RNA–Protein interactions for RNA: ENST00000528873.2

GEN1-204, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 5

Gene GEN1, Length 871 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-204ENST00000528873 GDF2Q9UK05 429 aaPredicted RBP8.66□□□□□ -1.02
GEN1-204ENST00000528873 RFX1P22670 979 aa8.65□□□□□ -1.02
GEN1-204ENST00000528873 C1orf53Q5VUE5 145 aa8.65□□□□□ -1.02
GEN1-204ENST00000528873 GAS2L2Q8NHY3 880 aa8.65□□□□□ -1.02
GEN1-204ENST00000528873 CHMP7Q8WUX9 453 aaPredicted RBP8.65□□□□□ -1.02
GEN1-204ENST00000528873 C21orf2O43822 256 aa8.64□□□□□ -1.03
GEN1-204ENST00000528873 CD33P20138 364 aa8.64□□□□□ -1.03
GEN1-204ENST00000528873 IRS1P35568 1242 aa8.64□□□□□ -1.03
GEN1-204ENST00000528873 SAMD5Q5TGI4 173 aa8.64□□□□□ -1.03
GEN1-204ENST00000528873 GOLGA6L1Q8N7Z2 621 aa8.64□□□□□ -1.03
GEN1-204ENST00000528873 EDARADDQ8WWZ3 215 aa8.64□□□□□ -1.03
GEN1-204ENST00000528873 PHACTR1Q9C0D0 580 aa8.64□□□□□ -1.03
GEN1-204ENST00000528873 GGA1Q9UJY5 639 aa8.64□□□□□ -1.03
GEN1-204ENST00000528873 GPC6Q9Y625 555 aaPredicted RBP8.64□□□□□ -1.03
GEN1-204ENST00000528873 DNMT3AQ9Y6K1 912 aaPredicted RBP8.64□□□□□ -1.03
GEN1-204ENST00000528873 LGR5O75473 907 aa8.63□□□□□ -1.03
GEN1-204ENST00000528873 FAM157BP0CG42 384 aa8.63□□□□□ -1.03
GEN1-204ENST00000528873 HIRAP54198 1017 aaPredicted RBP8.63□□□□□ -1.03
GEN1-204ENST00000528873 RASSF7Q02833 373 aa8.63□□□□□ -1.03
GEN1-204ENST00000528873 FAM182BQ5T319 152 aa8.63□□□□□ -1.03
GEN1-204ENST00000528873 C1orf229Q6ZS94 237 aaPredicted RBP8.63□□□□□ -1.03
GEN1-204ENST00000528873 TMEM151AQ8N4L1 468 aa8.63□□□□□ -1.03
GEN1-204ENST00000528873 MARK1Q9P0L2 795 aa8.63□□□□□ -1.03
GEN1-204ENST00000528873 HCN2Q9UL51 889 aa8.63□□□□□ -1.03
GEN1-204ENST00000528873 CNTNAP5Q8WYK1 1306 aa8.62□□□□□ -1.03
GEN1-204ENST00000528873 GSK3AP49840 483 aa8.62□□□□□ -1.03
GEN1-204ENST00000528873 POTEAQ6S8J7 498 aa8.62□□□□□ -1.03
GEN1-204ENST00000528873 STAG2Q8N3U4 1231 aa8.62□□□□□ -1.03
GEN1-204ENST00000528873 BEND7Q8N7W2 519 aaPredicted RBP8.62□□□□□ -1.03
GEN1-204ENST00000528873 C2orf49Q9BVC5 232 aaPredicted RBP8.62□□□□□ -1.03
GEN1-204ENST00000528873 ANKIB1Q9P2G1 1089 aa8.62□□□□□ -1.03
GEN1-204ENST00000528873 GDF11O95390 407 aa8.61□□□□□ -1.03
GEN1-204ENST00000528873 ARAFP10398 606 aa8.61□□□□□ -1.03
GEN1-204ENST00000528873 LAMC2Q13753 1193 aa8.61□□□□□ -1.03
GEN1-204ENST00000528873 PODNQ7Z5L7 613 aa8.61□□□□□ -1.03
GEN1-204ENST00000528873 ALDH16A1Q8IZ83 802 aa8.61□□□□□ -1.03
GEN1-204ENST00000528873 FAM200AQ8TCP9 573 aa8.61□□□□□ -1.03
GEN1-204ENST00000528873 STRN4Q9NRL3 753 aa8.61□□□□□ -1.03
GEN1-204ENST00000528873 PRR12Q9ULL5 1215 aa8.61□□□□□ -1.03
GEN1-204ENST00000528873 NEURL1BA8MQ27 555 aa8.6□□□□□ -1.03
GEN1-204ENST00000528873 SHISA8B8ZZ34 492 aa8.6□□□□□ -1.03
GEN1-204ENST00000528873 EFSO43281 561 aa8.6□□□□□ -1.03
GEN1-204ENST00000528873 NGLY1Q96IV0 654 aa8.6□□□□□ -1.03
GEN1-204ENST00000528873 ARXQ96QS3 562 aa8.6□□□□□ -1.03
GEN1-204ENST00000528873 PHF20L1A8MW92 1017 aa8.59□□□□□ -1.03
GEN1-204ENST00000528873 IGFBP4P22692 258 aa8.59□□□□□ -1.03
GEN1-204ENST00000528873 AMPD1P23109 780 aa8.59□□□□□ -1.03
GEN1-204ENST00000528873 KANK3Q6NY19 840 aa8.59□□□□□ -1.03
GEN1-204ENST00000528873 SLCO4C1Q6ZQN7 724 aa8.59□□□□□ -1.03
GEN1-204ENST00000528873 HSH2DQ96JZ2 352 aa8.59□□□□□ -1.03
GEN1-204ENST00000528873 SUSD3Q96L08 255 aa8.59□□□□□ -1.03
GEN1-204ENST00000528873 RRAGCQ9HB90 399 aa8.59□□□□□ -1.03
GEN1-204ENST00000528873 ADH6P28332 368 aa8.58□□□□□ -1.04
GEN1-204ENST00000528873 SFSWAPQ12872 951 aaKnown RBP8.58□□□□□ -1.04
GEN1-204ENST00000528873 ZNF280CQ8ND82 737 aa8.58□□□□□ -1.04
GEN1-204ENST00000528873 CEP63Q96MT8 703 aa8.58□□□□□ -1.04
GEN1-204ENST00000528873 AVENQ9NQS1 362 aaPredicted RBP8.58□□□□□ -1.04
GEN1-204ENST00000528873 EPXP11678 715 aa8.57□□□□□ -1.04
GEN1-204ENST00000528873 PCBP4P57723 403 aaKnown RBP8.57□□□□□ -1.04
GEN1-204ENST00000528873 KCTD17Q8N5Z5 321 aa8.57□□□□□ -1.04
GEN1-204ENST00000528873 BTBD6Q96KE9 485 aa8.57□□□□□ -1.04
GEN1-204ENST00000528873 KLF15Q9UIH9 416 aa8.57□□□□□ -1.04
GEN1-204ENST00000528873 SNRPNP63162 240 aaKnown RBP8.56□□□□□ -1.04
GEN1-204ENST00000528873 HIF1AQ16665 826 aa8.56□□□□□ -1.04
GEN1-204ENST00000528873 NOVA2Q9UNW9 492 aaKnown RBP8.56□□□□□ -1.04
GEN1-204ENST00000528873 GRIN2CQ14957 1233 aa8.55□□□□□ -1.04
GEN1-204ENST00000528873 ZNF468Q5VIY5 522 aaPredicted RBP8.55□□□□□ -1.04
GEN1-204ENST00000528873 BRD7Q9NPI1 651 aa8.55□□□□□ -1.04
GEN1-204ENST00000528873 WEE1P30291 646 aa8.54□□□□□ -1.04
GEN1-204ENST00000528873 RTN1Q16799 776 aa8.54□□□□□ -1.04
GEN1-204ENST00000528873 SYT9Q86SS6 491 aa8.54□□□□□ -1.04
GEN1-204ENST00000528873 FCHSD1Q86WN1 690 aa8.54□□□□□ -1.04
GEN1-204ENST00000528873 VTI1AQ96AJ9 217 aa8.54□□□□□ -1.04
GEN1-204ENST00000528873 CCDC97Q96F63 343 aaPredicted RBP8.54□□□□□ -1.04
GEN1-204ENST00000528873 MKL2Q9ULH7 1088 aa8.54□□□□□ -1.04
GEN1-204ENST00000528873 KCNH4Q9UQ05 1017 aa8.54□□□□□ -1.04
GEN1-204ENST00000528873 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.53□□□□□ -1.04
GEN1-204ENST00000528873 SLC30A3Q99726 388 aa8.53□□□□□ -1.04
GEN1-204ENST00000528873 ARID3CA6NKF2 412 aa8.52□□□□□ -1.05
GEN1-204ENST00000528873 FOXO3O43524 673 aa8.52□□□□□ -1.05
GEN1-204ENST00000528873 SRPK2P78362 688 aaKnown RBP8.52□□□□□ -1.05
GEN1-204ENST00000528873 ELOAQ14241 798 aaKnown RBP8.52□□□□□ -1.05
GEN1-204ENST00000528873 BTLAQ7Z6A9 289 aa8.52□□□□□ -1.05
GEN1-204ENST00000528873 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.52□□□□□ -1.05
GEN1-204ENST00000528873 SERPINA10Q9UK55 444 aa8.52□□□□□ -1.05
GEN1-204ENST00000528873 ALAS2P22557 587 aa8.51□□□□□ -1.05
GEN1-204ENST00000528873 KCNQ4P56696 695 aa8.51□□□□□ -1.05
GEN1-204ENST00000528873 TYRO3Q06418 890 aa8.51□□□□□ -1.05
GEN1-204ENST00000528873 SPEM2Q0P670 501 aa8.51□□□□□ -1.05
GEN1-204ENST00000528873 NEUROD1Q13562 356 aa8.51□□□□□ -1.05
GEN1-204ENST00000528873 CHSY3Q70JA7 882 aa8.51□□□□□ -1.05
GEN1-204ENST00000528873 SIN3BO75182 1162 aa8.5□□□□□ -1.05
GEN1-204ENST00000528873 LINC00114Q6XXX2 140 aa8.5□□□□□ -1.05
GEN1-204ENST00000528873 PRIMPOLQ96LW4 560 aa8.5□□□□□ -1.05
GEN1-204ENST00000528873 KLK14Q9P0G3 267 aa8.5□□□□□ -1.05
GEN1-204ENST00000528873 ZMIZ1Q9ULJ6 1067 aa8.5□□□□□ -1.05
GEN1-204ENST00000528873 ACIN1Q9UKV3 1341 aaKnown RBP8.5□□□□□ -1.05
GEN1-204ENST00000528873 ATG7O95352 703 aa8.49□□□□□ -1.05
GEN1-204ENST00000528873 HOXB4P17483 251 aaPredicted RBP8.49□□□□□ -1.05
GEN1-204ENST00000528873 SWI5Q1ZZU3 235 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms