RNA–Protein interactions for RNA: ENST00000526606.1

AMBRA1-205, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 4

Gene AMBRA1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-205ENST00000526606 HEG1Q9ULI3 1381 aa26.62■■□□□ 1.85
AMBRA1-205ENST00000526606 A1BGP04217 495 aa26.62■■□□□ 1.85
AMBRA1-205ENST00000526606 RASSF10A6NK89 507 aa26.61■■□□□ 1.85
AMBRA1-205ENST00000526606 EAPPQ56P03 285 aaPredicted RBP26.61■■□□□ 1.85
AMBRA1-205ENST00000526606 SOGA3Q5TF21 947 aa26.61■■□□□ 1.85
AMBRA1-205ENST00000526606 TTC5Q8N0Z6 440 aa26.61■■□□□ 1.85
AMBRA1-205ENST00000526606 IL17REQ8NFR9 667 aa26.61■■□□□ 1.85
AMBRA1-205ENST00000526606 ZNF330Q9Y3S2 320 aaPredicted RBP26.61■■□□□ 1.85
AMBRA1-205ENST00000526606 FAM161AQ3B820 660 aa26.6■■□□□ 1.85
AMBRA1-205ENST00000526606 ZNF790Q6PG37 636 aa26.6■■□□□ 1.85
AMBRA1-205ENST00000526606 TIMELESSQ9UNS1 1208 aa26.6■■□□□ 1.85
AMBRA1-205ENST00000526606 HSPA5P11021 654 aaKnown RBP26.59■■□□□ 1.85
AMBRA1-205ENST00000526606 DEFB115Q30KQ5 88 aa26.59■■□□□ 1.85
AMBRA1-205ENST00000526606 OLFM4Q6UX06 510 aa26.59■■□□□ 1.85
AMBRA1-205ENST00000526606 TEX13AQ9BXU3 409 aaPredicted RBP26.59■■□□□ 1.85
AMBRA1-205ENST00000526606 AMER1Q5JTC6 1135 aaPredicted RBP26.58■■□□□ 1.85
AMBRA1-205ENST00000526606 ZNF277Q9NRM2 450 aaPredicted RBP26.58■■□□□ 1.85
AMBRA1-205ENST00000526606 HACL1Q9UJ83 578 aa26.58■■□□□ 1.85
AMBRA1-205ENST00000526606 EPHX2P34913 555 aa26.57■■□□□ 1.84
AMBRA1-205ENST00000526606 ST5P78524 1137 aa26.57■■□□□ 1.84
AMBRA1-205ENST00000526606 MAP1SQ66K74 1059 aaPredicted RBP26.57■■□□□ 1.84
AMBRA1-205ENST00000526606 CNTROBQ8N137 903 aa26.57■■□□□ 1.84
AMBRA1-205ENST00000526606 CLEC11AQ9Y240 323 aa26.57■■□□□ 1.84
AMBRA1-205ENST00000526606 FKBP4Q02790 459 aaKnown RBP eCLIP26.56■■□□□ 1.84
AMBRA1-205ENST00000526606 CCDC93Q567U6 631 aa26.56■■□□□ 1.84
AMBRA1-205ENST00000526606 KNSTRNQ9Y448 316 aa26.56■■□□□ 1.84
AMBRA1-205ENST00000526606 WDR33Q9C0J8 1336 aaKnown RBP26.56■■□□□ 1.84
AMBRA1-205ENST00000526606 KLRG2A4D1S0 409 aaPredicted RBP26.55■■□□□ 1.84
AMBRA1-205ENST00000526606 SIPA1L3O60292 1781 aaPredicted RBP26.54■■□□□ 1.84
AMBRA1-205ENST00000526606 KCNQ3O43525 872 aa26.54■■□□□ 1.84
AMBRA1-205ENST00000526606 FZD9O00144 591 aa26.53■■□□□ 1.84
AMBRA1-205ENST00000526606 NPHP1O15259 732 aa26.53■■□□□ 1.84
AMBRA1-205ENST00000526606 EIF4G2P78344 907 aaKnown RBP eCLIP26.53■■□□□ 1.84
AMBRA1-205ENST00000526606 RNF123Q5XPI4 1314 aa26.53■■□□□ 1.84
AMBRA1-205ENST00000526606 BCORQ6W2J9 1755 aa26.53■■□□□ 1.84
AMBRA1-205ENST00000526606 NPR1P16066 1061 aa26.52■■□□□ 1.84
AMBRA1-205ENST00000526606 MAP2K1Q02750 393 aaPredicted RBP26.52■■□□□ 1.84
AMBRA1-205ENST00000526606 DZIP3Q86Y13 1208 aaKnown RBP26.52■■□□□ 1.84
AMBRA1-205ENST00000526606 PIP4K2AP48426 406 aaPredicted RBP26.51■■□□□ 1.83
AMBRA1-205ENST00000526606 TEFQ10587 303 aa26.51■■□□□ 1.83
AMBRA1-205ENST00000526606 PNMA8AQ86V59 439 aaPredicted RBP26.51■■□□□ 1.83
AMBRA1-205ENST00000526606 DIAPH1O60610 1272 aaKnown RBP26.5■■□□□ 1.83
AMBRA1-205ENST00000526606 RGS19P49795 217 aa26.5■■□□□ 1.83
AMBRA1-205ENST00000526606 FMR1Q06787 632 aaKnown RBP eCLIP26.5■■□□□ 1.83
AMBRA1-205ENST00000526606 NBPF5PQ86XG9 351 aaPredicted RBP26.5■■□□□ 1.83
AMBRA1-205ENST00000526606 FMNL2Q96PY5 1086 aa26.5■■□□□ 1.83
AMBRA1-205ENST00000526606 USP16Q9Y5T5 823 aa26.5■■□□□ 1.83
AMBRA1-205ENST00000526606 GNAT3A8MTJ3 354 aa26.48■■□□□ 1.83
AMBRA1-205ENST00000526606 CLEC4GQ6UXB4 293 aa26.48■■□□□ 1.83
AMBRA1-205ENST00000526606 SYNE4Q8N205 404 aa26.48■■□□□ 1.83
AMBRA1-205ENST00000526606 DDX21Q9NR30 783 aaKnown RBP eCLIP26.48■■□□□ 1.83
AMBRA1-205ENST00000526606 PRAMEF22A3QJZ6 481 aa26.47■■□□□ 1.83
AMBRA1-205ENST00000526606 IARSP41252 1262 aaKnown RBP26.47■■□□□ 1.83
AMBRA1-205ENST00000526606 RTKN2Q8IZC4 609 aa26.47■■□□□ 1.83
AMBRA1-205ENST00000526606 ABT1Q9ULW3 272 aaKnown RBP26.47■■□□□ 1.83
AMBRA1-205ENST00000526606 TNRC18O15417 2968 aaPredicted RBP26.47■■□□□ 1.83
AMBRA1-205ENST00000526606 SNED1Q8TER0 1413 aa26.47■■□□□ 1.83
AMBRA1-205ENST00000526606 GPC2Q8N158 579 aa26.46■■□□□ 1.83
AMBRA1-205ENST00000526606 LTBP1Q14766 1721 aa26.45■■□□□ 1.83
AMBRA1-205ENST00000526606 NPM2Q86SE8 214 aaKnown RBP26.45■■□□□ 1.82
AMBRA1-205ENST00000526606 CEMIPQ8WUJ3 1361 aa26.45■■□□□ 1.82
AMBRA1-205ENST00000526606 COL4A5P29400 1685 aa26.44■■□□□ 1.82
AMBRA1-205ENST00000526606 THSD7BQ9C0I4 1608 aa26.44■■□□□ 1.82
AMBRA1-205ENST00000526606 CCDC85CA6NKD9 419 aa26.44■■□□□ 1.82
AMBRA1-205ENST00000526606 MLLT1Q03111 559 aaPredicted RBP26.44■■□□□ 1.82
AMBRA1-205ENST00000526606 CAPNS2Q96L46 248 aa26.43■■□□□ 1.82
AMBRA1-205ENST00000526606 CST9Q5W186 159 aa26.42■■□□□ 1.82
AMBRA1-205ENST00000526606 CYP4F22Q6NT55 531 aa26.42■■□□□ 1.82
AMBRA1-205ENST00000526606 TPTE2Q6XPS3 522 aa26.42■■□□□ 1.82
AMBRA1-205ENST00000526606 BTBD11A6QL63 1104 aa26.41■■□□□ 1.82
AMBRA1-205ENST00000526606 GAS2L2Q8NHY3 880 aa26.41■■□□□ 1.82
AMBRA1-205ENST00000526606 COL3A1P02461 1466 aaPredicted RBP26.41■■□□□ 1.82
AMBRA1-205ENST00000526606 NBPF26B4DH59 902 aa26.4■■□□□ 1.82
AMBRA1-205ENST00000526606 PER1O15534 1290 aaPredicted RBP26.4■■□□□ 1.82
AMBRA1-205ENST00000526606 NBPF10Q6P3W6 841 aaKnown RBP26.4■■□□□ 1.82
AMBRA1-205ENST00000526606 NBPF15Q8N660 670 aa26.4■■□□□ 1.82
AMBRA1-205ENST00000526606 GPR101Q96P66 508 aaPredicted RBP26.4■■□□□ 1.82
AMBRA1-205ENST00000526606 NIP7Q9Y221 180 aaKnown RBP eCLIP26.4■■□□□ 1.82
AMBRA1-205ENST00000526606 FAM177BA6PVY3 158 aa26.39■■□□□ 1.82
AMBRA1-205ENST00000526606 ALDH1B1P30837 517 aa26.39■■□□□ 1.82
AMBRA1-205ENST00000526606 EPS15P42566 896 aa26.39■■□□□ 1.82
AMBRA1-205ENST00000526606 SCNN1DP51172 638 aa26.39■■□□□ 1.82
AMBRA1-205ENST00000526606 PHACTR3Q96KR7 559 aa26.39■■□□□ 1.82
AMBRA1-205ENST00000526606 PSMD1Q99460 953 aa26.39■■□□□ 1.82
AMBRA1-205ENST00000526606 TRAF5O00463 557 aa26.38■■□□□ 1.81
AMBRA1-205ENST00000526606 TSKSQ9UJT2 592 aa26.38■■□□□ 1.81
AMBRA1-205ENST00000526606 ZNF652Q9Y2D9 606 aa26.38■■□□□ 1.81
AMBRA1-205ENST00000526606 GJA3Q9Y6H8 435 aa26.38■■□□□ 1.81
AMBRA1-205ENST00000526606 HLFQ16534 295 aa26.37■■□□□ 1.81
AMBRA1-205ENST00000526606 SLC51AQ86UW1 340 aa26.37■■□□□ 1.81
AMBRA1-205ENST00000526606 U2SURPO15042 1029 aaKnown RBP26.36■■□□□ 1.81
AMBRA1-205ENST00000526606 CC2D1BQ5T0F9 858 aaKnown RBP26.36■■□□□ 1.81
AMBRA1-205ENST00000526606 JDP2Q8WYK2 163 aa26.36■■□□□ 1.81
AMBRA1-205ENST00000526606 RGL2O15211 777 aa26.35■■□□□ 1.81
AMBRA1-205ENST00000526606 AOC2O75106 756 aa26.35■■□□□ 1.81
AMBRA1-205ENST00000526606 ECE1P42892 770 aa26.35■■□□□ 1.81
AMBRA1-205ENST00000526606 GRM1Q13255 1194 aa26.35■■□□□ 1.81
AMBRA1-205ENST00000526606 TLL2Q9Y6L7 1015 aa26.35■■□□□ 1.81
AMBRA1-205ENST00000526606 SNRPA1P09661 255 aaKnown RBP26.34■■□□□ 1.81
AMBRA1-205ENST00000526606 CRY2Q49AN0 593 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms