RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 IL17REQ8NFR9 667 aa17.58■□□□□ 0.4
CLNS1A-207ENST00000527133 MASTLQ96GX5 879 aa17.58■□□□□ 0.4
CLNS1A-207ENST00000527133 PASKQ96RG2 1323 aa17.57■□□□□ 0.4
CLNS1A-207ENST00000527133 GNAT3A8MTJ3 354 aa17.57■□□□□ 0.4
CLNS1A-207ENST00000527133 TAF1DQ9H5J8 278 aaPredicted RBP17.57■□□□□ 0.4
CLNS1A-207ENST00000527133 DZIP3Q86Y13 1208 aaKnown RBP17.56■□□□□ 0.4
CLNS1A-207ENST00000527133 AIDAQ96BJ3 306 aa17.56■□□□□ 0.4
CLNS1A-207ENST00000527133 L3MBTL3Q96JM7 780 aaPredicted RBP17.56■□□□□ 0.4
CLNS1A-207ENST00000527133 FMNL2Q96PY5 1086 aa17.56■□□□□ 0.4
CLNS1A-207ENST00000527133 PRDM10Q9NQV6 1147 aa17.56■□□□□ 0.4
CLNS1A-207ENST00000527133 U2SURPO15042 1029 aaKnown RBP17.55■□□□□ 0.4
CLNS1A-207ENST00000527133 VEGFBP49765 207 aa17.55■□□□□ 0.4
CLNS1A-207ENST00000527133 EAPPQ56P03 285 aaPredicted RBP17.55■□□□□ 0.4
CLNS1A-207ENST00000527133 CC2D1BQ5T0F9 858 aaKnown RBP17.55■□□□□ 0.4
CLNS1A-207ENST00000527133 GAS2L2Q8NHY3 880 aa17.55■□□□□ 0.4
CLNS1A-207ENST00000527133 ARFGEF2Q9Y6D5 1785 aa17.55■□□□□ 0.4
CLNS1A-207ENST00000527133 SIPA1L3O60292 1781 aaPredicted RBP17.54■□□□□ 0.4
CLNS1A-207ENST00000527133 TMEM88BA6NKF7 163 aa17.54■□□□□ 0.4
CLNS1A-207ENST00000527133 PIP4K2AP48426 406 aaPredicted RBP17.54■□□□□ 0.4
CLNS1A-207ENST00000527133 CTCFP49711 727 aaPredicted RBP17.54■□□□□ 0.4
CLNS1A-207ENST00000527133 CCDC93Q567U6 631 aa17.54■□□□□ 0.4
CLNS1A-207ENST00000527133 NBPF5PQ86XG9 351 aaPredicted RBP17.54■□□□□ 0.4
CLNS1A-207ENST00000527133 C7orf43Q8WVR3 580 aa17.54■□□□□ 0.4
CLNS1A-207ENST00000527133 SCN4AP35499 1836 aa17.54■□□□□ 0.4
CLNS1A-207ENST00000527133 BCORQ6W2J9 1755 aa17.53■□□□□ 0.4
CLNS1A-207ENST00000527133 ZNF541Q9H0D2 1346 aa17.53■□□□□ 0.4
CLNS1A-207ENST00000527133 KCNQ3O43525 872 aa17.53■□□□□ 0.4
CLNS1A-207ENST00000527133 ZNF277Q9NRM2 450 aaPredicted RBP17.53■□□□□ 0.4
CLNS1A-207ENST00000527133 ITGBL1O95965 494 aaPredicted RBP17.52■□□□□ 0.4
CLNS1A-207ENST00000527133 FKBP4Q02790 459 aaKnown RBP eCLIP17.52■□□□□ 0.4
CLNS1A-207ENST00000527133 CLEC11AQ9Y240 323 aa17.52■□□□□ 0.4
CLNS1A-207ENST00000527133 KIF7Q2M1P5 1343 aa17.51■□□□□ 0.39
CLNS1A-207ENST00000527133 COL3A1P02461 1466 aaPredicted RBP17.51■□□□□ 0.39
CLNS1A-207ENST00000527133 BTBD11A6QL63 1104 aa17.51■□□□□ 0.39
CLNS1A-207ENST00000527133 NPR1P16066 1061 aa17.51■□□□□ 0.39
CLNS1A-207ENST00000527133 OLFM4Q6UX06 510 aa17.51■□□□□ 0.39
CLNS1A-207ENST00000527133 HACL1Q9UJ83 578 aa17.51■□□□□ 0.39
CLNS1A-207ENST00000527133 EPHX2P34913 555 aa17.5■□□□□ 0.39
CLNS1A-207ENST00000527133 LBX1P52954 281 aa17.5■□□□□ 0.39
CLNS1A-207ENST00000527133 CNGB1Q14028 1251 aaPredicted RBP17.5■□□□□ 0.39
CLNS1A-207ENST00000527133 WBP1LQ9NX94 342 aa17.5■□□□□ 0.39
CLNS1A-207ENST00000527133 ZNF652Q9Y2D9 606 aa17.5■□□□□ 0.39
CLNS1A-207ENST00000527133 USP16Q9Y5T5 823 aa17.5■□□□□ 0.39
CLNS1A-207ENST00000527133 CEMIPQ8WUJ3 1361 aa17.5■□□□□ 0.39
CLNS1A-207ENST00000527133 PER1O15534 1290 aaPredicted RBP17.49■□□□□ 0.39
CLNS1A-207ENST00000527133 CLEC4GQ6UXB4 293 aa17.49■□□□□ 0.39
CLNS1A-207ENST00000527133 RNF123Q5XPI4 1314 aa17.48■□□□□ 0.39
CLNS1A-207ENST00000527133 PRAMEF22A3QJZ6 481 aa17.48■□□□□ 0.39
CLNS1A-207ENST00000527133 FAM177BA6PVY3 158 aa17.48■□□□□ 0.39
CLNS1A-207ENST00000527133 KLRG2A4D1S0 409 aaPredicted RBP17.47■□□□□ 0.39
CLNS1A-207ENST00000527133 MAP1SQ66K74 1059 aaPredicted RBP17.47■□□□□ 0.39
CLNS1A-207ENST00000527133 TPTE2Q6XPS3 522 aa17.47■□□□□ 0.39
CLNS1A-207ENST00000527133 RTKN2Q8IZC4 609 aa17.47■□□□□ 0.39
CLNS1A-207ENST00000527133 CNTROBQ8N137 903 aa17.47■□□□□ 0.39
CLNS1A-207ENST00000527133 NIP7Q9Y221 180 aaKnown RBP eCLIP17.47■□□□□ 0.39
CLNS1A-207ENST00000527133 ADAMTSL1Q8N6G6 1762 aa17.47■□□□□ 0.39
CLNS1A-207ENST00000527133 RASSF10A6NK89 507 aa17.46■□□□□ 0.39
CLNS1A-207ENST00000527133 IARSP41252 1262 aaKnown RBP17.46■□□□□ 0.39
CLNS1A-207ENST00000527133 DEFB115Q30KQ5 88 aa17.46■□□□□ 0.39
CLNS1A-207ENST00000527133 PNMA8AQ86V59 439 aaPredicted RBP17.46■□□□□ 0.39
CLNS1A-207ENST00000527133 PHACTR3Q96KR7 559 aa17.46■□□□□ 0.39
CLNS1A-207ENST00000527133 HSPA8P11142 646 aaKnown RBP17.45■□□□□ 0.38
CLNS1A-207ENST00000527133 PRKAR2BP31323 418 aa17.45■□□□□ 0.38
CLNS1A-207ENST00000527133 SYNE4Q8N205 404 aa17.45■□□□□ 0.38
CLNS1A-207ENST00000527133 ABT1Q9ULW3 272 aaKnown RBP17.45■□□□□ 0.38
CLNS1A-207ENST00000527133 FZD9O00144 591 aa17.44■□□□□ 0.38
CLNS1A-207ENST00000527133 SNRPA1P09661 255 aaKnown RBP17.44■□□□□ 0.38
CLNS1A-207ENST00000527133 GPC2Q8N158 579 aa17.44■□□□□ 0.38
CLNS1A-207ENST00000527133 WDR33Q9C0J8 1336 aaKnown RBP17.44■□□□□ 0.38
CLNS1A-207ENST00000527133 NBPF26B4DH59 902 aa17.43■□□□□ 0.38
CLNS1A-207ENST00000527133 ALDH1B1P30837 517 aa17.43■□□□□ 0.38
CLNS1A-207ENST00000527133 NBPF10Q6P3W6 841 aaKnown RBP17.43■□□□□ 0.38
CLNS1A-207ENST00000527133 NBPF15Q8N660 670 aa17.43■□□□□ 0.38
CLNS1A-207ENST00000527133 ABHD8Q96I13 439 aa17.43■□□□□ 0.38
CLNS1A-207ENST00000527133 GTF2E1P29083 439 aaPredicted RBP17.42■□□□□ 0.38
CLNS1A-207ENST00000527133 MAP2K1Q02750 393 aaPredicted RBP17.42■□□□□ 0.38
CLNS1A-207ENST00000527133 MCM10Q7L590 875 aa17.42■□□□□ 0.38
CLNS1A-207ENST00000527133 JDP2Q8WYK2 163 aa17.42■□□□□ 0.38
CLNS1A-207ENST00000527133 RSPH6AQ9H0K4 717 aa17.42■□□□□ 0.38
CLNS1A-207ENST00000527133 GJA3Q9Y6H8 435 aa17.42■□□□□ 0.38
CLNS1A-207ENST00000527133 HLFQ16534 295 aa17.41■□□□□ 0.38
CLNS1A-207ENST00000527133 RTF1Q92541 710 aaKnown RBP17.41■□□□□ 0.38
CLNS1A-207ENST00000527133 DDX21Q9NR30 783 aaKnown RBP eCLIP17.41■□□□□ 0.38
CLNS1A-207ENST00000527133 RGL2O15211 777 aa17.4■□□□□ 0.38
CLNS1A-207ENST00000527133 FAM161AQ3B820 660 aa17.4■□□□□ 0.38
CLNS1A-207ENST00000527133 PAXIP1Q6ZW49 1069 aaPredicted RBP17.4■□□□□ 0.38
CLNS1A-207ENST00000527133 PSMD1Q99460 953 aa17.4■□□□□ 0.38
CLNS1A-207ENST00000527133 ABCC12Q96J65 1359 aa17.4■□□□□ 0.38
CLNS1A-207ENST00000527133 NPC1L1Q9UHC9 1359 aa17.4■□□□□ 0.38
CLNS1A-207ENST00000527133 SNED1Q8TER0 1413 aa17.39■□□□□ 0.38
CLNS1A-207ENST00000527133 LMOD1P29536 600 aaPredicted RBP17.39■□□□□ 0.37
CLNS1A-207ENST00000527133 EIF6P56537 245 aaKnown RBP17.39■□□□□ 0.37
CLNS1A-207ENST00000527133 FMR1Q06787 632 aaKnown RBP eCLIP17.39■□□□□ 0.37
CLNS1A-207ENST00000527133 COL4A5P29400 1685 aa17.39■□□□□ 0.37
CLNS1A-207ENST00000527133 GRM1Q13255 1194 aa17.38■□□□□ 0.37
CLNS1A-207ENST00000527133 DCTN1Q14203 1278 aa17.38■□□□□ 0.37
CLNS1A-207ENST00000527133 CRY2Q49AN0 593 aa17.38■□□□□ 0.37
CLNS1A-207ENST00000527133 NUTM1Q86Y26 1132 aa17.38■□□□□ 0.37
CLNS1A-207ENST00000527133 CCER1Q8TC90 406 aaPredicted RBP17.38■□□□□ 0.37
CLNS1A-207ENST00000527133 CFAP53Q96M91 514 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms