa25.56■■□□□ 1.68
SSRP1-204ENST00000529002 PER1O15534 1290 aaPredicted RBP25.56■■□□□ 1.68
SSRP1-204ENST00000529002 MAP2K1Q02750 393 aaPredicted RBP25.56■■□□□ 1.68
SSRP1-204ENST00000529002 NBPF10Q6P3W6 841 aaKnown RBP25.56■■□□□ 1.68
SSRP1-204ENST00000529002 PAXIP1Q6ZW49 1069 aaPredicted RBP25.56■■□□□ 1.68
SSRP1-204ENST00000529002 NBPF15Q8N660 670 aa25.56■■□□□ 1.68
SSRP1-204ENST00000529002 DDX21Q9NR30 783 aaKnown RBP eCLIP25.56■■□□□ 1.68
SSRP1-204ENST00000529002 TSKSQ9UJT2 592 aa25.56■■□□□ 1.68
SSRP1-204ENST00000529002 KIF7Q2M1P5 1343 aa25.56■■□□□ 1.68
SSRP1-204ENST00000529002 HLFQ16534 295 aa25.55■■□□□ 1.68
SSRP1-204ENST00000529002 TPTE2Q6XPS3 522 aa25.55■■□□□ 1.68
SSRP1-204ENST00000529002 GPC2Q8N158 579 aa25.55■■□□□ 1.68
SSRP1-204ENST00000529002 THSD7BQ9C0I4 1608 aa25.55■■□□□ 1.68
SSRP1-204ENST00000529002 SNED1Q8TER0 1413 aa25.54■■□□□ 1.68
SSRP1-204ENST00000529002 CAPNS2Q96L46 248 aa25.54■■□□□ 1.68
SSRP1-204ENST00000529002 ZNF652Q9Y2D9 606 aa25.54■■□□□ 1.68
SSRP1-204ENST00000529002 CASP8AP2Q9UKL3 1982 aa25.54■■□□□ 1.68
SSRP1-204ENST00000529002 CYP4F22Q6NT55 531 aa25.53■■□□□ 1.68
SSRP1-204ENST00000529002 TRAF5O00463 557 aa25.52■■□□□ 1.68
SSRP1-204ENST00000529002 EPS15P42566 896 aa25.52■■□□□ 1.68
SSRP1-204ENST00000529002 NUP98P52948 1817 aa25.51■■□□□ 1.67
SSRP1-204ENST00000529002 PRKAR2BP31323 418 aa25.51■■□□□ 1.67
SSRP1-204ENST00000529002 JDP2Q8WYK2 163 aa25.51■■□□□ 1.67
SSRP1-204ENST00000529002 ABCC12Q96J65 1359 aa25.51■■□□□ 1.67
SSRP1-204ENST00000529002 SNRPA1P09661 255 aaKnown RBP25.5■■□□□ 1.67
SSRP1-204ENST00000529002 ALDH1B1P30837 517 aa25.5■■□□□ 1.67
SSRP1-204ENST00000529002 NUTM1Q86Y26 1132 aa25.5■■□□□ 1.67
SSRP1-204ENST00000529002 SCNN1DP51172 638 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms