RNA–Protein interactions for RNA: ENST00000528870.5

TRIM29-210, Transcript of tripartite motif containing 29, humanhuman

TSL 2 BASIC

Gene TRIM29, Length 2,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-210ENST00000528870 LIMCH1Q9UPQ0 1083 aa18.38■□□□□ 0.53
TRIM29-210ENST00000528870 PXDNQ92626 1479 aa18.38■□□□□ 0.53
TRIM29-210ENST00000528870 CRYBG1Q9Y4K1 1723 aa18.38■□□□□ 0.53
TRIM29-210ENST00000528870 IFIT2P09913 472 aaKnown RBP18.38■□□□□ 0.53
TRIM29-210ENST00000528870 PROSER3Q2NL68 480 aa18.38■□□□□ 0.53
TRIM29-210ENST00000528870 GDPD2Q9HCC8 539 aa18.38■□□□□ 0.53
TRIM29-210ENST00000528870 RPAP1Q9BWH6 1393 aaPredicted RBP18.37■□□□□ 0.53
TRIM29-210ENST00000528870 GCP02774 474 aa18.37■□□□□ 0.53
TRIM29-210ENST00000528870 USP48Q86UV5 1035 aa18.37■□□□□ 0.53
TRIM29-210ENST00000528870 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.37■□□□□ 0.53
TRIM29-210ENST00000528870 OVOS2A0A0G2JMS6 1433 aa18.37■□□□□ 0.53
TRIM29-210ENST00000528870 PHF14O94880 888 aa18.37■□□□□ 0.53
TRIM29-210ENST00000528870 ANKRD24Q8TF21 1146 aa18.37■□□□□ 0.53
TRIM29-210ENST00000528870 TSPY26PQ9H489 355 aa18.37■□□□□ 0.53
TRIM29-210ENST00000528870 GADD45BO75293 160 aaPredicted RBP18.36■□□□□ 0.53
TRIM29-210ENST00000528870 CASTP20810 708 aaKnown RBP18.36■□□□□ 0.53
TRIM29-210ENST00000528870 CWF19L2Q2TBE0 894 aaKnown RBP18.36■□□□□ 0.53
TRIM29-210ENST00000528870 RUFY3Q7L099 469 aa18.36■□□□□ 0.53
TRIM29-210ENST00000528870 ARHGEF25Q86VW2 580 aa18.36■□□□□ 0.53
TRIM29-210ENST00000528870 RNF214Q8ND24 703 aa18.36■□□□□ 0.53
TRIM29-210ENST00000528870 LMOD2Q6P5Q4 547 aa18.35■□□□□ 0.53
TRIM29-210ENST00000528870 LARP6Q9BRS8 491 aaKnown RBP18.35■□□□□ 0.53
TRIM29-210ENST00000528870 HYPKQ9NX55 129 aa18.35■□□□□ 0.53
TRIM29-210ENST00000528870 NOL7Q9UMY1 257 aaKnown RBP18.35■□□□□ 0.53
TRIM29-210ENST00000528870 PA2G4Q9UQ80 394 aaKnown RBP18.35■□□□□ 0.53
TRIM29-210ENST00000528870 XPCQ01831 940 aaPredicted RBP18.35■□□□□ 0.53
TRIM29-210ENST00000528870 ZSCAN22P10073 491 aaPredicted RBP18.34■□□□□ 0.53
TRIM29-210ENST00000528870 AACSQ86V21 672 aa18.34■□□□□ 0.53
TRIM29-210ENST00000528870 SMC3Q9UQE7 1217 aa18.34■□□□□ 0.53
TRIM29-210ENST00000528870 HEG1Q9ULI3 1381 aa18.34■□□□□ 0.53
TRIM29-210ENST00000528870 PRAMEF22A3QJZ6 481 aa18.34■□□□□ 0.53
TRIM29-210ENST00000528870 STX6O43752 255 aa18.34■□□□□ 0.53
TRIM29-210ENST00000528870 DDX58O95786 925 aaKnown RBP18.34■□□□□ 0.53
TRIM29-210ENST00000528870 CPA1P15085 419 aa18.34■□□□□ 0.53
TRIM29-210ENST00000528870 EVI5LQ96CN4 794 aa18.34■□□□□ 0.53
TRIM29-210ENST00000528870 PTH1RQ03431 593 aa18.33■□□□□ 0.53
TRIM29-210ENST00000528870 TMEM87AQ8NBN3 555 aa18.33■□□□□ 0.53
TRIM29-210ENST00000528870 LINS1Q8NG48 757 aa18.33■□□□□ 0.53
TRIM29-210ENST00000528870 ZNF142P52746 1687 aaPredicted RBP18.33■□□□□ 0.52
TRIM29-210ENST00000528870 GRM8O00222 908 aa18.33■□□□□ 0.52
TRIM29-210ENST00000528870 SYT1P21579 422 aa18.33■□□□□ 0.52
TRIM29-210ENST00000528870 PRPF40BQ6NWY9 871 aaKnown RBP18.33■□□□□ 0.52
TRIM29-210ENST00000528870 JAKMIP1Q96N16 626 aaKnown RBP18.33■□□□□ 0.52
TRIM29-210ENST00000528870 ORAI2Q96SN7 254 aa18.33■□□□□ 0.52
TRIM29-210ENST00000528870 CNPY2Q9Y2B0 182 aa18.33■□□□□ 0.52
TRIM29-210ENST00000528870 OFD1O75665 1012 aa18.32■□□□□ 0.52
TRIM29-210ENST00000528870 PDRG1Q9NUG6 133 aa18.32■□□□□ 0.52
TRIM29-210ENST00000528870 SLIT3O75094 1523 aa18.32■□□□□ 0.52
TRIM29-210ENST00000528870 AIMP1Q12904 312 aaKnown RBP18.31■□□□□ 0.52
TRIM29-210ENST00000528870 VPS53Q5VIR6 699 aa18.31■□□□□ 0.52
TRIM29-210ENST00000528870 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.31■□□□□ 0.52
TRIM29-210ENST00000528870 SUCLG2Q96I99 432 aa18.31■□□□□ 0.52
TRIM29-210ENST00000528870 CCDC39Q9UFE4 941 aa18.31■□□□□ 0.52
TRIM29-210ENST00000528870 ATP6V1DQ9Y5K8 247 aa18.31■□□□□ 0.52
TRIM29-210ENST00000528870 CYP46A1Q9Y6A2 500 aa18.31■□□□□ 0.52
TRIM29-210ENST00000528870 TPM2P07951 284 aa18.31■□□□□ 0.52
TRIM29-210ENST00000528870 G3BP1Q13283 466 aaKnown RBP eCLIP18.31■□□□□ 0.52
TRIM29-210ENST00000528870 ZKSCAN1P17029 563 aaPredicted RBP18.3■□□□□ 0.52
TRIM29-210ENST00000528870 ADCK5Q3MIX3 580 aa18.3■□□□□ 0.52
TRIM29-210ENST00000528870 TM6SF1Q9BZW5 370 aa18.3■□□□□ 0.52
TRIM29-210ENST00000528870 BICC1Q9H694 974 aaKnown RBP18.3■□□□□ 0.52
TRIM29-210ENST00000528870 DDX21Q9NR30 783 aaKnown RBP eCLIP18.3■□□□□ 0.52
TRIM29-210ENST00000528870 F13A1P00488 732 aa18.3■□□□□ 0.52
TRIM29-210ENST00000528870 CCDC83Q8IWF9 413 aa18.3■□□□□ 0.52
TRIM29-210ENST00000528870 ZSCAN31Q96LW9 406 aaPredicted RBP18.3■□□□□ 0.52
TRIM29-210ENST00000528870 ZSWIM6Q9HCJ5 1215 aa18.3■□□□□ 0.52
TRIM29-210ENST00000528870 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.3■□□□□ 0.52
TRIM29-210ENST00000528870 CCDC171Q6TFL3 1326 aa18.3■□□□□ 0.52
TRIM29-210ENST00000528870 HIP1O00291 1037 aa18.29■□□□□ 0.52
TRIM29-210ENST00000528870 ZNF500O60304 480 aaPredicted RBP18.29■□□□□ 0.52
TRIM29-210ENST00000528870 LARGE1O95461 756 aa18.29■□□□□ 0.52
TRIM29-210ENST00000528870 KCNJ4P48050 445 aa18.29■□□□□ 0.52
TRIM29-210ENST00000528870 CCDC183Q5T5S1 534 aa18.29■□□□□ 0.52
TRIM29-210ENST00000528870 SH2B1Q9NRF2 756 aaPredicted RBP18.29■□□□□ 0.52
TRIM29-210ENST00000528870 ZKSCAN5Q9Y2L8 839 aa18.29■□□□□ 0.52
TRIM29-210ENST00000528870 AXIN2Q9Y2T1 843 aa18.29■□□□□ 0.52
TRIM29-210ENST00000528870 UTYO14607 1347 aa18.29■□□□□ 0.52
TRIM29-210ENST00000528870 SASH1O94885 1247 aa18.29■□□□□ 0.52
TRIM29-210ENST00000528870 KCNB2Q92953 911 aa18.29■□□□□ 0.52
TRIM29-210ENST00000528870 KAZALD1Q96I82 304 aa18.29■□□□□ 0.52
TRIM29-210ENST00000528870 GJB2P29033 226 aa18.28■□□□□ 0.52
TRIM29-210ENST00000528870 MCM5P33992 734 aa18.28■□□□□ 0.52
TRIM29-210ENST00000528870 UBE2HP62256 183 aa18.28■□□□□ 0.52
TRIM29-210ENST00000528870 RIC3Q7Z5B4 369 aa18.28■□□□□ 0.52
TRIM29-210ENST00000528870 EAF2Q96CJ1 260 aaPredicted RBP18.28■□□□□ 0.52
TRIM29-210ENST00000528870 RRP9O43818 475 aaKnown RBP18.27■□□□□ 0.52
TRIM29-210ENST00000528870 NECTIN1Q15223 517 aa18.27■□□□□ 0.52
TRIM29-210ENST00000528870 TPRNQ4KMQ1 711 aa18.27■□□□□ 0.52
TRIM29-210ENST00000528870 CCDC8Q9H0W5 538 aaPredicted RBP18.27■□□□□ 0.52
TRIM29-210ENST00000528870 FAM184AQ8NB25 1140 aa18.27■□□□□ 0.52
TRIM29-210ENST00000528870 FAM227BQ96M60 508 aa18.27■□□□□ 0.52
TRIM29-210ENST00000528870 RBM8AQ9Y5S9 174 aaKnown RBP18.27■□□□□ 0.52
TRIM29-210ENST00000528870 SIPA1L3O60292 1781 aaPredicted RBP18.27■□□□□ 0.51
TRIM29-210ENST00000528870 TCHHQ07283 1943 aa18.26■□□□□ 0.51
TRIM29-210ENST00000528870 CAMTA1Q9Y6Y1 1673 aa18.26■□□□□ 0.51
TRIM29-210ENST00000528870 FIBPO43427 364 aa18.26■□□□□ 0.51
TRIM29-210ENST00000528870 LETM1O95202 739 aaPredicted RBP18.26■□□□□ 0.51
TRIM29-210ENST00000528870 NMIQ13287 307 aaPredicted RBP18.26■□□□□ 0.51
TRIM29-210ENST00000528870 PDIA6Q15084 440 aa18.26■□□□□ 0.51
TRIM29-210ENST00000528870 SIL1Q9H173 461 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms