RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 STK24Q9Y6E0 443 aa8.84□□□□□ -0.99
SOX6-208ENST00000527619 ZC3H13Q5T200 1668 aaKnown RBP8.83□□□□□ -1
SOX6-208ENST00000527619 RICTORQ6R327 1708 aa8.83□□□□□ -1
SOX6-208ENST00000527619 KIF3CO14782 793 aa8.83□□□□□ -1
SOX6-208ENST00000527619 RGS12O14924 1447 aa8.83□□□□□ -1
SOX6-208ENST00000527619 CFAP70Q5T0N1 1121 aa8.83□□□□□ -1
SOX6-208ENST00000527619 FBXO38Q6PIJ6 1188 aa8.83□□□□□ -1
SOX6-208ENST00000527619 CCDC186Q7Z3E2 898 aa8.83□□□□□ -1
SOX6-208ENST00000527619 ERO1AQ96HE7 468 aa8.83□□□□□ -1
SOX6-208ENST00000527619 SLC12A5Q9H2X9 1139 aa8.83□□□□□ -1
SOX6-208ENST00000527619 TMX1Q9H3N1 280 aa8.83□□□□□ -1
SOX6-208ENST00000527619 CXorf56Q9H5V9 222 aa8.83□□□□□ -1
SOX6-208ENST00000527619 ST7Q9NRC1 585 aa8.83□□□□□ -1
SOX6-208ENST00000527619 CCDC192P0DO97 292 aa8.83□□□□□ -1
SOX6-208ENST00000527619 LRMPQ12912 555 aa8.83□□□□□ -1
SOX6-208ENST00000527619 BMS1Q14692 1282 aaKnown RBP8.83□□□□□ -1
SOX6-208ENST00000527619 RNF20Q5VTR2 975 aa8.83□□□□□ -1
SOX6-208ENST00000527619 OTUD7AQ8TE49 926 aaPredicted RBP8.83□□□□□ -1
SOX6-208ENST00000527619 ARHGEF1Q92888 912 aaKnown RBP8.83□□□□□ -1
SOX6-208ENST00000527619 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.83□□□□□ -1
SOX6-208ENST00000527619 KIF24Q5T7B8 1368 aa8.83□□□□□ -1
SOX6-208ENST00000527619 FRMPD1Q5SYB0 1578 aa8.82□□□□□ -1
SOX6-208ENST00000527619 NEURL4Q96JN8 1562 aa8.82□□□□□ -1
SOX6-208ENST00000527619 CARNS1A5YM72 827 aa8.82□□□□□ -1
SOX6-208ENST00000527619 LIG1P18858 919 aa8.82□□□□□ -1
SOX6-208ENST00000527619 ZSCAN25Q6NSZ9 544 aa8.82□□□□□ -1
SOX6-208ENST00000527619 NOL8Q76FK4 1167 aaKnown RBP8.82□□□□□ -1
SOX6-208ENST00000527619 DRC7Q8IY82 874 aa8.82□□□□□ -1
SOX6-208ENST00000527619 JMYQ8N9B5 988 aa8.82□□□□□ -1
SOX6-208ENST00000527619 FAM200AQ8TCP9 573 aa8.82□□□□□ -1
SOX6-208ENST00000527619 CCDC97Q96F63 343 aaPredicted RBP8.82□□□□□ -1
SOX6-208ENST00000527619 FAM117AQ9C073 453 aa8.82□□□□□ -1
SOX6-208ENST00000527619 TOMM22Q9NS69 142 aa8.82□□□□□ -1
SOX6-208ENST00000527619 ZNF215Q9UL58 517 aaPredicted RBP8.82□□□□□ -1
SOX6-208ENST00000527619 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.82□□□□□ -1
SOX6-208ENST00000527619 ATL2Q8NHH9 583 aa8.82□□□□□ -1
SOX6-208ENST00000527619 CCDC171Q6TFL3 1326 aa8.82□□□□□ -1
SOX6-208ENST00000527619 CTAGE5O15320 804 aa8.81□□□□□ -1
SOX6-208ENST00000527619 ZSCAN22P10073 491 aaPredicted RBP8.81□□□□□ -1
SOX6-208ENST00000527619 SCP2P22307 547 aa8.81□□□□□ -1
SOX6-208ENST00000527619 ELF2Q15723 593 aa8.81□□□□□ -1
SOX6-208ENST00000527619 APBB1IPQ7Z5R6 666 aaPredicted RBP8.81□□□□□ -1
SOX6-208ENST00000527619 RTF1Q92541 710 aaKnown RBP8.81□□□□□ -1
SOX6-208ENST00000527619 RPS6KL1Q9Y6S9 549 aa8.81□□□□□ -1
SOX6-208ENST00000527619 COL3A1P02461 1466 aaPredicted RBP8.81□□□□□ -1
SOX6-208ENST00000527619 QRICH2Q9H0J4 1663 aa8.81□□□□□ -1
SOX6-208ENST00000527619 GTPBP6O43824 516 aaPredicted RBP8.81□□□□□ -1
SOX6-208ENST00000527619 IPO7O95373 1038 aaKnown RBP8.81□□□□□ -1
SOX6-208ENST00000527619 MYBPC2Q14324 1141 aa8.81□□□□□ -1
SOX6-208ENST00000527619 MUM1L1Q5H9M0 696 aa8.81□□□□□ -1
SOX6-208ENST00000527619 MLH3Q9UHC1 1453 aa8.8□□□□□ -1
SOX6-208ENST00000527619 HTATSF1O43719 755 aaKnown RBP8.8□□□□□ -1
SOX6-208ENST00000527619 COQ9O75208 318 aa8.8□□□□□ -1
SOX6-208ENST00000527619 VAMP4O75379 141 aa8.8□□□□□ -1
SOX6-208ENST00000527619 CCT2P78371 535 aaKnown RBP8.8□□□□□ -1
SOX6-208ENST00000527619 TEX35Q5T0J7 233 aa8.8□□□□□ -1
SOX6-208ENST00000527619 PLA2G4DQ86XP0 818 aa8.8□□□□□ -1
SOX6-208ENST00000527619 TXLNBQ8N3L3 684 aa8.8□□□□□ -1
SOX6-208ENST00000527619 API5Q9BZZ5 524 aaKnown RBP8.8□□□□□ -1
SOX6-208ENST00000527619 ZNF446Q9NWS9 450 aa8.8□□□□□ -1
SOX6-208ENST00000527619 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.8□□□□□ -1
SOX6-208ENST00000527619 ATP6V1DQ9Y5K8 247 aa8.8□□□□□ -1
SOX6-208ENST00000527619 V9GYY5 206 aaPredicted RBP8.8□□□□□ -1
SOX6-208ENST00000527619 CFAP65Q6ZU64 1925 aaKnown RBP8.8□□□□□ -1
SOX6-208ENST00000527619 ZFYVE16Q7Z3T8 1539 aa8.8□□□□□ -1
SOX6-208ENST00000527619 FIBPO43427 364 aa8.8□□□□□ -1
SOX6-208ENST00000527619 ZNF75DP51815 510 aa8.8□□□□□ -1
SOX6-208ENST00000527619 FOXD4Q12950 439 aaPredicted RBP8.8□□□□□ -1
SOX6-208ENST00000527619 SWT1Q5T5J6 900 aaKnown RBP8.8□□□□□ -1
SOX6-208ENST00000527619 C1QTNF12Q5T7M4 302 aa8.8□□□□□ -1
SOX6-208ENST00000527619 CCDC91Q7Z6B0 441 aa8.8□□□□□ -1
SOX6-208ENST00000527619 NME8Q8N427 588 aa8.8□□□□□ -1
SOX6-208ENST00000527619 ANKRD44Q8N8A2 993 aa8.8□□□□□ -1
SOX6-208ENST00000527619 NRBP1Q9UHY1 535 aa8.8□□□□□ -1
SOX6-208ENST00000527619 SLU7O95391 586 aaKnown RBP8.79□□□□□ -1
SOX6-208ENST00000527619 SRPK2P78362 688 aaKnown RBP8.79□□□□□ -1
SOX6-208ENST00000527619 C11orf91Q3C1V1 193 aa8.79□□□□□ -1
SOX6-208ENST00000527619 MSL3Q8N5Y2 521 aaKnown RBP8.79□□□□□ -1
SOX6-208ENST00000527619 MKL1Q969V6 931 aa8.79□□□□□ -1
SOX6-208ENST00000527619 FAM212AQ96EL1 285 aa8.79□□□□□ -1
SOX6-208ENST00000527619 NUCKS1Q9H1E3 243 aaKnown RBP8.79□□□□□ -1
SOX6-208ENST00000527619 PALD1Q9ULE6 856 aa8.79□□□□□ -1
SOX6-208ENST00000527619 FAM135BQ49AJ0 1406 aa8.79□□□□□ -1
SOX6-208ENST00000527619 GOLGA6CA6NDK9 693 aa8.79□□□□□ -1
SOX6-208ENST00000527619 GOLGA6BA6NDN3 693 aa8.79□□□□□ -1
SOX6-208ENST00000527619 H0YHG0 523 aa8.79□□□□□ -1
SOX6-208ENST00000527619 GOLGA6DP0CG33 693 aa8.79□□□□□ -1
SOX6-208ENST00000527619 SARNPP82979 210 aaKnown RBP8.79□□□□□ -1
SOX6-208ENST00000527619 PTPN14Q15678 1187 aa8.79□□□□□ -1
SOX6-208ENST00000527619 GTF3C6Q969F1 213 aa8.79□□□□□ -1
SOX6-208ENST00000527619 IL17RAQ96F46 866 aa8.79□□□□□ -1
SOX6-208ENST00000527619 ESYT1Q9BSJ8 1104 aa8.79□□□□□ -1
SOX6-208ENST00000527619 GOLGA6AQ9NYA3 693 aa8.79□□□□□ -1
SOX6-208ENST00000527619 ERBB3P21860 1342 aa8.79□□□□□ -1
SOX6-208ENST00000527619 IFT172Q9UG01 1749 aa8.79□□□□□ -1
SOX6-208ENST00000527619 ATP10DQ9P241 1426 aa8.79□□□□□ -1
SOX6-208ENST00000527619 F13A1P00488 732 aa8.78□□□□□ -1
SOX6-208ENST00000527619 H2AFXP16104 143 aaPredicted RBP8.78□□□□□ -1
SOX6-208ENST00000527619 PPP2R5AQ15172 486 aa8.78□□□□□ -1
SOX6-208ENST00000527619 DDX46Q7L014 1031 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms