RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 NUDT16Q96DE0 195 aaKnown RBP8.18□□□□□ -1.1
LINC01001-202ENST00000527683 SIN3AQ96ST3 1273 aa8.18□□□□□ -1.1
LINC01001-202ENST00000527683 SPATA31A1Q5TZJ5 1347 aa8.18□□□□□ -1.1
LINC01001-202ENST00000527683 APBA3O96018 575 aa8.17□□□□□ -1.1
LINC01001-202ENST00000527683 ZC3H6P61129 1189 aaKnown RBP8.17□□□□□ -1.1
LINC01001-202ENST00000527683 NEUROD1Q13562 356 aa8.17□□□□□ -1.1
LINC01001-202ENST00000527683 DIXDC1Q155Q3 683 aa8.17□□□□□ -1.1
LINC01001-202ENST00000527683 TUSC1Q2TAM9 212 aa8.17□□□□□ -1.1
LINC01001-202ENST00000527683 NBPF8Q3BBV2 869 aa8.17□□□□□ -1.1
LINC01001-202ENST00000527683 DIEXFQ68CQ4 756 aaKnown RBP8.17□□□□□ -1.1
LINC01001-202ENST00000527683 DCAF11Q8TEB1 546 aa8.17□□□□□ -1.1
LINC01001-202ENST00000527683 NUDT12Q9BQG2 462 aa8.17□□□□□ -1.1
LINC01001-202ENST00000527683 STRN4Q9NRL3 753 aa8.17□□□□□ -1.1
LINC01001-202ENST00000527683 ANKARQ7Z5J8 1434 aa8.17□□□□□ -1.1
LINC01001-202ENST00000527683 KIF1BO60333 1816 aa8.17□□□□□ -1.1
LINC01001-202ENST00000527683 CLK2P49760 499 aaKnown RBP8.16□□□□□ -1.1
LINC01001-202ENST00000527683 EVA1CP58658 441 aa8.16□□□□□ -1.1
LINC01001-202ENST00000527683 PRPF38BQ5VTL8 546 aaKnown RBP8.16□□□□□ -1.1
LINC01001-202ENST00000527683 NUTM2GQ5VZR2 741 aa8.16□□□□□ -1.1
LINC01001-202ENST00000527683 LYPD8Q6UX82 237 aa8.16□□□□□ -1.1
LINC01001-202ENST00000527683 CDK19Q9BWU1 502 aa8.16□□□□□ -1.1
LINC01001-202ENST00000527683 ZBTB3Q9H5J0 574 aa8.16□□□□□ -1.1
LINC01001-202ENST00000527683 EVA1BQ9NVM1 165 aa8.16□□□□□ -1.1
LINC01001-202ENST00000527683 TOR4AQ9NXH8 423 aa8.16□□□□□ -1.1
LINC01001-202ENST00000527683 KIAA0232Q92628 1395 aa8.15□□□□□ -1.1
LINC01001-202ENST00000527683 CD2BP2O95400 341 aaKnown RBP8.15□□□□□ -1.1
LINC01001-202ENST00000527683 DESI1Q6ICB0 168 aa8.15□□□□□ -1.1
LINC01001-202ENST00000527683 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.15□□□□□ -1.1
LINC01001-202ENST00000527683 USP35Q9P2H5 1018 aa8.15□□□□□ -1.1
LINC01001-202ENST00000527683 PPLO60437 1756 aa8.15□□□□□ -1.11
LINC01001-202ENST00000527683 USP32Q8NFA0 1604 aa8.14□□□□□ -1.11
LINC01001-202ENST00000527683 DISP2A7MBM2 1401 aa8.14□□□□□ -1.11
LINC01001-202ENST00000527683 SPDYE5A6NIY4 337 aa8.14□□□□□ -1.11
LINC01001-202ENST00000527683 CCNYL3P0C7X3 344 aa8.14□□□□□ -1.11
LINC01001-202ENST00000527683 PDE3BQ13370 1112 aa8.14□□□□□ -1.11
LINC01001-202ENST00000527683 LAPTM4AQ15012 233 aa8.14□□□□□ -1.11
LINC01001-202ENST00000527683 PTPRNQ16849 979 aa8.14□□□□□ -1.11
LINC01001-202ENST00000527683 LARP1Q6PKG0 1096 aaKnown RBP8.14□□□□□ -1.11
LINC01001-202ENST00000527683 ACEP12821 1306 aa8.13□□□□□ -1.11
LINC01001-202ENST00000527683 F12P00748 615 aaPredicted RBP8.13□□□□□ -1.11
LINC01001-202ENST00000527683 SKIV2LQ15477 1246 aaKnown RBP8.13□□□□□ -1.11
LINC01001-202ENST00000527683 SH3D19Q5HYK7 790 aa8.13□□□□□ -1.11
LINC01001-202ENST00000527683 TRAF7Q6Q0C0 670 aa8.13□□□□□ -1.11
LINC01001-202ENST00000527683 TCP11L2Q8N4U5 519 aa8.13□□□□□ -1.11
LINC01001-202ENST00000527683 MAP10Q9P2G4 905 aa8.13□□□□□ -1.11
LINC01001-202ENST00000527683 EIF3AQ14152 1382 aaKnown RBP8.12□□□□□ -1.11
LINC01001-202ENST00000527683 ZBTB24O43167 697 aaPredicted RBP8.12□□□□□ -1.11
LINC01001-202ENST00000527683 GCP02774 474 aa8.12□□□□□ -1.11
LINC01001-202ENST00000527683 SH3BP2P78314 561 aa8.12□□□□□ -1.11
LINC01001-202ENST00000527683 KCNH2Q12809 1159 aa8.12□□□□□ -1.11
LINC01001-202ENST00000527683 NBPF14Q5TI25 921 aa8.12□□□□□ -1.11
LINC01001-202ENST00000527683 ABTB2Q8N961 1025 aa8.12□□□□□ -1.11
LINC01001-202ENST00000527683 MRGPRX2Q96LB1 330 aa8.12□□□□□ -1.11
LINC01001-202ENST00000527683 EP400Q96L91 3159 aa8.12□□□□□ -1.11
LINC01001-202ENST00000527683 DLC1Q96QB1 1528 aa8.12□□□□□ -1.11
LINC01001-202ENST00000527683 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.12□□□□□ -1.11
LINC01001-202ENST00000527683 FMN2Q9NZ56 1722 aa8.12□□□□□ -1.11
LINC01001-202ENST00000527683 WNT7AO00755 349 aa8.11□□□□□ -1.11
LINC01001-202ENST00000527683 NEUROD2Q15784 382 aa8.11□□□□□ -1.11
LINC01001-202ENST00000527683 NBPF1Q3BBV0 1214 aa8.11□□□□□ -1.11
LINC01001-202ENST00000527683 IL27Q8NEV9 243 aa8.11□□□□□ -1.11
LINC01001-202ENST00000527683 DDRGK1Q96HY6 314 aa8.11□□□□□ -1.11
LINC01001-202ENST00000527683 RSPH6AQ9H0K4 717 aa8.11□□□□□ -1.11
LINC01001-202ENST00000527683 UNC93B1Q9H1C4 597 aa8.11□□□□□ -1.11
LINC01001-202ENST00000527683 THRAP3Q9Y2W1 955 aaKnown RBP8.11□□□□□ -1.11
LINC01001-202ENST00000527683 POLR3AO14802 1390 aaPredicted RBP8.1□□□□□ -1.11
LINC01001-202ENST00000527683 PARD3Q8TEW0 1356 aa8.1□□□□□ -1.11
LINC01001-202ENST00000527683 ADGRB1O14514 1584 aa8.1□□□□□ -1.11
LINC01001-202ENST00000527683 PLSCR1O15162 318 aa8.1□□□□□ -1.11
LINC01001-202ENST00000527683 SIAH2O43255 324 aa8.1□□□□□ -1.11
LINC01001-202ENST00000527683 KCNQ2O43526 872 aa8.1□□□□□ -1.11
LINC01001-202ENST00000527683 YY1P25490 414 aa8.1□□□□□ -1.11
LINC01001-202ENST00000527683 CTDSPL2Q05D32 466 aa8.1□□□□□ -1.11
LINC01001-202ENST00000527683 RC3H1Q5TC82 1133 aaKnown RBP8.1□□□□□ -1.11
LINC01001-202ENST00000527683 PTF1AQ7RTS3 328 aa8.1□□□□□ -1.11
LINC01001-202ENST00000527683 NLRP13Q86W25 1043 aa8.1□□□□□ -1.11
LINC01001-202ENST00000527683 BAP1Q92560 729 aa8.1□□□□□ -1.11
LINC01001-202ENST00000527683 SPON1Q9HCB6 807 aa8.1□□□□□ -1.11
LINC01001-202ENST00000527683 KIF1AQ12756 1690 aa8.1□□□□□ -1.11
LINC01001-202ENST00000527683 J3QL48 77 aa8.09□□□□□ -1.11
LINC01001-202ENST00000527683 SMPD1P17405 629 aa8.09□□□□□ -1.11
LINC01001-202ENST00000527683 LINC01559Q495D7 138 aa8.09□□□□□ -1.11
LINC01001-202ENST00000527683 MARF1Q9Y4F3 1742 aaKnown RBP8.09□□□□□ -1.11
LINC01001-202ENST00000527683 CPDO75976 1380 aa8.09□□□□□ -1.12
LINC01001-202ENST00000527683 BRWD3Q6RI45 1802 aa8.08□□□□□ -1.12
LINC01001-202ENST00000527683 USP19O94966 1318 aa8.08□□□□□ -1.12
LINC01001-202ENST00000527683 C11orf95C9JLR9 678 aaPredicted RBP8.08□□□□□ -1.12
LINC01001-202ENST00000527683 PPP2R2DQ66LE6 453 aa8.08□□□□□ -1.12
LINC01001-202ENST00000527683 CABP1Q9NZU7 370 aa8.08□□□□□ -1.12
LINC01001-202ENST00000527683 DACH1Q9UI36 760 aa8.08□□□□□ -1.12
LINC01001-202ENST00000527683 SSH2Q76I76 1423 aa8.08□□□□□ -1.12
LINC01001-202ENST00000527683 TULP4Q9NRJ4 1543 aa8.08□□□□□ -1.12
LINC01001-202ENST00000527683 LRP5O75197 1615 aa8.07□□□□□ -1.12
LINC01001-202ENST00000527683 KNDC1Q76NI1 1749 aa8.07□□□□□ -1.12
LINC01001-202ENST00000527683 FAM187AA6NFU0 413 aa8.07□□□□□ -1.12
LINC01001-202ENST00000527683 POTECB2RU33 542 aa8.07□□□□□ -1.12
LINC01001-202ENST00000527683 ST8SIA5O15466 376 aa8.07□□□□□ -1.12
LINC01001-202ENST00000527683 WNT7BP56706 349 aa8.07□□□□□ -1.12
LINC01001-202ENST00000527683 C4orf48Q5BLP8 95 aa8.07□□□□□ -1.12
LINC01001-202ENST00000527683 TSC1Q92574 1164 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms