RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 SOS1Q07889 1333 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-210ENST00000527699 DIAPH1O60610 1272 aaKnown RBP13.4□□□□□ -0.26
CAPN1-210ENST00000527699 NFIXQ14938 502 aa13.4□□□□□ -0.26
CAPN1-210ENST00000527699 SCN11AQ9UI33 1791 aa13.4□□□□□ -0.26
CAPN1-210ENST00000527699 SCN4AP35499 1836 aa13.39□□□□□ -0.27
CAPN1-210ENST00000527699 SERPINB2P05120 415 aa13.39□□□□□ -0.27
CAPN1-210ENST00000527699 BCL2L12Q9HB09 334 aa13.39□□□□□ -0.27
CAPN1-210ENST00000527699 COL15A1P39059 1388 aa13.39□□□□□ -0.27
CAPN1-210ENST00000527699 PIP4K2AP48426 406 aaPredicted RBP13.37□□□□□ -0.27
CAPN1-210ENST00000527699 C2CD5Q86YS7 1000 aa13.37□□□□□ -0.27
CAPN1-210ENST00000527699 TTC5Q8N0Z6 440 aa13.37□□□□□ -0.27
CAPN1-210ENST00000527699 SLC17A8Q8NDX2 589 aa13.37□□□□□ -0.27
CAPN1-210ENST00000527699 NARFQ9UHQ1 456 aa13.37□□□□□ -0.27
CAPN1-210ENST00000527699 TBC1D2BQ9UPU7 963 aa13.37□□□□□ -0.27
CAPN1-210ENST00000527699 ADAMTS7Q9UKP4 1686 aa13.37□□□□□ -0.27
CAPN1-210ENST00000527699 CARMIL3Q8ND23 1372 aa13.36□□□□□ -0.27
CAPN1-210ENST00000527699 MAP2K2P36507 400 aa13.36□□□□□ -0.27
CAPN1-210ENST00000527699 DDX21Q9NR30 783 aaKnown RBP eCLIP13.36□□□□□ -0.27
CAPN1-210ENST00000527699 HACL1Q9UJ83 578 aa13.36□□□□□ -0.27
CAPN1-210ENST00000527699 KCNQ3O43525 872 aa13.35□□□□□ -0.27
CAPN1-210ENST00000527699 EPHX2P34913 555 aa13.35□□□□□ -0.27
CAPN1-210ENST00000527699 FXR1P51114 621 aaKnown RBP eCLIP13.35□□□□□ -0.27
CAPN1-210ENST00000527699 TBC1D9BQ66K14 1250 aa13.35□□□□□ -0.27
CAPN1-210ENST00000527699 ZNF622Q969S3 477 aaKnown RBP eCLIP13.35□□□□□ -0.27
CAPN1-210ENST00000527699 PER1O15534 1290 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-210ENST00000527699 C21orf2O43822 256 aa13.34□□□□□ -0.27
CAPN1-210ENST00000527699 A1BGP04217 495 aa13.34□□□□□ -0.27
CAPN1-210ENST00000527699 TEFQ10587 303 aa13.34□□□□□ -0.27
CAPN1-210ENST00000527699 IL17REQ8NFR9 667 aa13.34□□□□□ -0.27
CAPN1-210ENST00000527699 ZNF496Q96IT1 587 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-210ENST00000527699 TAOK3Q9H2K8 898 aa13.34□□□□□ -0.27
CAPN1-210ENST00000527699 DLEC1Q9Y238 1755 aa13.33□□□□□ -0.28
CAPN1-210ENST00000527699 H0YIN7 160 aa13.33□□□□□ -0.28
CAPN1-210ENST00000527699 PNMA8AQ86V59 439 aaPredicted RBP13.33□□□□□ -0.28
CAPN1-210ENST00000527699 L3MBTL3Q96JM7 780 aaPredicted RBP13.33□□□□□ -0.28
CAPN1-210ENST00000527699 AFDNP55196 1824 aaKnown RBP13.33□□□□□ -0.28
CAPN1-210ENST00000527699 MRC1P22897 1456 aa13.33□□□□□ -0.28
CAPN1-210ENST00000527699 PRAMEF22A3QJZ6 481 aa13.32□□□□□ -0.28
CAPN1-210ENST00000527699 GNAT3A8MTJ3 354 aa13.32□□□□□ -0.28
CAPN1-210ENST00000527699 NPHP1O15259 732 aa13.32□□□□□ -0.28
CAPN1-210ENST00000527699 STARD3NLO95772 234 aa13.32□□□□□ -0.28
CAPN1-210ENST00000527699 FMR1Q06787 632 aaKnown RBP eCLIP13.32□□□□□ -0.28
CAPN1-210ENST00000527699 CIAPIN1Q6FI81 312 aa13.32□□□□□ -0.28
CAPN1-210ENST00000527699 EIF5P55010 431 aaKnown RBP13.31□□□□□ -0.28
CAPN1-210ENST00000527699 BRPF1P55201 1214 aaPredicted RBP13.31□□□□□ -0.28
CAPN1-210ENST00000527699 PHACTR3Q96KR7 559 aa13.31□□□□□ -0.28
CAPN1-210ENST00000527699 FER1L6Q2WGJ9 1857 aa13.31□□□□□ -0.28
CAPN1-210ENST00000527699 CUL9Q8IWT3 2517 aa13.31□□□□□ -0.28
CAPN1-210ENST00000527699 TRPM7Q96QT4 1865 aa13.3□□□□□ -0.28
CAPN1-210ENST00000527699 FAM177BA6PVY3 158 aa13.3□□□□□ -0.28
CAPN1-210ENST00000527699 PRKAR2BP31323 418 aa13.3□□□□□ -0.28
CAPN1-210ENST00000527699 ZNF790Q6PG37 636 aa13.3□□□□□ -0.28
CAPN1-210ENST00000527699 VSIG10Q8N0Z9 540 aa13.3□□□□□ -0.28
CAPN1-210ENST00000527699 TLL2Q9Y6L7 1015 aa13.3□□□□□ -0.28
CAPN1-210ENST00000527699 RNF123Q5XPI4 1314 aa13.3□□□□□ -0.28
CAPN1-210ENST00000527699 HEG1Q9ULI3 1381 aa13.3□□□□□ -0.28
CAPN1-210ENST00000527699 ADAMTSL1Q8N6G6 1762 aa13.3□□□□□ -0.28
CAPN1-210ENST00000527699 A0A087WZG4 1122 aa13.29□□□□□ -0.28
CAPN1-210ENST00000527699 BTBD11A6QL63 1104 aa13.29□□□□□ -0.28
CAPN1-210ENST00000527699 DCTN1Q14203 1278 aa13.29□□□□□ -0.28
CAPN1-210ENST00000527699 PRR5LQ6MZQ0 368 aa13.29□□□□□ -0.28
CAPN1-210ENST00000527699 GAS2L2Q8NHY3 880 aa13.29□□□□□ -0.28
CAPN1-210ENST00000527699 COL3A1P02461 1466 aaPredicted RBP13.29□□□□□ -0.28
CAPN1-210ENST00000527699 MCM10Q7L590 875 aa13.28□□□□□ -0.28
CAPN1-210ENST00000527699 NPM2Q86SE8 214 aaKnown RBP13.28□□□□□ -0.28
CAPN1-210ENST00000527699 FMNL2Q96PY5 1086 aa13.28□□□□□ -0.28
CAPN1-210ENST00000527699 USP16Q9Y5T5 823 aa13.28□□□□□ -0.28
CAPN1-210ENST00000527699 DZIP3Q86Y13 1208 aaKnown RBP13.27□□□□□ -0.29
CAPN1-210ENST00000527699 NRXN2Q9P2S2 1712 aa13.27□□□□□ -0.29
CAPN1-210ENST00000527699 UBR2Q8IWV8 1755 aa13.27□□□□□ -0.29
CAPN1-210ENST00000527699 TRAF5O00463 557 aa13.26□□□□□ -0.29
CAPN1-210ENST00000527699 CAMTA2O94983 1202 aa13.26□□□□□ -0.29
CAPN1-210ENST00000527699 U2AF1L5P0DN76 240 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-210ENST00000527699 PDE6BP35913 854 aa13.26□□□□□ -0.29
CAPN1-210ENST00000527699 U2AF1Q01081 240 aaKnown RBP eCLIP13.26□□□□□ -0.29
CAPN1-210ENST00000527699 SETDB2Q96T68 719 aa13.26□□□□□ -0.29
CAPN1-210ENST00000527699 ZNF541Q9H0D2 1346 aa13.26□□□□□ -0.29
CAPN1-210ENST00000527699 RSPH6AQ9H0K4 717 aa13.26□□□□□ -0.29
CAPN1-210ENST00000527699 LTBP3Q9NS15 1303 aa13.26□□□□□ -0.29
CAPN1-210ENST00000527699 CACNA1SQ13698 1873 aa13.25□□□□□ -0.29
CAPN1-210ENST00000527699 IL6STP40189 918 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-210ENST00000527699 CST9Q5W186 159 aa13.25□□□□□ -0.29
CAPN1-210ENST00000527699 NGEFQ8N5V2 710 aa13.25□□□□□ -0.29
CAPN1-210ENST00000527699 CNBD1Q8NA66 436 aa13.25□□□□□ -0.29
CAPN1-210ENST00000527699 BRIP1Q9BX63 1249 aa13.25□□□□□ -0.29
CAPN1-210ENST00000527699 TEX13AQ9BXU3 409 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-210ENST00000527699 MIS18AQ9NYP9 233 aa13.25□□□□□ -0.29
CAPN1-210ENST00000527699 HPS5Q9UPZ3 1129 aa13.25□□□□□ -0.29
CAPN1-210ENST00000527699 ANKRD31Q8N7Z5 1873 aa13.25□□□□□ -0.29
CAPN1-210ENST00000527699 OLFM4Q6UX06 510 aa13.24□□□□□ -0.29
CAPN1-210ENST00000527699 CTU1Q7Z7A3 348 aaKnown RBP13.24□□□□□ -0.29
CAPN1-210ENST00000527699 CFAP53Q96M91 514 aa13.24□□□□□ -0.29
CAPN1-210ENST00000527699 COL11A2P13942 1736 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-210ENST00000527699 ST5P78524 1137 aa13.23□□□□□ -0.29
CAPN1-210ENST00000527699 NBPF5PQ86XG9 351 aaPredicted RBP13.23□□□□□ -0.29
CAPN1-210ENST00000527699 SCN7AQ01118 1682 aa13.22□□□□□ -0.29
CAPN1-210ENST00000527699 CELF2O95319 508 aaKnown RBP13.22□□□□□ -0.29
CAPN1-210ENST00000527699 LMOD1P29536 600 aaPredicted RBP13.22□□□□□ -0.29
CAPN1-210ENST00000527699 PRPF40BQ6NWY9 871 aaKnown RBP13.22□□□□□ -0.29
CAPN1-210ENST00000527699 SAPCD2Q86UD0 394 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms