RNA–Protein interactions for RNA: ENST00000527013.5

CHEK1-209, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-209ENST00000527013 CNKSR1Q969H4 720 aa21.54■■□□□ 1.04
CHEK1-209ENST00000527013 ARFGEF2Q9Y6D5 1785 aa21.53■■□□□ 1.04
CHEK1-209ENST00000527013 SNRPA1P09661 255 aaKnown RBP21.53■■□□□ 1.04
CHEK1-209ENST00000527013 HTATSF1O43719 755 aaKnown RBP21.52■■□□□ 1.04
CHEK1-209ENST00000527013 PPP2R1AP30153 589 aa21.52■■□□□ 1.04
CHEK1-209ENST00000527013 ST5P78524 1137 aa21.52■■□□□ 1.04
CHEK1-209ENST00000527013 ERFEQ4G0M1 354 aa21.52■■□□□ 1.04
CHEK1-209ENST00000527013 RTF1Q92541 710 aaKnown RBP21.52■■□□□ 1.04
CHEK1-209ENST00000527013 SLX4Q8IY92 1834 aa21.52■■□□□ 1.04
CHEK1-209ENST00000527013 U2AF1L5P0DN76 240 aaPredicted RBP21.51■■□□□ 1.03
CHEK1-209ENST00000527013 U2AF1Q01081 240 aaKnown RBP eCLIP21.51■■□□□ 1.03
CHEK1-209ENST00000527013 SOGA3Q5TF21 947 aa21.51■■□□□ 1.03
CHEK1-209ENST00000527013 MASTLQ96GX5 879 aa21.51■■□□□ 1.03
CHEK1-209ENST00000527013 TAOK3Q9H2K8 898 aa21.51■■□□□ 1.03
CHEK1-209ENST00000527013 PRAMEF22A3QJZ6 481 aa21.5■■□□□ 1.03
CHEK1-209ENST00000527013 PRPF40BQ6NWY9 871 aaKnown RBP21.5■■□□□ 1.03
CHEK1-209ENST00000527013 MCM10Q7L590 875 aa21.5■■□□□ 1.03
CHEK1-209ENST00000527013 KLRG2A4D1S0 409 aaPredicted RBP21.49■■□□□ 1.03
CHEK1-209ENST00000527013 NPHP1O15259 732 aa21.49■■□□□ 1.03
CHEK1-209ENST00000527013 ZNF219Q9P2Y4 722 aaPredicted RBP21.49■■□□□ 1.03
CHEK1-209ENST00000527013 ZNF652Q9Y2D9 606 aa21.49■■□□□ 1.03
CHEK1-209ENST00000527013 PIP4K2AP48426 406 aaPredicted RBP21.48■■□□□ 1.03
CHEK1-209ENST00000527013 C7orf43Q8WVR3 580 aa21.48■■□□□ 1.03
CHEK1-209ENST00000527013 NBPF26B4DH59 902 aa21.47■■□□□ 1.03
CHEK1-209ENST00000527013 NBPF10Q6P3W6 841 aaKnown RBP21.47■■□□□ 1.03
CHEK1-209ENST00000527013 NBPF5PQ86XG9 351 aaPredicted RBP21.47■■□□□ 1.03
CHEK1-209ENST00000527013 NBPF15Q8N660 670 aa21.47■■□□□ 1.03
CHEK1-209ENST00000527013 CACNA1SQ13698 1873 aa21.47■■□□□ 1.03
CHEK1-209ENST00000527013 PCNTO95613 3336 aa21.46■■□□□ 1.03
CHEK1-209ENST00000527013 NPR1P16066 1061 aa21.45■■□□□ 1.02
CHEK1-209ENST00000527013 DCTN1Q14203 1278 aa21.45■■□□□ 1.02
CHEK1-209ENST00000527013 TAF7Q15545 349 aaPredicted RBP21.45■■□□□ 1.02
CHEK1-209ENST00000527013 TPTE2Q6XPS3 522 aa21.45■■□□□ 1.02
CHEK1-209ENST00000527013 COL13A1Q5TAT6 717 aaPredicted RBP21.44■■□□□ 1.02
CHEK1-209ENST00000527013 DDNO94850 711 aaPredicted RBP21.43■■□□□ 1.02
CHEK1-209ENST00000527013 NIP7Q9Y221 180 aaKnown RBP eCLIP21.43■■□□□ 1.02
CHEK1-209ENST00000527013 LAMB4A4D0S4 1761 aa21.42■■□□□ 1.02
CHEK1-209ENST00000527013 CCDC93Q567U6 631 aa21.42■■□□□ 1.02
CHEK1-209ENST00000527013 CHADLQ6NUI6 762 aa21.42■■□□□ 1.02
CHEK1-209ENST00000527013 L3MBTL3Q96JM7 780 aaPredicted RBP21.42■■□□□ 1.02
CHEK1-209ENST00000527013 SCN4AP35499 1836 aa21.4■■□□□ 1.02
CHEK1-209ENST00000527013 IQCA1LA6NCM1 817 aa21.39■■□□□ 1.01
CHEK1-209ENST00000527013 FKBP4Q02790 459 aaKnown RBP eCLIP21.39■■□□□ 1.01
CHEK1-209ENST00000527013 HLFQ16534 295 aa21.39■■□□□ 1.01
CHEK1-209ENST00000527013 PNISRQ8TF01 805 aaKnown RBP21.39■■□□□ 1.01
CHEK1-209ENST00000527013 CREBZFQ9NS37 354 aa21.39■■□□□ 1.01
CHEK1-209ENST00000527013 KDM3BQ7LBC6 1761 aa21.38■■□□□ 1.01
CHEK1-209ENST00000527013 DLG5Q8TDM6 1919 aa21.38■■□□□ 1.01
CHEK1-209ENST00000527013 ERVV-1B6SEH8 477 aa21.38■■□□□ 1.01
CHEK1-209ENST00000527013 RTKN2Q8IZC4 609 aa21.38■■□□□ 1.01
CHEK1-209ENST00000527013 POTEIP0CG38 1075 aa21.37■■□□□ 1.01
CHEK1-209ENST00000527013 POTEJP0CG39 1038 aa21.37■■□□□ 1.01
CHEK1-209ENST00000527013 ALDH1B1P30837 517 aa21.37■■□□□ 1.01
CHEK1-209ENST00000527013 CRY2Q49AN0 593 aa21.37■■□□□ 1.01
CHEK1-209ENST00000527013 PLEKHF1Q96S99 279 aa21.37■■□□□ 1.01
CHEK1-209ENST00000527013 MIS18AQ9NYP9 233 aa21.37■■□□□ 1.01
CHEK1-209ENST00000527013 HSPA1AP0DMV8 641 aaKnown RBP21.36■■□□□ 1.01
CHEK1-209ENST00000527013 HSPA1BP0DMV9 641 aaKnown RBP21.36■■□□□ 1.01
CHEK1-209ENST00000527013 SNED1Q8TER0 1413 aa21.36■■□□□ 1.01
CHEK1-209ENST00000527013 NEFMP07197 916 aa21.35■■□□□ 1.01
CHEK1-209ENST00000527013 LDHDQ86WU2 507 aa21.35■■□□□ 1.01
CHEK1-209ENST00000527013 TAF1DQ9H5J8 278 aaPredicted RBP21.35■■□□□ 1.01
CHEK1-209ENST00000527013 RIC1Q4ADV7 1423 aa21.35■■□□□ 1.01
CHEK1-209ENST00000527013 NUP98P52948 1817 aa21.34■■□□□ 1.01
CHEK1-209ENST00000527013 PASKQ96RG2 1323 aa21.34■■□□□ 1.01
CHEK1-209ENST00000527013 EIF4A1P60842 406 aaKnown RBP21.34■■□□□ 1.01
CHEK1-209ENST00000527013 NYXQ9GZU5 481 aa21.34■■□□□ 1.01
CHEK1-209ENST00000527013 ZNF277Q9NRM2 450 aaPredicted RBP21.34■■□□□ 1.01
CHEK1-209ENST00000527013 MAP3K15Q6ZN16 1313 aa21.33■■□□□ 1.01
CHEK1-209ENST00000527013 FAM177BA6PVY3 158 aa21.33■■□□□ 1.01
CHEK1-209ENST00000527013 FZD9O00144 591 aa21.33■■□□□ 1.01
CHEK1-209ENST00000527013 GTF2E1P29083 439 aaPredicted RBP21.33■■□□□ 1.01
CHEK1-209ENST00000527013 OLFM4Q6UX06 510 aa21.33■■□□□ 1.01
CHEK1-209ENST00000527013 IBTKQ9P2D0 1353 aaPredicted RBP21.33■■□□□ 1
CHEK1-209ENST00000527013 ZNF541Q9H0D2 1346 aa21.32■■□□□ 1
CHEK1-209ENST00000527013 NFE2L2Q16236 605 aa21.32■■□□□ 1
CHEK1-209ENST00000527013 TNS4Q8IZW8 715 aa21.32■■□□□ 1
CHEK1-209ENST00000527013 PSMD1Q99460 953 aa21.32■■□□□ 1
CHEK1-209ENST00000527013 ABCC12Q96J65 1359 aa21.32■■□□□ 1
CHEK1-209ENST00000527013 ADAMTSL1Q8N6G6 1762 aa21.31■■□□□ 1
CHEK1-209ENST00000527013 IARSP41252 1262 aaKnown RBP21.31■■□□□ 1
CHEK1-209ENST00000527013 CC2D2BQ6DHV5 1058 aa21.31■■□□□ 1
CHEK1-209ENST00000527013 ITGBL1O95965 494 aaPredicted RBP21.3■■□□□ 1
CHEK1-209ENST00000527013 HOXA10P31260 410 aaPredicted RBP21.3■■□□□ 1
CHEK1-209ENST00000527013 SYNE4Q8N205 404 aa21.3■■□□□ 1
CHEK1-209ENST00000527013 PNNQ9H307 717 aaKnown RBP21.3■■□□□ 1
CHEK1-209ENST00000527013 HACL1Q9UJ83 578 aa21.3■■□□□ 1
CHEK1-209ENST00000527013 ERBB4Q15303 1308 aa21.29■■□□□ 1
CHEK1-209ENST00000527013 CNTNAP1P78357 1384 aa21.29■■□□□ 1
CHEK1-209ENST00000527013 GRIPAP1Q4V328 841 aa21.29■■□□□ 1
CHEK1-209ENST00000527013 TTLL7Q6ZT98 887 aa21.29■■□□□ 1
CHEK1-209ENST00000527013 NUTM1Q86Y26 1132 aa21.29■■□□□ 1
CHEK1-209ENST00000527013 NGEFQ8N5V2 710 aa21.29■■□□□ 1
CHEK1-209ENST00000527013 RRP7AQ9Y3A4 280 aaKnown RBP21.29■■□□□ 1
CHEK1-209ENST00000527013 UBN2Q6ZU65 1347 aa21.29■■□□□ 1
CHEK1-209ENST00000527013 KIF6Q6ZMV9 814 aa21.28■■□□□ 1
CHEK1-209ENST00000527013 PNMA8AQ86V59 439 aaPredicted RBP21.28■■□□□ 1
CHEK1-209ENST00000527013 ZNF34Q8IZ26 560 aa21.28■■□□□ 1
CHEK1-209ENST00000527013 GPC2Q8N158 579 aa21.28■■□□□ 1
CHEK1-209ENST00000527013 MKRN1Q9UHC7 482 aaKnown RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms