RNA–Protein interactions for RNA: ENST00000527951.5

PDZD3-208, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-208ENST00000527951 PASKQ96RG2 1323 aa23.1■■□□□ 1.29
PDZD3-208ENST00000527951 CNKSR1Q969H4 720 aa23.1■■□□□ 1.29
PDZD3-208ENST00000527951 MKRN1Q9UHC7 482 aaKnown RBP23.1■■□□□ 1.29
PDZD3-208ENST00000527951 GNAT3A8MTJ3 354 aa23.09■■□□□ 1.29
PDZD3-208ENST00000527951 TEFQ10587 303 aa23.09■■□□□ 1.29
PDZD3-208ENST00000527951 SETDB2Q96T68 719 aa23.09■■□□□ 1.29
PDZD3-208ENST00000527951 CNTNAP1P78357 1384 aa23.09■■□□□ 1.29
PDZD3-208ENST00000527951 C7orf43Q8WVR3 580 aa23.08■■□□□ 1.29
PDZD3-208ENST00000527951 L3MBTL3Q96JM7 780 aaPredicted RBP23.08■■□□□ 1.29
PDZD3-208ENST00000527951 KCNQ3O43525 872 aa23.07■■□□□ 1.28
PDZD3-208ENST00000527951 CC2D1BQ5T0F9 858 aaKnown RBP23.07■■□□□ 1.28
PDZD3-208ENST00000527951 GAS2L2Q8NHY3 880 aa23.07■■□□□ 1.28
PDZD3-208ENST00000527951 MASTLQ96GX5 879 aa23.07■■□□□ 1.28
PDZD3-208ENST00000527951 FMNL2Q96PY5 1086 aa23.07■■□□□ 1.28
PDZD3-208ENST00000527951 ST5P78524 1137 aa23.06■■□□□ 1.28
PDZD3-208ENST00000527951 SOGA3Q5TF21 947 aa23.06■■□□□ 1.28
PDZD3-208ENST00000527951 FOXN1O15353 648 aa23.05■■□□□ 1.28
PDZD3-208ENST00000527951 TAF1DQ9H5J8 278 aaPredicted RBP23.05■■□□□ 1.28
PDZD3-208ENST00000527951 NPC1L1Q9UHC9 1359 aa23.04■■□□□ 1.28
PDZD3-208ENST00000527951 LDHDQ86WU2 507 aa23.04■■□□□ 1.28
PDZD3-208ENST00000527951 DZIP3Q86Y13 1208 aaKnown RBP23.04■■□□□ 1.28
PDZD3-208ENST00000527951 IQCA1LA6NCM1 817 aa23.03■■□□□ 1.28
PDZD3-208ENST00000527951 ZNF541Q9H0D2 1346 aa23.03■■□□□ 1.28
PDZD3-208ENST00000527951 KLRG2A4D1S0 409 aaPredicted RBP23.02■■□□□ 1.28
PDZD3-208ENST00000527951 U2SURPO15042 1029 aaKnown RBP23.02■■□□□ 1.28
PDZD3-208ENST00000527951 ITGBL1O95965 494 aaPredicted RBP23.02■■□□□ 1.28
PDZD3-208ENST00000527951 PIP4K2AP48426 406 aaPredicted RBP23.02■■□□□ 1.28
PDZD3-208ENST00000527951 USP16Q9Y5T5 823 aa23.02■■□□□ 1.28
PDZD3-208ENST00000527951 SNED1Q8TER0 1413 aa23.01■■□□□ 1.27
PDZD3-208ENST00000527951 PRAMEF22A3QJZ6 481 aa23.01■■□□□ 1.27
PDZD3-208ENST00000527951 CCDC93Q567U6 631 aa23.01■■□□□ 1.27
PDZD3-208ENST00000527951 PHACTR3Q96KR7 559 aa23.01■■□□□ 1.27
PDZD3-208ENST00000527951 LAMB4A4D0S4 1761 aa23■■□□□ 1.27
PDZD3-208ENST00000527951 NPHP1O15259 732 aa23■■□□□ 1.27
PDZD3-208ENST00000527951 CLEC4GQ6UXB4 293 aa23■■□□□ 1.27
PDZD3-208ENST00000527951 PRDM10Q9NQV6 1147 aa23■■□□□ 1.27
PDZD3-208ENST00000527951 BTBD11A6QL63 1104 aa22.99■■□□□ 1.27
PDZD3-208ENST00000527951 FKBP4Q02790 459 aaKnown RBP eCLIP22.99■■□□□ 1.27
PDZD3-208ENST00000527951 OLFM4Q6UX06 510 aa22.99■■□□□ 1.27
PDZD3-208ENST00000527951 NBPF5PQ86XG9 351 aaPredicted RBP22.99■■□□□ 1.27
PDZD3-208ENST00000527951 NPR1P16066 1061 aa22.98■■□□□ 1.27
PDZD3-208ENST00000527951 VEGFBP49765 207 aa22.98■■□□□ 1.27
PDZD3-208ENST00000527951 NPM2Q86SE8 214 aaKnown RBP22.98■■□□□ 1.27
PDZD3-208ENST00000527951 RSPH6AQ9H0K4 717 aa22.98■■□□□ 1.27
PDZD3-208ENST00000527951 ZNF277Q9NRM2 450 aaPredicted RBP22.98■■□□□ 1.27
PDZD3-208ENST00000527951 TMEM88BA6NKF7 163 aa22.97■■□□□ 1.27
PDZD3-208ENST00000527951 LTBP1Q14766 1721 aa22.96■■□□□ 1.27
PDZD3-208ENST00000527951 NUP98P52948 1817 aa22.96■■□□□ 1.27
PDZD3-208ENST00000527951 NBPF26B4DH59 902 aa22.96■■□□□ 1.27
PDZD3-208ENST00000527951 PRKAR2BP31323 418 aa22.96■■□□□ 1.27
PDZD3-208ENST00000527951 NBPF10Q6P3W6 841 aaKnown RBP22.96■■□□□ 1.27
PDZD3-208ENST00000527951 NBPF15Q8N660 670 aa22.96■■□□□ 1.27
PDZD3-208ENST00000527951 THSD7BQ9C0I4 1608 aa22.96■■□□□ 1.27
PDZD3-208ENST00000527951 COL4A5P29400 1685 aa22.96■■□□□ 1.27
PDZD3-208ENST00000527951 RGL2O15211 777 aa22.95■■□□□ 1.26
PDZD3-208ENST00000527951 CTCFP49711 727 aaPredicted RBP22.94■■□□□ 1.26
PDZD3-208ENST00000527951 WBP1LQ9NX94 342 aa22.94■■□□□ 1.26
PDZD3-208ENST00000527951 HACL1Q9UJ83 578 aa22.94■■□□□ 1.26
PDZD3-208ENST00000527951 ZNF652Q9Y2D9 606 aa22.94■■□□□ 1.26
PDZD3-208ENST00000527951 FZD9O00144 591 aa22.93■■□□□ 1.26
PDZD3-208ENST00000527951 SNRPA1P09661 255 aaKnown RBP22.93■■□□□ 1.26
PDZD3-208ENST00000527951 EPHX2P34913 555 aa22.93■■□□□ 1.26
PDZD3-208ENST00000527951 EAPPQ56P03 285 aaPredicted RBP22.93■■□□□ 1.26
PDZD3-208ENST00000527951 RNF123Q5XPI4 1314 aa22.92■■□□□ 1.26
PDZD3-208ENST00000527951 RASSF10A6NK89 507 aa22.92■■□□□ 1.26
PDZD3-208ENST00000527951 NIP7Q9Y221 180 aaKnown RBP eCLIP22.92■■□□□ 1.26
PDZD3-208ENST00000527951 TRPM7Q96QT4 1865 aa22.92■■□□□ 1.26
PDZD3-208ENST00000527951 DLG5Q8TDM6 1919 aa22.91■■□□□ 1.26
PDZD3-208ENST00000527951 IARSP41252 1262 aaKnown RBP22.91■■□□□ 1.26
PDZD3-208ENST00000527951 TPTE2Q6XPS3 522 aa22.91■■□□□ 1.26
PDZD3-208ENST00000527951 RTKN2Q8IZC4 609 aa22.91■■□□□ 1.26
PDZD3-208ENST00000527951 KDM3BQ7LBC6 1761 aa22.91■■□□□ 1.26
PDZD3-208ENST00000527951 ABCC12Q96J65 1359 aa22.9■■□□□ 1.26
PDZD3-208ENST00000527951 MCM10Q7L590 875 aa22.9■■□□□ 1.26
PDZD3-208ENST00000527951 AIDAQ96BJ3 306 aa22.9■■□□□ 1.26
PDZD3-208ENST00000527951 HLFQ16534 295 aa22.89■■□□□ 1.25
PDZD3-208ENST00000527951 MAP1SQ66K74 1059 aaPredicted RBP22.89■■□□□ 1.25
PDZD3-208ENST00000527951 CNTROBQ8N137 903 aa22.89■■□□□ 1.25
PDZD3-208ENST00000527951 SYNE4Q8N205 404 aa22.89■■□□□ 1.25
PDZD3-208ENST00000527951 LBX1P52954 281 aa22.88■■□□□ 1.25
PDZD3-208ENST00000527951 CNGB1Q14028 1251 aaPredicted RBP22.88■■□□□ 1.25
PDZD3-208ENST00000527951 CRY2Q49AN0 593 aa22.88■■□□□ 1.25
PDZD3-208ENST00000527951 PNMA8AQ86V59 439 aaPredicted RBP22.88■■□□□ 1.25
PDZD3-208ENST00000527951 GPC2Q8N158 579 aa22.88■■□□□ 1.25
PDZD3-208ENST00000527951 CLEC11AQ9Y240 323 aa22.88■■□□□ 1.25
PDZD3-208ENST00000527951 FAM177BA6PVY3 158 aa22.87■■□□□ 1.25
PDZD3-208ENST00000527951 HSPA8P11142 646 aaKnown RBP22.87■■□□□ 1.25
PDZD3-208ENST00000527951 PSMD1Q99460 953 aa22.87■■□□□ 1.25
PDZD3-208ENST00000527951 ALDH1B1P30837 517 aa22.86■■□□□ 1.25
PDZD3-208ENST00000527951 DCTN1Q14203 1278 aa22.86■■□□□ 1.25
PDZD3-208ENST00000527951 RIC1Q4ADV7 1423 aa22.85■■□□□ 1.25
PDZD3-208ENST00000527951 DEFB115Q30KQ5 88 aa22.85■■□□□ 1.25
PDZD3-208ENST00000527951 WDR33Q9C0J8 1336 aaKnown RBP22.83■■□□□ 1.25
PDZD3-208ENST00000527951 SLC51AQ86UW1 340 aa22.83■■□□□ 1.25
PDZD3-208ENST00000527951 SCNN1DP51172 638 aa22.82■■□□□ 1.24
PDZD3-208ENST00000527951 NUTM1Q86Y26 1132 aa22.82■■□□□ 1.24
PDZD3-208ENST00000527951 RTF1Q92541 710 aaKnown RBP22.82■■□□□ 1.24
PDZD3-208ENST00000527951 CFAP53Q96M91 514 aa22.82■■□□□ 1.24
PDZD3-208ENST00000527951 DDX21Q9NR30 783 aaKnown RBP eCLIP22.82■■□□□ 1.24
PDZD3-208ENST00000527951 IBTKQ9P2D0 1353 aaPredicted RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms