RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 ARHGAP23Q9P227 1491 aa8.56□□□□□ -1.04
SF3B2-205ENST00000526653 SETBP1Q9Y6X0 1596 aa8.56□□□□□ -1.04
SF3B2-205ENST00000526653 ADGBQ8N7X0 1667 aa8.56□□□□□ -1.04
SF3B2-205ENST00000526653 RGS12O14924 1447 aa8.55□□□□□ -1.04
SF3B2-205ENST00000526653 FGD6Q6ZV73 1430 aa8.55□□□□□ -1.04
SF3B2-205ENST00000526653 PHLPP1O60346 1717 aa8.55□□□□□ -1.04
SF3B2-205ENST00000526653 LILRA1O75019 489 aa8.55□□□□□ -1.04
SF3B2-205ENST00000526653 ADD1P35611 737 aaKnown RBP8.55□□□□□ -1.04
SF3B2-205ENST00000526653 CCDC125Q86Z20 511 aa8.55□□□□□ -1.04
SF3B2-205ENST00000526653 ZNF395Q9H8N7 513 aaPredicted RBP8.55□□□□□ -1.04
SF3B2-205ENST00000526653 USP21Q9UK80 565 aa8.55□□□□□ -1.04
SF3B2-205ENST00000526653 ZC3H13Q5T200 1668 aaKnown RBP8.55□□□□□ -1.04
SF3B2-205ENST00000526653 MAP3K1Q13233 1512 aa8.54□□□□□ -1.04
SF3B2-205ENST00000526653 PPP1R15AO75807 674 aaPredicted RBP8.54□□□□□ -1.04
SF3B2-205ENST00000526653 ADH1AP07327 375 aa8.54□□□□□ -1.04
SF3B2-205ENST00000526653 POLMQ9NP87 494 aaPredicted RBP8.54□□□□□ -1.04
SF3B2-205ENST00000526653 PRDM15P57071 1507 aaPredicted RBP8.54□□□□□ -1.04
SF3B2-205ENST00000526653 ZBBXA8MT70 800 aa8.53□□□□□ -1.04
SF3B2-205ENST00000526653 FBXO45P0C2W1 286 aa8.53□□□□□ -1.04
SF3B2-205ENST00000526653 DEFB132Q7Z7B7 95 aa8.53□□□□□ -1.04
SF3B2-205ENST00000526653 CCDC155Q8N6L0 562 aa8.53□□□□□ -1.04
SF3B2-205ENST00000526653 GPR161Q8N6U8 529 aaKnown RBP8.53□□□□□ -1.04
SF3B2-205ENST00000526653 RRP7BPQ9NSQ0 103 aa8.53□□□□□ -1.04
SF3B2-205ENST00000526653 SLIT1O75093 1534 aa8.53□□□□□ -1.04
SF3B2-205ENST00000526653 SEPT12Q8IYM1 358 aa8.52□□□□□ -1.05
SF3B2-205ENST00000526653 KDF1Q8NAX2 398 aaPredicted RBP8.52□□□□□ -1.05
SF3B2-205ENST00000526653 RNF217Q8TC41 542 aa8.52□□□□□ -1.05
SF3B2-205ENST00000526653 TRPC5Q9UL62 973 aaPredicted RBP8.52□□□□□ -1.05
SF3B2-205ENST00000526653 TBX22Q9Y458 520 aa8.52□□□□□ -1.05
SF3B2-205ENST00000526653 PCDHB9Q9Y5E1 797 aa8.52□□□□□ -1.05
SF3B2-205ENST00000526653 ABCC3O15438 1527 aa8.52□□□□□ -1.05
SF3B2-205ENST00000526653 CFAP65Q6ZU64 1925 aaKnown RBP8.51□□□□□ -1.05
SF3B2-205ENST00000526653 SLC35F4A4IF30 521 aa8.51□□□□□ -1.05
SF3B2-205ENST00000526653 CYLDQ9NQC7 956 aa8.51□□□□□ -1.05
SF3B2-205ENST00000526653 CCDC141Q6ZP82 1450 aa8.51□□□□□ -1.05
SF3B2-205ENST00000526653 COL16A1Q07092 1604 aaPredicted RBP8.51□□□□□ -1.05
SF3B2-205ENST00000526653 GIGYF1O75420 1035 aaPredicted RBP8.5□□□□□ -1.05
SF3B2-205ENST00000526653 PTGIRP43119 386 aa8.5□□□□□ -1.05
SF3B2-205ENST00000526653 KRT76Q01546 638 aa8.5□□□□□ -1.05
SF3B2-205ENST00000526653 NANOS1Q8WY41 292 aaKnown RBP8.5□□□□□ -1.05
SF3B2-205ENST00000526653 AMOTL2Q9Y2J4 779 aa8.5□□□□□ -1.05
SF3B2-205ENST00000526653 TET3O43151 1660 aa8.49□□□□□ -1.05
SF3B2-205ENST00000526653 UBR1Q8IWV7 1749 aa8.49□□□□□ -1.05
SF3B2-205ENST00000526653 FOXD4L5Q5VV16 416 aaPredicted RBP8.49□□□□□ -1.05
SF3B2-205ENST00000526653 FYCO1Q9BQS8 1478 aa8.49□□□□□ -1.05
SF3B2-205ENST00000526653 ITGA6P23229 1130 aa8.48□□□□□ -1.05
SF3B2-205ENST00000526653 YY1P25490 414 aa8.48□□□□□ -1.05
SF3B2-205ENST00000526653 SF3B2Q13435 895 aaKnown RBP8.48□□□□□ -1.05
SF3B2-205ENST00000526653 SLC52A1Q9NWF4 448 aa8.48□□□□□ -1.05
SF3B2-205ENST00000526653 NKTRP30414 1462 aaKnown RBP8.47□□□□□ -1.05
SF3B2-205ENST00000526653 SENP3-EIF4A1A0A087X0R7 540 aa8.47□□□□□ -1.05
SF3B2-205ENST00000526653 FNBP4Q8N3X1 1017 aaPredicted RBP8.47□□□□□ -1.05
SF3B2-205ENST00000526653 BANK1Q8NDB2 785 aa8.47□□□□□ -1.05
SF3B2-205ENST00000526653 CNTNAP3BQ96NU0 1288 aa8.47□□□□□ -1.05
SF3B2-205ENST00000526653 COL25A1Q9BXS0 654 aaPredicted RBP8.47□□□□□ -1.05
SF3B2-205ENST00000526653 CNTNAP3Q9BZ76 1288 aa8.47□□□□□ -1.05
SF3B2-205ENST00000526653 EP400Q96L91 3159 aa8.47□□□□□ -1.05
SF3B2-205ENST00000526653 GPR37L1O60883 481 aa8.46□□□□□ -1.06
SF3B2-205ENST00000526653 VWA5B2Q8N398 1253 aa8.46□□□□□ -1.06
SF3B2-205ENST00000526653 MTMR14Q8NCE2 650 aa8.46□□□□□ -1.06
SF3B2-205ENST00000526653 ARHGAP31Q2M1Z3 1444 aa8.46□□□□□ -1.06
SF3B2-205ENST00000526653 SETD5Q9C0A6 1442 aa8.46□□□□□ -1.06
SF3B2-205ENST00000526653 NCOA3Q9Y6Q9 1424 aa8.46□□□□□ -1.06
SF3B2-205ENST00000526653 CAMSAP2Q08AD1 1489 aa8.45□□□□□ -1.06
SF3B2-205ENST00000526653 CDC14CA4D256 554 aa8.45□□□□□ -1.06
SF3B2-205ENST00000526653 NR1H3Q13133 447 aa8.45□□□□□ -1.06
SF3B2-205ENST00000526653 RNFT1Q5M7Z0 435 aa8.45□□□□□ -1.06
SF3B2-205ENST00000526653 PNPLA6Q8IY17 1366 aa8.45□□□□□ -1.06
SF3B2-205ENST00000526653 EFCAB6Q5THR3 1501 aa8.44□□□□□ -1.06
SF3B2-205ENST00000526653 TIAM1Q13009 1591 aa8.44□□□□□ -1.06
SF3B2-205ENST00000526653 ATP5J2-PTCD1G3V325 749 aa8.44□□□□□ -1.06
SF3B2-205ENST00000526653 LYSMD3Q7Z3D4 306 aa8.44□□□□□ -1.06
SF3B2-205ENST00000526653 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.44□□□□□ -1.06
SF3B2-205ENST00000526653 SNRKQ9NRH2 765 aa8.44□□□□□ -1.06
SF3B2-205ENST00000526653 CHIC2Q9UKJ5 165 aa8.44□□□□□ -1.06
SF3B2-205ENST00000526653 KANK1Q14678 1352 aa8.44□□□□□ -1.06
SF3B2-205ENST00000526653 PLEKHG1Q9ULL1 1385 aa8.44□□□□□ -1.06
SF3B2-205ENST00000526653 CEP162Q5TB80 1403 aa8.44□□□□□ -1.06
SF3B2-205ENST00000526653 RNF144AP50876 292 aaPredicted RBP8.43□□□□□ -1.06
SF3B2-205ENST00000526653 ERVK-9P63128 1117 aa8.43□□□□□ -1.06
SF3B2-205ENST00000526653 TPRNQ4KMQ1 711 aa8.43□□□□□ -1.06
SF3B2-205ENST00000526653 SV2AQ7L0J3 742 aa8.43□□□□□ -1.06
SF3B2-205ENST00000526653 PRICKLE2Q7Z3G6 844 aa8.43□□□□□ -1.06
SF3B2-205ENST00000526653 ORAI2Q96SN7 254 aa8.43□□□□□ -1.06
SF3B2-205ENST00000526653 NDUFB9Q9Y6M9 179 aa8.43□□□□□ -1.06
SF3B2-205ENST00000526653 PIK3C2BO00750 1634 aa8.43□□□□□ -1.06
SF3B2-205ENST00000526653 AHDC1Q5TGY3 1603 aaPredicted RBP8.43□□□□□ -1.06
SF3B2-205ENST00000526653 MCCD1P59942 119 aaPredicted RBP8.42□□□□□ -1.06
SF3B2-205ENST00000526653 RNF20Q5VTR2 975 aa8.42□□□□□ -1.06
SF3B2-205ENST00000526653 CC2D2BQ6DHV5 1058 aa8.42□□□□□ -1.06
SF3B2-205ENST00000526653 RIMS2Q9UQ26 1411 aa8.42□□□□□ -1.06
SF3B2-205ENST00000526653 SHPRHQ149N8 1683 aa8.41□□□□□ -1.06
SF3B2-205ENST00000526653 BLMP54132 1417 aaPredicted RBP8.41□□□□□ -1.06
SF3B2-205ENST00000526653 A0A1W2PRU2 124 aa8.41□□□□□ -1.06
SF3B2-205ENST00000526653 MEN1O00255 615 aa8.41□□□□□ -1.06
SF3B2-205ENST00000526653 RHOQP17081 205 aa8.41□□□□□ -1.06
SF3B2-205ENST00000526653 SCTRP47872 440 aa8.41□□□□□ -1.06
SF3B2-205ENST00000526653 R3HDM1Q15032 1099 aaKnown RBP8.41□□□□□ -1.06
SF3B2-205ENST00000526653 CUEDC1Q9NWM3 386 aaPredicted RBP8.41□□□□□ -1.06
SF3B2-205ENST00000526653 DIP2AQ14689 1571 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms