RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 STYK1Q6J9G0 422 aa25.07■■□□□ 1.6
CAPN1-206ENST00000526966 LAMB4A4D0S4 1761 aa25.07■■□□□ 1.6
CAPN1-206ENST00000526966 PRAMEF22A3QJZ6 481 aa25.06■■□□□ 1.6
CAPN1-206ENST00000526966 PPP2R1AP30153 589 aa25.06■■□□□ 1.6
CAPN1-206ENST00000526966 ST5P78524 1137 aa25.06■■□□□ 1.6
CAPN1-206ENST00000526966 CNKSR1Q969H4 720 aa25.06■■□□□ 1.6
CAPN1-206ENST00000526966 ZNF219Q9P2Y4 722 aaPredicted RBP25.06■■□□□ 1.6
CAPN1-206ENST00000526966 SNRPA1P09661 255 aaKnown RBP25.05■■□□□ 1.6
CAPN1-206ENST00000526966 U2AF1L5P0DN76 240 aaPredicted RBP25.05■■□□□ 1.6
CAPN1-206ENST00000526966 PIP4K2AP48426 406 aaPredicted RBP25.05■■□□□ 1.6
CAPN1-206ENST00000526966 U2AF1Q01081 240 aaKnown RBP eCLIP25.05■■□□□ 1.6
CAPN1-206ENST00000526966 DPY19L2Q6NUT2 758 aa25.05■■□□□ 1.6
CAPN1-206ENST00000526966 CLEC4GQ6UXB4 293 aa25.05■■□□□ 1.6
CAPN1-206ENST00000526966 MCM10Q7L590 875 aa25.05■■□□□ 1.6
CAPN1-206ENST00000526966 TAOK3Q9H2K8 898 aa25.05■■□□□ 1.6
CAPN1-206ENST00000526966 DLG5Q8TDM6 1919 aa25.04■■□□□ 1.6
CAPN1-206ENST00000526966 ERFEQ4G0M1 354 aa25.04■■□□□ 1.6
CAPN1-206ENST00000526966 PRPF40BQ6NWY9 871 aaKnown RBP25.04■■□□□ 1.6
CAPN1-206ENST00000526966 RTF1Q92541 710 aaKnown RBP25.04■■□□□ 1.6
CAPN1-206ENST00000526966 RGL2O15211 777 aa25.03■■□□□ 1.6
CAPN1-206ENST00000526966 NPHP1O15259 732 aa25.03■■□□□ 1.6
CAPN1-206ENST00000526966 MASTLQ96GX5 879 aa25.03■■□□□ 1.6
CAPN1-206ENST00000526966 HTATSF1O43719 755 aaKnown RBP25.02■■□□□ 1.6
CAPN1-206ENST00000526966 SOGA3Q5TF21 947 aa25.02■■□□□ 1.6
CAPN1-206ENST00000526966 KDM3BQ7LBC6 1761 aa25.01■■□□□ 1.59
CAPN1-206ENST00000526966 ZNF652Q9Y2D9 606 aa25.01■■□□□ 1.59
CAPN1-206ENST00000526966 NBPF26B4DH59 902 aa25■■□□□ 1.59
CAPN1-206ENST00000526966 DCTN1Q14203 1278 aa25■■□□□ 1.59
CAPN1-206ENST00000526966 NBPF10Q6P3W6 841 aaKnown RBP25■■□□□ 1.59
CAPN1-206ENST00000526966 NBPF5PQ86XG9 351 aaPredicted RBP25■■□□□ 1.59
CAPN1-206ENST00000526966 NBPF15Q8N660 670 aa25■■□□□ 1.59
CAPN1-206ENST00000526966 KLRG2A4D1S0 409 aaPredicted RBP24.99■■□□□ 1.59
CAPN1-206ENST00000526966 C7orf43Q8WVR3 580 aa24.99■■□□□ 1.59
CAPN1-206ENST00000526966 SCN4AP35499 1836 aa24.98■■□□□ 1.59
CAPN1-206ENST00000526966 NUP98P52948 1817 aa24.96■■□□□ 1.59
CAPN1-206ENST00000526966 NPR1P16066 1061 aa24.96■■□□□ 1.59
CAPN1-206ENST00000526966 COL13A1Q5TAT6 717 aaPredicted RBP24.96■■□□□ 1.59
CAPN1-206ENST00000526966 DDNO94850 711 aaPredicted RBP24.95■■□□□ 1.58
CAPN1-206ENST00000526966 TAF7Q15545 349 aaPredicted RBP24.95■■□□□ 1.58
CAPN1-206ENST00000526966 CCDC93Q567U6 631 aa24.95■■□□□ 1.58
CAPN1-206ENST00000526966 NIP7Q9Y221 180 aaKnown RBP eCLIP24.95■■□□□ 1.58
CAPN1-206ENST00000526966 TPTE2Q6XPS3 522 aa24.94■■□□□ 1.58
CAPN1-206ENST00000526966 CHADLQ6NUI6 762 aa24.92■■□□□ 1.58
CAPN1-206ENST00000526966 L3MBTL3Q96JM7 780 aaPredicted RBP24.92■■□□□ 1.58
CAPN1-206ENST00000526966 POTEIP0CG38 1075 aa24.91■■□□□ 1.58
CAPN1-206ENST00000526966 POTEJP0CG39 1038 aa24.91■■□□□ 1.58
CAPN1-206ENST00000526966 HLFQ16534 295 aa24.91■■□□□ 1.58
CAPN1-206ENST00000526966 FKBP4Q02790 459 aaKnown RBP eCLIP24.9■■□□□ 1.58
CAPN1-206ENST00000526966 MIS18AQ9NYP9 233 aa24.9■■□□□ 1.58
CAPN1-206ENST00000526966 SNED1Q8TER0 1413 aa24.89■■□□□ 1.58
CAPN1-206ENST00000526966 ADAMTSL1Q8N6G6 1762 aa24.88■■□□□ 1.57
CAPN1-206ENST00000526966 IQCA1LA6NCM1 817 aa24.88■■□□□ 1.57
CAPN1-206ENST00000526966 HSPA1AP0DMV8 641 aaKnown RBP24.88■■□□□ 1.57
CAPN1-206ENST00000526966 HSPA1BP0DMV9 641 aaKnown RBP24.88■■□□□ 1.57
CAPN1-206ENST00000526966 PNISRQ8TF01 805 aaKnown RBP24.88■■□□□ 1.57
CAPN1-206ENST00000526966 CREBZFQ9NS37 354 aa24.88■■□□□ 1.57
CAPN1-206ENST00000526966 OLFM4Q6UX06 510 aa24.87■■□□□ 1.57
CAPN1-206ENST00000526966 PLEKHF1Q96S99 279 aa24.87■■□□□ 1.57
CAPN1-206ENST00000526966 ABCC12Q96J65 1359 aa24.87■■□□□ 1.57
CAPN1-206ENST00000526966 RIC1Q4ADV7 1423 aa24.86■■□□□ 1.57
CAPN1-206ENST00000526966 FAM177BA6PVY3 158 aa24.86■■□□□ 1.57
CAPN1-206ENST00000526966 ERVV-1B6SEH8 477 aa24.86■■□□□ 1.57
CAPN1-206ENST00000526966 CRY2Q49AN0 593 aa24.86■■□□□ 1.57
CAPN1-206ENST00000526966 RTKN2Q8IZC4 609 aa24.86■■□□□ 1.57
CAPN1-206ENST00000526966 ZNF277Q9NRM2 450 aaPredicted RBP24.86■■□□□ 1.57
CAPN1-206ENST00000526966 ZNF541Q9H0D2 1346 aa24.86■■□□□ 1.57
CAPN1-206ENST00000526966 NEFMP07197 916 aa24.85■■□□□ 1.57
CAPN1-206ENST00000526966 ALDH1B1P30837 517 aa24.85■■□□□ 1.57
CAPN1-206ENST00000526966 EIF4A1P60842 406 aaKnown RBP24.85■■□□□ 1.57
CAPN1-206ENST00000526966 LDHDQ86WU2 507 aa24.85■■□□□ 1.57
CAPN1-206ENST00000526966 TAF1DQ9H5J8 278 aaPredicted RBP24.85■■□□□ 1.57
CAPN1-206ENST00000526966 MAP3K15Q6ZN16 1313 aa24.85■■□□□ 1.57
CAPN1-206ENST00000526966 PASKQ96RG2 1323 aa24.85■■□□□ 1.57
CAPN1-206ENST00000526966 IBTKQ9P2D0 1353 aaPredicted RBP24.84■■□□□ 1.57
CAPN1-206ENST00000526966 NFE2L2Q16236 605 aa24.83■■□□□ 1.57
CAPN1-206ENST00000526966 NYXQ9GZU5 481 aa24.83■■□□□ 1.57
CAPN1-206ENST00000526966 GTF2E1P29083 439 aaPredicted RBP24.82■■□□□ 1.56
CAPN1-206ENST00000526966 TNS4Q8IZW8 715 aa24.82■■□□□ 1.56
CAPN1-206ENST00000526966 FZD9O00144 591 aa24.81■■□□□ 1.56
CAPN1-206ENST00000526966 IARSP41252 1262 aaKnown RBP24.81■■□□□ 1.56
CAPN1-206ENST00000526966 TTLL7Q6ZT98 887 aa24.81■■□□□ 1.56
CAPN1-206ENST00000526966 PSMD1Q99460 953 aa24.81■■□□□ 1.56
CAPN1-206ENST00000526966 NUTM1Q86Y26 1132 aa24.8■■□□□ 1.56
CAPN1-206ENST00000526966 NGEFQ8N5V2 710 aa24.8■■□□□ 1.56
CAPN1-206ENST00000526966 THUMPD2Q9BTF0 503 aaKnown RBP24.8■■□□□ 1.56
CAPN1-206ENST00000526966 MKRN1Q9UHC7 482 aaKnown RBP24.8■■□□□ 1.56
CAPN1-206ENST00000526966 UBN2Q6ZU65 1347 aa24.8■■□□□ 1.56
CAPN1-206ENST00000526966 CNTNAP1P78357 1384 aa24.8■■□□□ 1.56
CAPN1-206ENST00000526966 COL4A5P29400 1685 aa24.79■■□□□ 1.56
CAPN1-206ENST00000526966 KIF6Q6ZMV9 814 aa24.79■■□□□ 1.56
CAPN1-206ENST00000526966 SYNE4Q8N205 404 aa24.79■■□□□ 1.56
CAPN1-206ENST00000526966 HACL1Q9UJ83 578 aa24.79■■□□□ 1.56
CAPN1-206ENST00000526966 RRP7AQ9Y3A4 280 aaKnown RBP24.79■■□□□ 1.56
CAPN1-206ENST00000526966 HOXA10P31260 410 aaPredicted RBP24.78■■□□□ 1.56
CAPN1-206ENST00000526966 CC2D2BQ6DHV5 1058 aa24.78■■□□□ 1.56
CAPN1-206ENST00000526966 ERBB4Q15303 1308 aa24.78■■□□□ 1.56
CAPN1-206ENST00000526966 ITGBL1O95965 494 aaPredicted RBP24.77■■□□□ 1.56
CAPN1-206ENST00000526966 MYL6BP14649 208 aa24.77■■□□□ 1.56
CAPN1-206ENST00000526966 EPHX2P34913 555 aa24.76■■□□□ 1.55
CAPN1-206ENST00000526966 ZNF34Q8IZ26 560 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms