RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 NBPF5PQ86XG9 351 aaPredicted RBP20.6■□□□□ 0.89
CLNS1A-210ENST00000528364 NGEFQ8N5V2 710 aa20.6■□□□□ 0.89
CLNS1A-210ENST00000528364 DNAJC5GQ8N7S2 189 aa20.6■□□□□ 0.89
CLNS1A-210ENST00000528364 PDZRN3Q9UPQ7 1066 aa20.6■□□□□ 0.89
CLNS1A-210ENST00000528364 GLTPD2A6NH11 291 aa20.59■□□□□ 0.89
CLNS1A-210ENST00000528364 NEFMP07197 916 aa20.59■□□□□ 0.89
CLNS1A-210ENST00000528364 NFE2L2Q16236 605 aa20.59■□□□□ 0.89
CLNS1A-210ENST00000528364 COL11A2P13942 1736 aaPredicted RBP20.58■□□□□ 0.89
CLNS1A-210ENST00000528364 SLX4Q8IY92 1834 aa20.58■□□□□ 0.89
CLNS1A-210ENST00000528364 STYK1Q6J9G0 422 aa20.58■□□□□ 0.89
CLNS1A-210ENST00000528364 CNKSR1Q969H4 720 aa20.58■□□□□ 0.89
CLNS1A-210ENST00000528364 NIP7Q9Y221 180 aaKnown RBP eCLIP20.58■□□□□ 0.89
CLNS1A-210ENST00000528364 DLG5Q8TDM6 1919 aa20.58■□□□□ 0.88
CLNS1A-210ENST00000528364 BCORQ6W2J9 1755 aa20.57■□□□□ 0.88
CLNS1A-210ENST00000528364 EIF4A1P60842 406 aaKnown RBP20.57■□□□□ 0.88
CLNS1A-210ENST00000528364 PRPF40BQ6NWY9 871 aaKnown RBP20.57■□□□□ 0.88
CLNS1A-210ENST00000528364 MASTLQ96GX5 879 aa20.57■□□□□ 0.88
CLNS1A-210ENST00000528364 POTECB2RU33 542 aa20.56■□□□□ 0.88
CLNS1A-210ENST00000528364 ZNF652Q9Y2D9 606 aa20.56■□□□□ 0.88
CLNS1A-210ENST00000528364 RRP7AQ9Y3A4 280 aaKnown RBP20.56■□□□□ 0.88
CLNS1A-210ENST00000528364 ZC3H4Q9UPT8 1303 aaKnown RBP20.55■□□□□ 0.88
CLNS1A-210ENST00000528364 VEGFAP15692 232 aaPredicted RBP20.55■□□□□ 0.88
CLNS1A-210ENST00000528364 FSTL1Q12841 308 aa20.55■□□□□ 0.88
CLNS1A-210ENST00000528364 ERFEQ4G0M1 354 aa20.55■□□□□ 0.88
CLNS1A-210ENST00000528364 TPTE2Q6XPS3 522 aa20.55■□□□□ 0.88
CLNS1A-210ENST00000528364 PNISRQ8TF01 805 aaKnown RBP20.55■□□□□ 0.88
CLNS1A-210ENST00000528364 TTLL7Q6ZT98 887 aa20.54■□□□□ 0.88
CLNS1A-210ENST00000528364 OLFM4Q6UX06 510 aa20.53■□□□□ 0.88
CLNS1A-210ENST00000528364 C7orf43Q8WVR3 580 aa20.53■□□□□ 0.88
CLNS1A-210ENST00000528364 TAOK3Q9H2K8 898 aa20.53■□□□□ 0.88
CLNS1A-210ENST00000528364 FER1L6Q2WGJ9 1857 aa20.53■□□□□ 0.88
CLNS1A-210ENST00000528364 KLRG2A4D1S0 409 aaPredicted RBP20.52■□□□□ 0.88
CLNS1A-210ENST00000528364 MYL6BP14649 208 aa20.52■□□□□ 0.88
CLNS1A-210ENST00000528364 DDX10Q13206 875 aaKnown RBP20.52■□□□□ 0.88
CLNS1A-210ENST00000528364 SMC1BQ8NDV3 1235 aa20.52■□□□□ 0.88
CLNS1A-210ENST00000528364 CACNA1SQ13698 1873 aa20.52■□□□□ 0.87
CLNS1A-210ENST00000528364 MAPK8IP3Q9UPT6 1336 aa20.52■□□□□ 0.87
CLNS1A-210ENST00000528364 TNRC6CQ9HCJ0 1690 aaKnown RBP20.51■□□□□ 0.87
CLNS1A-210ENST00000528364 NPR1P16066 1061 aa20.51■□□□□ 0.87
CLNS1A-210ENST00000528364 DPY19L2Q6NUT2 758 aa20.51■□□□□ 0.87
CLNS1A-210ENST00000528364 RGL2O15211 777 aa20.5■□□□□ 0.87
CLNS1A-210ENST00000528364 RIPK4P57078 832 aa20.5■□□□□ 0.87
CLNS1A-210ENST00000528364 NUTM1Q86Y26 1132 aa20.5■□□□□ 0.87
CLNS1A-210ENST00000528364 PNNQ9H307 717 aaKnown RBP20.5■□□□□ 0.87
CLNS1A-210ENST00000528364 LTBP3Q9NS15 1303 aa20.5■□□□□ 0.87
CLNS1A-210ENST00000528364 KDM3BQ7LBC6 1761 aa20.49■□□□□ 0.87
CLNS1A-210ENST00000528364 DDNO94850 711 aaPredicted RBP20.49■□□□□ 0.87
CLNS1A-210ENST00000528364 GTF2E1P29083 439 aaPredicted RBP20.49■□□□□ 0.87
CLNS1A-210ENST00000528364 RALBP1Q15311 655 aa20.49■□□□□ 0.87
CLNS1A-210ENST00000528364 ZBTB3Q9H5J0 574 aa20.49■□□□□ 0.87
CLNS1A-210ENST00000528364 TIAM2Q8IVF5 1701 aa20.49■□□□□ 0.87
CLNS1A-210ENST00000528364 MAP3K15Q6ZN16 1313 aa20.49■□□□□ 0.87
CLNS1A-210ENST00000528364 ERVV-1B6SEH8 477 aa20.48■□□□□ 0.87
CLNS1A-210ENST00000528364 GPTP24298 496 aa20.48■□□□□ 0.87
CLNS1A-210ENST00000528364 DICER1Q9UPY3 1922 aaKnown RBP20.48■□□□□ 0.87
CLNS1A-210ENST00000528364 WDR90Q96KV7 1748 aa20.47■□□□□ 0.87
CLNS1A-210ENST00000528364 SOGA3Q5TF21 947 aa20.47■□□□□ 0.87
CLNS1A-210ENST00000528364 IFFO2Q5TF58 517 aa20.47■□□□□ 0.87
CLNS1A-210ENST00000528364 TSPYL4Q9UJ04 414 aa20.47■□□□□ 0.87
CLNS1A-210ENST00000528364 EIF2S2P20042 333 aaKnown RBP20.46■□□□□ 0.87
CLNS1A-210ENST00000528364 TMPOP42166 694 aaKnown RBP20.46■□□□□ 0.87
CLNS1A-210ENST00000528364 CCDC93Q567U6 631 aa20.46■□□□□ 0.87
CLNS1A-210ENST00000528364 KIF6Q6ZMV9 814 aa20.46■□□□□ 0.87
CLNS1A-210ENST00000528364 CCDC146Q8IYE0 955 aa20.46■□□□□ 0.87
CLNS1A-210ENST00000528364 KLRG1Q96E93 195 aa20.46■□□□□ 0.87
CLNS1A-210ENST00000528364 ZNF277Q9NRM2 450 aaPredicted RBP20.46■□□□□ 0.87
CLNS1A-210ENST00000528364 LAMB4A4D0S4 1761 aa20.45■□□□□ 0.86
CLNS1A-210ENST00000528364 ANXA1P04083 346 aa20.45■□□□□ 0.86
CLNS1A-210ENST00000528364 SUSD4Q5VX71 490 aa20.45■□□□□ 0.86
CLNS1A-210ENST00000528364 NUP98P52948 1817 aa20.45■□□□□ 0.86
CLNS1A-210ENST00000528364 ABCC12Q96J65 1359 aa20.45■□□□□ 0.86
CLNS1A-210ENST00000528364 POTEIP0CG38 1075 aa20.44■□□□□ 0.86
CLNS1A-210ENST00000528364 POTEJP0CG39 1038 aa20.44■□□□□ 0.86
CLNS1A-210ENST00000528364 PDIA6Q15084 440 aa20.44■□□□□ 0.86
CLNS1A-210ENST00000528364 NEUROD2Q15784 382 aa20.44■□□□□ 0.86
CLNS1A-210ENST00000528364 PROSER3Q2NL68 480 aa20.44■□□□□ 0.86
CLNS1A-210ENST00000528364 UBN2Q6ZU65 1347 aa20.44■□□□□ 0.86
CLNS1A-210ENST00000528364 ALDH1B1P30837 517 aa20.43■□□□□ 0.86
CLNS1A-210ENST00000528364 FKBP4Q02790 459 aaKnown RBP eCLIP20.43■□□□□ 0.86
CLNS1A-210ENST00000528364 LRP10Q7Z4F1 713 aa20.43■□□□□ 0.86
CLNS1A-210ENST00000528364 SLC51AQ86UW1 340 aa20.43■□□□□ 0.86
CLNS1A-210ENST00000528364 ZNF34Q8IZ26 560 aa20.43■□□□□ 0.86
CLNS1A-210ENST00000528364 NECTIN2Q92692 538 aa20.43■□□□□ 0.86
CLNS1A-210ENST00000528364 NYXQ9GZU5 481 aa20.43■□□□□ 0.86
CLNS1A-210ENST00000528364 ARFGEF2Q9Y6D5 1785 aa20.43■□□□□ 0.86
CLNS1A-210ENST00000528364 SYNE4Q8N205 404 aa20.42■□□□□ 0.86
CLNS1A-210ENST00000528364 CRY2Q49AN0 593 aa20.41■□□□□ 0.86
CLNS1A-210ENST00000528364 GIGYF2Q6Y7W6 1299 aaKnown RBP20.41■□□□□ 0.86
CLNS1A-210ENST00000528364 C3orf67Q6ZVT6 689 aa20.41■□□□□ 0.86
CLNS1A-210ENST00000528364 RTKN2Q8IZC4 609 aa20.41■□□□□ 0.86
CLNS1A-210ENST00000528364 KRT24Q2M2I5 525 aa20.4■□□□□ 0.86
CLNS1A-210ENST00000528364 JMYQ8N9B5 988 aa20.4■□□□□ 0.86
CLNS1A-210ENST00000528364 ZNF541Q9H0D2 1346 aa20.4■□□□□ 0.86
CLNS1A-210ENST00000528364 ERBB4Q15303 1308 aa20.39■□□□□ 0.85
CLNS1A-210ENST00000528364 MYBBP1AQ9BQG0 1328 aaKnown RBP20.39■□□□□ 0.85
CLNS1A-210ENST00000528364 TCERG1O14776 1098 aaKnown RBP20.39■□□□□ 0.85
CLNS1A-210ENST00000528364 NTSR2O95665 410 aa20.39■□□□□ 0.85
CLNS1A-210ENST00000528364 CHADLQ6NUI6 762 aa20.38■□□□□ 0.85
CLNS1A-210ENST00000528364 TRIM35Q9UPQ4 493 aa20.38■□□□□ 0.85
CLNS1A-210ENST00000528364 LAS1LQ9Y4W2 734 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms