RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 PHACTR3Q96KR7 559 aa15.68■□□□□ 0.1
CAPN1-204ENST00000526468 BRIP1Q9BX63 1249 aa15.68■□□□□ 0.1
CAPN1-204ENST00000526468 PDZRN3Q9UPQ7 1066 aa15.68■□□□□ 0.1
CAPN1-204ENST00000526468 KCNQ3O43525 872 aa15.67■□□□□ 0.1
CAPN1-204ENST00000526468 C21orf2O43822 256 aa15.67■□□□□ 0.1
CAPN1-204ENST00000526468 VEGFAP15692 232 aaPredicted RBP15.67■□□□□ 0.1
CAPN1-204ENST00000526468 SETDB2Q96T68 719 aa15.67■□□□□ 0.1
CAPN1-204ENST00000526468 TAOK3Q9H2K8 898 aa15.67■□□□□ 0.1
CAPN1-204ENST00000526468 U2AF1L5P0DN76 240 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-204ENST00000526468 U2AF1Q01081 240 aaKnown RBP eCLIP15.66■□□□□ 0.1
CAPN1-204ENST00000526468 RTF1Q92541 710 aaKnown RBP15.66■□□□□ 0.1
CAPN1-204ENST00000526468 NUDCQ9Y266 331 aa15.66■□□□□ 0.1
CAPN1-204ENST00000526468 ERFEQ4G0M1 354 aa15.65■□□□□ 0.1
CAPN1-204ENST00000526468 PRPF40BQ6NWY9 871 aaKnown RBP15.65■□□□□ 0.1
CAPN1-204ENST00000526468 MCM10Q7L590 875 aa15.65■□□□□ 0.1
CAPN1-204ENST00000526468 ZNF652Q9Y2D9 606 aa15.65■□□□□ 0.1
CAPN1-204ENST00000526468 TRPM7Q96QT4 1865 aa15.65■□□□□ 0.1
CAPN1-204ENST00000526468 ADAMTSL1Q8N6G6 1762 aa15.64■□□□□ 0.1
CAPN1-204ENST00000526468 PRAMEF22A3QJZ6 481 aa15.64■□□□□ 0.09
CAPN1-204ENST00000526468 JMYQ8N9B5 988 aa15.64■□□□□ 0.09
CAPN1-204ENST00000526468 CNKSR1Q969H4 720 aa15.64■□□□□ 0.09
CAPN1-204ENST00000526468 LTBP3Q9NS15 1303 aa15.64■□□□□ 0.09
CAPN1-204ENST00000526468 PPP2R1AP30153 589 aa15.63■□□□□ 0.09
CAPN1-204ENST00000526468 STYK1Q6J9G0 422 aa15.63■□□□□ 0.09
CAPN1-204ENST00000526468 DPY19L2Q6NUT2 758 aa15.63■□□□□ 0.09
CAPN1-204ENST00000526468 NBPF5PQ86XG9 351 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-204ENST00000526468 SNRPA1P09661 255 aaKnown RBP15.62■□□□□ 0.09
CAPN1-204ENST00000526468 SOGA3Q5TF21 947 aa15.62■□□□□ 0.09
CAPN1-204ENST00000526468 MASTLQ96GX5 879 aa15.62■□□□□ 0.09
CAPN1-204ENST00000526468 USP16Q9Y5T5 823 aa15.62■□□□□ 0.09
CAPN1-204ENST00000526468 SRGNP10124 158 aa15.61■□□□□ 0.09
CAPN1-204ENST00000526468 DCTN1Q14203 1278 aa15.61■□□□□ 0.09
CAPN1-204ENST00000526468 FAM177BA6PVY3 158 aa15.59■□□□□ 0.09
CAPN1-204ENST00000526468 CCDC93Q567U6 631 aa15.59■□□□□ 0.09
CAPN1-204ENST00000526468 NIP7Q9Y221 180 aaKnown RBP eCLIP15.59■□□□□ 0.09
CAPN1-204ENST00000526468 ABCC12Q96J65 1359 aa15.59■□□□□ 0.09
CAPN1-204ENST00000526468 TAF1P21675 1872 aa15.59■□□□□ 0.09
CAPN1-204ENST00000526468 POTECB2RU33 542 aa15.58■□□□□ 0.08
CAPN1-204ENST00000526468 CLEC4GQ6UXB4 293 aa15.58■□□□□ 0.08
CAPN1-204ENST00000526468 NBPF26B4DH59 902 aa15.57■□□□□ 0.08
CAPN1-204ENST00000526468 DDNO94850 711 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-204ENST00000526468 NEFMP07197 916 aa15.57■□□□□ 0.08
CAPN1-204ENST00000526468 NPR1P16066 1061 aa15.57■□□□□ 0.08
CAPN1-204ENST00000526468 COL13A1Q5TAT6 717 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-204ENST00000526468 NBPF10Q6P3W6 841 aaKnown RBP15.57■□□□□ 0.08
CAPN1-204ENST00000526468 NBPF15Q8N660 670 aa15.57■□□□□ 0.08
CAPN1-204ENST00000526468 LTBP1Q14766 1721 aa15.57■□□□□ 0.08
CAPN1-204ENST00000526468 HSPA1AP0DMV8 641 aaKnown RBP15.56■□□□□ 0.08
CAPN1-204ENST00000526468 HSPA1BP0DMV9 641 aaKnown RBP15.56■□□□□ 0.08
CAPN1-204ENST00000526468 CHADLQ6NUI6 762 aa15.56■□□□□ 0.08
CAPN1-204ENST00000526468 ZNF541Q9H0D2 1346 aa15.56■□□□□ 0.08
CAPN1-204ENST00000526468 IQCA1LA6NCM1 817 aa15.55■□□□□ 0.08
CAPN1-204ENST00000526468 HTATSF1O43719 755 aaKnown RBP15.55■□□□□ 0.08
CAPN1-204ENST00000526468 CAPN15O75808 1086 aa15.55■□□□□ 0.08
CAPN1-204ENST00000526468 POTEIP0CG38 1075 aa15.55■□□□□ 0.08
CAPN1-204ENST00000526468 POTEJP0CG39 1038 aa15.55■□□□□ 0.08
CAPN1-204ENST00000526468 ZNF277Q9NRM2 450 aaPredicted RBP15.55■□□□□ 0.08
CAPN1-204ENST00000526468 DDX60Q8IY21 1712 aaKnown RBP15.54■□□□□ 0.08
CAPN1-204ENST00000526468 COL4A5P29400 1685 aa15.54■□□□□ 0.08
CAPN1-204ENST00000526468 RIC1Q4ADV7 1423 aa15.54■□□□□ 0.08
CAPN1-204ENST00000526468 RGL2O15211 777 aa15.54■□□□□ 0.08
CAPN1-204ENST00000526468 GTF2E1P29083 439 aaPredicted RBP15.54■□□□□ 0.08
CAPN1-204ENST00000526468 FKBP4Q02790 459 aaKnown RBP eCLIP15.54■□□□□ 0.08
CAPN1-204ENST00000526468 OLFM4Q6UX06 510 aa15.54■□□□□ 0.08
CAPN1-204ENST00000526468 TPTE2Q6XPS3 522 aa15.54■□□□□ 0.08
CAPN1-204ENST00000526468 TNS4Q8IZW8 715 aa15.54■□□□□ 0.08
CAPN1-204ENST00000526468 MIS18AQ9NYP9 233 aa15.54■□□□□ 0.08
CAPN1-204ENST00000526468 THSD7BQ9C0I4 1608 aa15.54■□□□□ 0.08
CAPN1-204ENST00000526468 IBTKQ9P2D0 1353 aaPredicted RBP15.53■□□□□ 0.08
CAPN1-204ENST00000526468 TAF7Q15545 349 aaPredicted RBP15.53■□□□□ 0.08
CAPN1-204ENST00000526468 HLFQ16534 295 aa15.53■□□□□ 0.08
CAPN1-204ENST00000526468 KIF6Q6ZMV9 814 aa15.53■□□□□ 0.08
CAPN1-204ENST00000526468 NGEFQ8N5V2 710 aa15.53■□□□□ 0.08
CAPN1-204ENST00000526468 SNED1Q8TER0 1413 aa15.52■□□□□ 0.08
CAPN1-204ENST00000526468 MAPK8IP3Q9UPT6 1336 aa15.52■□□□□ 0.08
CAPN1-204ENST00000526468 EAPPQ56P03 285 aaPredicted RBP15.52■□□□□ 0.08
CAPN1-204ENST00000526468 LDHDQ86WU2 507 aa15.52■□□□□ 0.08
CAPN1-204ENST00000526468 C7orf43Q8WVR3 580 aa15.52■□□□□ 0.08
CAPN1-204ENST00000526468 L3MBTL3Q96JM7 780 aaPredicted RBP15.52■□□□□ 0.08
CAPN1-204ENST00000526468 CREBZFQ9NS37 354 aa15.52■□□□□ 0.08
CAPN1-204ENST00000526468 MKRN1Q9UHC7 482 aaKnown RBP15.52■□□□□ 0.08
CAPN1-204ENST00000526468 LRRC37AA6NMS7 1700 aa15.51■□□□□ 0.07
CAPN1-204ENST00000526468 NUTM1Q86Y26 1132 aa15.51■□□□□ 0.07
CAPN1-204ENST00000526468 RTKN2Q8IZC4 609 aa15.51■□□□□ 0.07
CAPN1-204ENST00000526468 PNISRQ8TF01 805 aaKnown RBP15.51■□□□□ 0.07
CAPN1-204ENST00000526468 THUMPD2Q9BTF0 503 aaKnown RBP15.51■□□□□ 0.07
CAPN1-204ENST00000526468 NYXQ9GZU5 481 aa15.51■□□□□ 0.07
CAPN1-204ENST00000526468 RNF123Q5XPI4 1314 aa15.5■□□□□ 0.07
CAPN1-204ENST00000526468 MAP3K15Q6ZN16 1313 aa15.5■□□□□ 0.07
CAPN1-204ENST00000526468 KLRG2A4D1S0 409 aaPredicted RBP15.5■□□□□ 0.07
CAPN1-204ENST00000526468 IARSP41252 1262 aaKnown RBP15.5■□□□□ 0.07
CAPN1-204ENST00000526468 TAF1DQ9H5J8 278 aaPredicted RBP15.5■□□□□ 0.07
CAPN1-204ENST00000526468 CNTNAP1P78357 1384 aa15.49■□□□□ 0.07
CAPN1-204ENST00000526468 MYL6BP14649 208 aa15.49■□□□□ 0.07
CAPN1-204ENST00000526468 GPTP24298 496 aa15.49■□□□□ 0.07
CAPN1-204ENST00000526468 NFE2L2Q16236 605 aa15.49■□□□□ 0.07
CAPN1-204ENST00000526468 RPGRQ92834 1020 aaKnown RBP15.49■□□□□ 0.07
CAPN1-204ENST00000526468 ZBTB3Q9H5J0 574 aa15.49■□□□□ 0.07
CAPN1-204ENST00000526468 HACL1Q9UJ83 578 aa15.49■□□□□ 0.07
CAPN1-204ENST00000526468 RRP7AQ9Y3A4 280 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms