RNA–Protein interactions for RNA: ENST00000526789.1

COMMD9-204, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-204ENST00000526789 AMIGO3Q86WK7 504 aa10.04□□□□□ -0.8
COMMD9-204ENST00000526789 SLC12A5Q9H2X9 1139 aa10.04□□□□□ -0.8
COMMD9-204ENST00000526789 PARP3Q9Y6F1 533 aa10.04□□□□□ -0.8
COMMD9-204ENST00000526789 SMG6Q86US8 1419 aaKnown RBP10.04□□□□□ -0.8
COMMD9-204ENST00000526789 MAP3K19Q56UN5 1328 aa10.04□□□□□ -0.8
COMMD9-204ENST00000526789 USP54Q70EL1 1684 aa10.03□□□□□ -0.8
COMMD9-204ENST00000526789 ATP6V1AP38606 617 aa10.03□□□□□ -0.8
COMMD9-204ENST00000526789 GPIHBP1Q8IV16 184 aa10.03□□□□□ -0.8
COMMD9-204ENST00000526789 HCSTQ9UBK5 93 aa10.03□□□□□ -0.8
COMMD9-204ENST00000526789 PXDNLA1KZ92 1463 aa10.03□□□□□ -0.8
COMMD9-204ENST00000526789 SBNO2Q9Y2G9 1366 aa10.02□□□□□ -0.8
COMMD9-204ENST00000526789 UBR3Q6ZT12 1888 aa10.02□□□□□ -0.8
COMMD9-204ENST00000526789 EDC4Q6P2E9 1401 aaKnown RBP10.02□□□□□ -0.81
COMMD9-204ENST00000526789 LOC102724428A0A0B4J2F2 783 aa10.02□□□□□ -0.81
COMMD9-204ENST00000526789 SIK1P57059 783 aa10.02□□□□□ -0.81
COMMD9-204ENST00000526789 TMF1P82094 1093 aa10.02□□□□□ -0.81
COMMD9-204ENST00000526789 TRAPPC3LQ5T215 181 aa10.02□□□□□ -0.81
COMMD9-204ENST00000526789 NBPF6Q5VWK0 638 aa10.02□□□□□ -0.81
COMMD9-204ENST00000526789 LINC00116Q8NCU8 138 aa10.02□□□□□ -0.81
COMMD9-204ENST00000526789 DDX12PQ92771 950 aa10.02□□□□□ -0.81
COMMD9-204ENST00000526789 NBPF4Q96M43 638 aa10.02□□□□□ -0.81
COMMD9-204ENST00000526789 CICQ96RK0 1608 aaPredicted RBP10.02□□□□□ -0.81
COMMD9-204ENST00000526789 CGNL1Q0VF96 1302 aa10.02□□□□□ -0.81
COMMD9-204ENST00000526789 ZNF316A6NFI3 1004 aaPredicted RBP10.01□□□□□ -0.81
COMMD9-204ENST00000526789 RRS1Q15050 365 aaKnown RBP10.01□□□□□ -0.81
COMMD9-204ENST00000526789 DALRD3Q5D0E6 543 aaKnown RBP10.01□□□□□ -0.81
COMMD9-204ENST00000526789 NLGN1Q8N2Q7 840 aa10.01□□□□□ -0.81
COMMD9-204ENST00000526789 TMOD3Q9NYL9 352 aa10.01□□□□□ -0.81
COMMD9-204ENST00000526789 PIM2Q9P1W9 311 aa10.01□□□□□ -0.81
COMMD9-204ENST00000526789 RTCBQ9Y3I0 505 aaKnown RBP10.01□□□□□ -0.81
COMMD9-204ENST00000526789 PCDHGA4Q9Y5G9 962 aa10.01□□□□□ -0.81
COMMD9-204ENST00000526789 RFC4P35249 363 aa10□□□□□ -0.81
COMMD9-204ENST00000526789 NEUROD1Q13562 356 aa10□□□□□ -0.81
COMMD9-204ENST00000526789 PIGBQ92521 554 aa10□□□□□ -0.81
COMMD9-204ENST00000526789 L3MBTL2Q969R5 705 aa10□□□□□ -0.81
COMMD9-204ENST00000526789 AIDAQ96BJ3 306 aa10□□□□□ -0.81
COMMD9-204ENST00000526789 MKRN1Q9UHC7 482 aaKnown RBP10□□□□□ -0.81
COMMD9-204ENST00000526789 ITGB4P16144 1822 aa9.99□□□□□ -0.81
COMMD9-204ENST00000526789 ARSIQ5FYB1 569 aa9.99□□□□□ -0.81
COMMD9-204ENST00000526789 A0A1W2PP64 1363 aa9.99□□□□□ -0.81
COMMD9-204ENST00000526789 PKD1L3Q7Z443 1732 aa9.99□□□□□ -0.81
COMMD9-204ENST00000526789 TOGARAM1Q9Y4F4 1720 aa9.99□□□□□ -0.81
COMMD9-204ENST00000526789 ZMYND10O75800 440 aa9.98□□□□□ -0.81
COMMD9-204ENST00000526789 VEGFAP15692 232 aaPredicted RBP9.98□□□□□ -0.81
COMMD9-204ENST00000526789 OSBPP22059 807 aa9.98□□□□□ -0.81
COMMD9-204ENST00000526789 TNRC6CQ9HCJ0 1690 aaKnown RBP9.98□□□□□ -0.81
COMMD9-204ENST00000526789 PPM1GO15355 546 aaPredicted RBP9.97□□□□□ -0.81
COMMD9-204ENST00000526789 CYP27B1O15528 508 aa9.97□□□□□ -0.81
COMMD9-204ENST00000526789 ITPK1Q13572 414 aa9.97□□□□□ -0.81
COMMD9-204ENST00000526789 FAM161AQ3B820 660 aa9.97□□□□□ -0.81
COMMD9-204ENST00000526789 CARD11Q9BXL7 1154 aa9.97□□□□□ -0.81
COMMD9-204ENST00000526789 SLC24A3Q9HC58 644 aa9.97□□□□□ -0.81
COMMD9-204ENST00000526789 ASAP1Q9ULH1 1129 aa9.97□□□□□ -0.81
COMMD9-204ENST00000526789 SPG7Q9UQ90 795 aa9.97□□□□□ -0.81
COMMD9-204ENST00000526789 CD163L1Q9NR16 1453 aa9.97□□□□□ -0.81
COMMD9-204ENST00000526789 CHRNA5P30532 468 aa9.96□□□□□ -0.82
COMMD9-204ENST00000526789 RASSF7Q02833 373 aa9.96□□□□□ -0.82
COMMD9-204ENST00000526789 C10orf71Q711Q0 1435 aa9.96□□□□□ -0.82
COMMD9-204ENST00000526789 KIF13BQ9NQT8 1826 aa9.96□□□□□ -0.82
COMMD9-204ENST00000526789 GPR37O15354 613 aa9.95□□□□□ -0.82
COMMD9-204ENST00000526789 HSP90AB2PQ58FF8 381 aa9.95□□□□□ -0.82
COMMD9-204ENST00000526789 DCAF5Q96JK2 942 aa9.95□□□□□ -0.82
COMMD9-204ENST00000526789 GGNBP2Q9H3C7 697 aa9.95□□□□□ -0.82
COMMD9-204ENST00000526789 RTL1A6NKG5 1358 aa9.95□□□□□ -0.82
COMMD9-204ENST00000526789 ARFGEF1Q9Y6D6 1849 aa9.95□□□□□ -0.82
COMMD9-204ENST00000526789 FOXN1O15353 648 aa9.94□□□□□ -0.82
COMMD9-204ENST00000526789 C4AP0C0L4 1744 aa9.93□□□□□ -0.82
COMMD9-204ENST00000526789 KIAA1551Q9HCM1 1747 aa9.93□□□□□ -0.82
COMMD9-204ENST00000526789 GLTPD2A6NH11 291 aa9.93□□□□□ -0.82
COMMD9-204ENST00000526789 GYS1P13807 737 aa9.93□□□□□ -0.82
COMMD9-204ENST00000526789 KHSRPQ92945 711 aaKnown RBP eCLIP9.93□□□□□ -0.82
COMMD9-204ENST00000526789 SBF1O95248 1867 aa9.92□□□□□ -0.82
COMMD9-204ENST00000526789 BRCA1P38398 1863 aaKnown RBP9.92□□□□□ -0.82
COMMD9-204ENST00000526789 CCDC85CA6NKD9 419 aa9.92□□□□□ -0.82
COMMD9-204ENST00000526789 LMNB1P20700 586 aa9.92□□□□□ -0.82
COMMD9-204ENST00000526789 KCNA3P22001 575 aa9.92□□□□□ -0.82
COMMD9-204ENST00000526789 CTCFP49711 727 aaPredicted RBP9.92□□□□□ -0.82
COMMD9-204ENST00000526789 SIN3AQ96ST3 1273 aa9.92□□□□□ -0.82
COMMD9-204ENST00000526789 LBX1P52954 281 aa9.91□□□□□ -0.82
COMMD9-204ENST00000526789 IFNL2Q8IZJ0 200 aa9.91□□□□□ -0.82
COMMD9-204ENST00000526789 ATG3Q9NT62 314 aa9.91□□□□□ -0.82
COMMD9-204ENST00000526789 SRP68Q9UHB9 627 aaKnown RBP9.91□□□□□ -0.82
COMMD9-204ENST00000526789 FLT4P35916 1363 aa9.9□□□□□ -0.82
COMMD9-204ENST00000526789 CCDC88AQ3V6T2 1871 aa9.9□□□□□ -0.82
COMMD9-204ENST00000526789 PTCD1O75127 700 aaKnown RBP9.9□□□□□ -0.82
COMMD9-204ENST00000526789 RPS6KA4O75676 772 aa9.9□□□□□ -0.82
COMMD9-204ENST00000526789 NUDT7P0C024 238 aa9.9□□□□□ -0.82
COMMD9-204ENST00000526789 MLLT1Q03111 559 aaPredicted RBP9.9□□□□□ -0.82
COMMD9-204ENST00000526789 ABHD8Q96I13 439 aa9.9□□□□□ -0.82
COMMD9-204ENST00000526789 PRDM10Q9NQV6 1147 aa9.9□□□□□ -0.82
COMMD9-204ENST00000526789 MAP2P11137 1827 aaKnown RBP9.9□□□□□ -0.82
COMMD9-204ENST00000526789 INSRP06213 1382 aa9.89□□□□□ -0.83
COMMD9-204ENST00000526789 ZC3H4Q9UPT8 1303 aaKnown RBP9.89□□□□□ -0.83
COMMD9-204ENST00000526789 ZPR1O75312 459 aa9.89□□□□□ -0.83
COMMD9-204ENST00000526789 PCDHGA10Q9Y5H3 936 aa9.89□□□□□ -0.83
COMMD9-204ENST00000526789 PHKG2P15735 406 aa9.88□□□□□ -0.83
COMMD9-204ENST00000526789 PBX2P40425 430 aa9.88□□□□□ -0.83
COMMD9-204ENST00000526789 CABP4P57796 275 aa9.88□□□□□ -0.83
COMMD9-204ENST00000526789 DDR1Q08345 913 aa9.88□□□□□ -0.83
COMMD9-204ENST00000526789 GRM1Q13255 1194 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms