RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 ANKRD36CQ5JPF3 1778 aa21.42■■□□□ 1.02
SMCO4-204ENST00000527149 MAP3K15Q6ZN16 1313 aa21.42■■□□□ 1.02
SMCO4-204ENST00000527149 CT47B1P0C2W7 299 aaPredicted RBP21.41■■□□□ 1.02
SMCO4-204ENST00000527149 COPS6Q7L5N1 327 aa21.41■■□□□ 1.02
SMCO4-204ENST00000527149 PHAXQ9H814 394 aaKnown RBP21.41■■□□□ 1.02
SMCO4-204ENST00000527149 SPON1Q9HCB6 807 aa21.41■■□□□ 1.02
SMCO4-204ENST00000527149 NRXN2Q9P2S2 1712 aa21.41■■□□□ 1.02
SMCO4-204ENST00000527149 ATP10DQ9P241 1426 aa21.4■■□□□ 1.02
SMCO4-204ENST00000527149 NPM2Q86SE8 214 aaKnown RBP21.4■■□□□ 1.02
SMCO4-204ENST00000527149 AFDNP55196 1824 aaKnown RBP21.39■■□□□ 1.02
SMCO4-204ENST00000527149 ERVV-1B6SEH8 477 aa21.39■■□□□ 1.01
SMCO4-204ENST00000527149 DDR1Q08345 913 aa21.39■■□□□ 1.01
SMCO4-204ENST00000527149 HLFQ16534 295 aa21.39■■□□□ 1.01
SMCO4-204ENST00000527149 G2E3Q7L622 706 aa21.39■■□□□ 1.01
SMCO4-204ENST00000527149 NLGN1Q8N2Q7 840 aa21.39■■□□□ 1.01
SMCO4-204ENST00000527149 ZNF428Q96B54 188 aa21.39■■□□□ 1.01
SMCO4-204ENST00000527149 STK31Q9BXU1 1019 aa21.39■■□□□ 1.01
SMCO4-204ENST00000527149 TM4SF1P30408 202 aa21.38■■□□□ 1.01
SMCO4-204ENST00000527149 CLEC4GQ6UXB4 293 aa21.38■■□□□ 1.01
SMCO4-204ENST00000527149 KIF6Q6ZMV9 814 aa21.38■■□□□ 1.01
SMCO4-204ENST00000527149 SLC4A2P04920 1241 aa21.37■■□□□ 1.01
SMCO4-204ENST00000527149 MMP10P09238 476 aa21.37■■□□□ 1.01
SMCO4-204ENST00000527149 AIMP1Q12904 312 aaKnown RBP21.37■■□□□ 1.01
SMCO4-204ENST00000527149 NFIXQ14938 502 aa21.37■■□□□ 1.01
SMCO4-204ENST00000527149 TBC1D9BQ66K14 1250 aa21.37■■□□□ 1.01
SMCO4-204ENST00000527149 SSH1Q8WYL5 1049 aa21.37■■□□□ 1.01
SMCO4-204ENST00000527149 YTHDC1Q96MU7 727 aaKnown RBP21.37■■□□□ 1.01
SMCO4-204ENST00000527149 ZBTB3Q9H5J0 574 aa21.37■■□□□ 1.01
SMCO4-204ENST00000527149 ARXQ96QS3 562 aa21.36■■□□□ 1.01
SMCO4-204ENST00000527149 ADCY9O60503 1353 aa21.36■■□□□ 1.01
SMCO4-204ENST00000527149 KIF13BQ9NQT8 1826 aa21.35■■□□□ 1.01
SMCO4-204ENST00000527149 POLRMTO00411 1230 aaKnown RBP21.35■■□□□ 1.01
SMCO4-204ENST00000527149 FLIIQ13045 1269 aa21.35■■□□□ 1.01
SMCO4-204ENST00000527149 PLBD2Q8NHP8 589 aa21.35■■□□□ 1.01
SMCO4-204ENST00000527149 ZNF652Q9Y2D9 606 aa21.35■■□□□ 1.01
SMCO4-204ENST00000527149 ALDH1L2Q3SY69 923 aa21.34■■□□□ 1.01
SMCO4-204ENST00000527149 GIGYF2Q6Y7W6 1299 aaKnown RBP21.34■■□□□ 1.01
SMCO4-204ENST00000527149 MRPL50Q8N5N7 158 aaKnown RBP21.34■■□□□ 1.01
SMCO4-204ENST00000527149 C10orf71Q711Q0 1435 aa21.33■■□□□ 1.01
SMCO4-204ENST00000527149 POLD1P28340 1107 aa21.33■■□□□ 1.01
SMCO4-204ENST00000527149 RARSP54136 660 aaKnown RBP21.33■■□□□ 1.01
SMCO4-204ENST00000527149 ANKRD13DQ6ZTN6 518 aa21.33■■□□□ 1.01
SMCO4-204ENST00000527149 CARMIL3Q8ND23 1372 aa21.33■■□□□ 1
SMCO4-204ENST00000527149 UBN2Q6ZU65 1347 aa21.32■■□□□ 1
SMCO4-204ENST00000527149 BCL2L13Q9BXK5 485 aa21.32■■□□□ 1
SMCO4-204ENST00000527149 KIAA1551Q9HCM1 1747 aa21.32■■□□□ 1
SMCO4-204ENST00000527149 BRPF1P55201 1214 aaPredicted RBP21.31■■□□□ 1
SMCO4-204ENST00000527149 ZNF34Q8IZ26 560 aa21.31■■□□□ 1
SMCO4-204ENST00000527149 BICDL1Q6ZP65 573 aa21.3■■□□□ 1
SMCO4-204ENST00000527149 GOLGB1Q14789 3259 aaKnown RBP21.3■■□□□ 1
SMCO4-204ENST00000527149 ANKRD31Q8N7Z5 1873 aa21.3■■□□□ 1
SMCO4-204ENST00000527149 IBTKQ9P2D0 1353 aaPredicted RBP21.29■■□□□ 1
SMCO4-204ENST00000527149 PI4KAP2A4QPH2 592 aa21.29■■□□□ 1
SMCO4-204ENST00000527149 TCIRG1Q13488 830 aa21.29■■□□□ 1
SMCO4-204ENST00000527149 KSR2Q6VAB6 950 aa21.29■■□□□ 1
SMCO4-204ENST00000527149 PI4KAP1Q8N8J0 262 aa21.29■■□□□ 1
SMCO4-204ENST00000527149 SMC4Q9NTJ3 1288 aa21.29■■□□□ 1
SMCO4-204ENST00000527149 NIP7Q9Y221 180 aaKnown RBP eCLIP21.29■■□□□ 1
SMCO4-204ENST00000527149 N4BP2Q86UW6 1770 aaPredicted RBP21.28■■□□□ 1
SMCO4-204ENST00000527149 DDX58O95786 925 aaKnown RBP21.28■■□□□ 1
SMCO4-204ENST00000527149 GPTP24298 496 aa21.28■■□□□ 1
SMCO4-204ENST00000527149 FKBP5Q13451 457 aaPredicted RBP21.28■■□□□ 1
SMCO4-204ENST00000527149 SETDB2Q96T68 719 aa21.28■■□□□ 1
SMCO4-204ENST00000527149 ISCA1Q9BUE6 129 aa21.28■■□□□ 1
SMCO4-204ENST00000527149 PARP3Q9Y6F1 533 aa21.28■■□□□ 1
SMCO4-204ENST00000527149 SERPINB2P05120 415 aa21.27■■□□□ 1
SMCO4-204ENST00000527149 HSP90AB3PQ58FF7 597 aa21.27■■□□□ 1
SMCO4-204ENST00000527149 RIC3Q7Z5B4 369 aa21.27■■□□□ 1
SMCO4-204ENST00000527149 MAP3K2Q9Y2U5 619 aa21.27■■□□□ 1
SMCO4-204ENST00000527149 METTL22Q9BUU2 404 aaPredicted RBP21.26■□□□□ 0.99
SMCO4-204ENST00000527149 TNRC6CQ9HCJ0 1690 aaKnown RBP21.25■□□□□ 0.99
SMCO4-204ENST00000527149 NTSR2O95665 410 aa21.25■□□□□ 0.99
SMCO4-204ENST00000527149 TRIM28Q13263 835 aaKnown RBP21.25■□□□□ 0.99
SMCO4-204ENST00000527149 PRR5LQ6MZQ0 368 aa21.25■□□□□ 0.99
SMCO4-204ENST00000527149 NLRP10Q86W26 655 aa21.25■□□□□ 0.99
SMCO4-204ENST00000527149 PTPRCP08575 1304 aa21.25■□□□□ 0.99
SMCO4-204ENST00000527149 ABCC12Q96J65 1359 aa21.24■□□□□ 0.99
SMCO4-204ENST00000527149 COL11A2P13942 1736 aaPredicted RBP21.24■□□□□ 0.99
SMCO4-204ENST00000527149 F6X3S4 739 aa21.24■□□□□ 0.99
SMCO4-204ENST00000527149 ATP5J2-PTCD1G3V325 749 aa21.24■□□□□ 0.99
SMCO4-204ENST00000527149 IGKV5-2P06315 115 aa21.24■□□□□ 0.99
SMCO4-204ENST00000527149 PARP10Q53GL7 1025 aa21.24■□□□□ 0.99
SMCO4-204ENST00000527149 SUSD4Q5VX71 490 aa21.24■□□□□ 0.99
SMCO4-204ENST00000527149 DNAAF4Q8WXU2 420 aa21.24■□□□□ 0.99
SMCO4-204ENST00000527149 PXDNLA1KZ92 1463 aa21.24■□□□□ 0.99
SMCO4-204ENST00000527149 BCAR3O75815 825 aa21.23■□□□□ 0.99
SMCO4-204ENST00000527149 MYD88Q99836 296 aa21.23■□□□□ 0.99
SMCO4-204ENST00000527149 FHDC1Q9C0D6 1143 aaPredicted RBP21.23■□□□□ 0.99
SMCO4-204ENST00000527149 LAMB2P55268 1798 aa21.23■□□□□ 0.99
SMCO4-204ENST00000527149 RIC1Q4ADV7 1423 aa21.22■□□□□ 0.99
SMCO4-204ENST00000527149 NBPF5PQ86XG9 351 aaPredicted RBP21.22■□□□□ 0.99
SMCO4-204ENST00000527149 CNBD1Q8NA66 436 aa21.22■□□□□ 0.99
SMCO4-204ENST00000527149 PPP1R1BQ9UD71 204 aaPredicted RBP21.22■□□□□ 0.99
SMCO4-204ENST00000527149 DLEC1Q9Y238 1755 aa21.22■□□□□ 0.99
SMCO4-204ENST00000527149 KIF16BQ96L93 1317 aa21.22■□□□□ 0.99
SMCO4-204ENST00000527149 DDX60Q8IY21 1712 aaKnown RBP21.21■□□□□ 0.99
SMCO4-204ENST00000527149 CD2APQ9Y5K6 639 aa21.21■□□□□ 0.99
SMCO4-204ENST00000527149 BRCA1P38398 1863 aaKnown RBP21.21■□□□□ 0.99
SMCO4-204ENST00000527149 NOB1Q9ULX3 412 aaKnown RBP21.2■□□□□ 0.98
SMCO4-204ENST00000527149 RNF123Q5XPI4 1314 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms