RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 CD33P20138 364 aa11.22□□□□□ -0.61
COPB1-204ENST00000526191 MAP3K10Q02779 954 aa11.22□□□□□ -0.61
COPB1-204ENST00000526191 OXCT2Q9BYC2 517 aaPredicted RBP11.22□□□□□ -0.61
COPB1-204ENST00000526191 FAM157BP0CG42 384 aa11.21□□□□□ -0.61
COPB1-204ENST00000526191 BCRP11274 1271 aa11.21□□□□□ -0.61
COPB1-204ENST00000526191 SRPK2P78362 688 aaKnown RBP11.21□□□□□ -0.61
COPB1-204ENST00000526191 SAMD5Q5TGI4 173 aa11.21□□□□□ -0.61
COPB1-204ENST00000526191 FAM200AQ8TCP9 573 aa11.21□□□□□ -0.61
COPB1-204ENST00000526191 HSH2DQ96JZ2 352 aa11.21□□□□□ -0.61
COPB1-204ENST00000526191 NOVA2Q9UNW9 492 aaKnown RBP11.21□□□□□ -0.61
COPB1-204ENST00000526191 C1orf53Q5VUE5 145 aa11.2□□□□□ -0.62
COPB1-204ENST00000526191 ALDH16A1Q8IZ83 802 aa11.2□□□□□ -0.62
COPB1-204ENST00000526191 CCDC97Q96F63 343 aaPredicted RBP11.2□□□□□ -0.62
COPB1-204ENST00000526191 STRN4Q9NRL3 753 aa11.2□□□□□ -0.62
COPB1-204ENST00000526191 IGFBP4P22692 258 aa11.19□□□□□ -0.62
COPB1-204ENST00000526191 C1orf229Q6ZS94 237 aaPredicted RBP11.19□□□□□ -0.62
COPB1-204ENST00000526191 STAG2Q8N3U4 1231 aa11.19□□□□□ -0.62
COPB1-204ENST00000526191 NGLY1Q96IV0 654 aa11.19□□□□□ -0.62
COPB1-204ENST00000526191 ZMIZ1Q9ULJ6 1067 aa11.19□□□□□ -0.62
COPB1-204ENST00000526191 EFSO43281 561 aa11.18□□□□□ -0.62
COPB1-204ENST00000526191 C14orf37Q86TY3 774 aa11.18□□□□□ -0.62
COPB1-204ENST00000526191 NEUROD4Q9HD90 331 aa11.18□□□□□ -0.62
COPB1-204ENST00000526191 GPC6Q9Y625 555 aaPredicted RBP11.18□□□□□ -0.62
COPB1-204ENST00000526191 OIP5O43482 229 aa11.17□□□□□ -0.62
COPB1-204ENST00000526191 ZNF280CQ8ND82 737 aa11.17□□□□□ -0.62
COPB1-204ENST00000526191 STK32AQ8WU08 396 aa11.16□□□□□ -0.62
COPB1-204ENST00000526191 WEE1P30291 646 aa11.15□□□□□ -0.62
COPB1-204ENST00000526191 MARSP56192 900 aaKnown RBP11.15□□□□□ -0.62
COPB1-204ENST00000526191 GRIN2CQ14957 1233 aa11.15□□□□□ -0.62
COPB1-204ENST00000526191 FAM182BQ5T319 152 aa11.15□□□□□ -0.62
COPB1-204ENST00000526191 SUSD3Q96L08 255 aa11.15□□□□□ -0.62
COPB1-204ENST00000526191 ENAMQ9NRM1 1142 aa11.15□□□□□ -0.62
COPB1-204ENST00000526191 MARK1Q9P0L2 795 aa11.15□□□□□ -0.62
COPB1-204ENST00000526191 GGA1Q9UJY5 639 aa11.15□□□□□ -0.62
COPB1-204ENST00000526191 SERPINA10Q9UK55 444 aa11.15□□□□□ -0.62
COPB1-204ENST00000526191 SHISA8B8ZZ34 492 aa11.14□□□□□ -0.63
COPB1-204ENST00000526191 GOLGA6L1Q8N7Z2 621 aa11.14□□□□□ -0.63
COPB1-204ENST00000526191 NEDD1Q8NHV4 660 aa11.14□□□□□ -0.63
COPB1-204ENST00000526191 C1orf115Q9H7X2 142 aa11.14□□□□□ -0.63
COPB1-204ENST00000526191 GDF2Q9UK05 429 aaPredicted RBP11.14□□□□□ -0.63
COPB1-204ENST00000526191 NEURL1BA8MQ27 555 aa11.13□□□□□ -0.63
COPB1-204ENST00000526191 GSK3AP49840 483 aa11.13□□□□□ -0.63
COPB1-204ENST00000526191 SFSWAPQ12872 951 aaKnown RBP11.13□□□□□ -0.63
COPB1-204ENST00000526191 ELOAQ14241 798 aaKnown RBP11.13□□□□□ -0.63
COPB1-204ENST00000526191 CCDC82Q8N4S0 544 aa11.13□□□□□ -0.63
COPB1-204ENST00000526191 GALNT6Q8NCL4 622 aa11.13□□□□□ -0.63
COPB1-204ENST00000526191 KLF15Q9UIH9 416 aa11.13□□□□□ -0.63
COPB1-204ENST00000526191 ATG7O95352 703 aa11.12□□□□□ -0.63
COPB1-204ENST00000526191 ARAFP10398 606 aa11.12□□□□□ -0.63
COPB1-204ENST00000526191 LAMC2Q13753 1193 aa11.12□□□□□ -0.63
COPB1-204ENST00000526191 SLCO4C1Q6ZQN7 724 aa11.12□□□□□ -0.63
COPB1-204ENST00000526191 EDARADDQ8WWZ3 215 aa11.12□□□□□ -0.63
COPB1-204ENST00000526191 PBXIP1Q96AQ6 731 aa11.12□□□□□ -0.63
COPB1-204ENST00000526191 PRIMPOLQ96LW4 560 aa11.12□□□□□ -0.63
COPB1-204ENST00000526191 LRRC4BQ9NT99 713 aa11.12□□□□□ -0.63
COPB1-204ENST00000526191 ANKIB1Q9P2G1 1089 aa11.12□□□□□ -0.63
COPB1-204ENST00000526191 DNMT3AQ9Y6K1 912 aaPredicted RBP11.12□□□□□ -0.63
COPB1-204ENST00000526191 ACIN1Q9UKV3 1341 aaKnown RBP11.11□□□□□ -0.63
COPB1-204ENST00000526191 TYRO3Q06418 890 aa11.11□□□□□ -0.63
COPB1-204ENST00000526191 FAM69CQ0P6D2 419 aa11.11□□□□□ -0.63
COPB1-204ENST00000526191 KCNMA1Q12791 1236 aa11.11□□□□□ -0.63
COPB1-204ENST00000526191 RTN1Q16799 776 aa11.11□□□□□ -0.63
COPB1-204ENST00000526191 CEP63Q96MT8 703 aa11.11□□□□□ -0.63
COPB1-204ENST00000526191 FOXO3O43524 673 aa11.1□□□□□ -0.63
COPB1-204ENST00000526191 PCBP4P57723 403 aaKnown RBP11.1□□□□□ -0.63
COPB1-204ENST00000526191 BRD7Q9NPI1 651 aa11.1□□□□□ -0.63
COPB1-204ENST00000526191 PRR12Q9ULL5 1215 aa11.1□□□□□ -0.63
COPB1-204ENST00000526191 PRMT3O60678 531 aa11.09□□□□□ -0.63
COPB1-204ENST00000526191 TMEM164Q5U3C3 297 aa11.09□□□□□ -0.63
COPB1-204ENST00000526191 BCS1LQ9Y276 419 aa11.09□□□□□ -0.63
COPB1-204ENST00000526191 CNTNAP5Q8WYK1 1306 aa11.09□□□□□ -0.63
COPB1-204ENST00000526191 EPXP11678 715 aa11.08□□□□□ -0.64
COPB1-204ENST00000526191 IRS1P35568 1242 aa11.08□□□□□ -0.64
COPB1-204ENST00000526191 FKBP5Q13451 457 aaPredicted RBP11.08□□□□□ -0.64
COPB1-204ENST00000526191 SWI5Q1ZZU3 235 aa11.08□□□□□ -0.64
COPB1-204ENST00000526191 ZNF468Q5VIY5 522 aaPredicted RBP11.08□□□□□ -0.64
COPB1-204ENST00000526191 FCHSD1Q86WN1 690 aa11.08□□□□□ -0.64
COPB1-204ENST00000526191 SCARF2Q96GP6 870 aaPredicted RBP11.08□□□□□ -0.64
COPB1-204ENST00000526191 SLC30A3Q99726 388 aa11.08□□□□□ -0.64
COPB1-204ENST00000526191 QTRT2Q9H974 415 aaKnown RBP11.08□□□□□ -0.64
COPB1-204ENST00000526191 KLK14Q9P0G3 267 aa11.08□□□□□ -0.64
COPB1-204ENST00000526191 RNF225M0QZC1 329 aaPredicted RBP11.07□□□□□ -0.64
COPB1-204ENST00000526191 ADH6P28332 368 aa11.07□□□□□ -0.64
COPB1-204ENST00000526191 BTLAQ7Z6A9 289 aa11.07□□□□□ -0.64
COPB1-204ENST00000526191 VTI1AQ96AJ9 217 aa11.07□□□□□ -0.64
COPB1-204ENST00000526191 SNRPNP63162 240 aaKnown RBP11.06□□□□□ -0.64
COPB1-204ENST00000526191 RASSF7Q02833 373 aa11.06□□□□□ -0.64
COPB1-204ENST00000526191 OCLNQ16625 522 aa11.06□□□□□ -0.64
COPB1-204ENST00000526191 AVENQ9NQS1 362 aaPredicted RBP11.06□□□□□ -0.64
COPB1-204ENST00000526191 TGFBR3LH3BV60 316 aa11.05□□□□□ -0.64
COPB1-204ENST00000526191 DGKZQ13574 1117 aa11.05□□□□□ -0.64
COPB1-204ENST00000526191 RAB44Q7Z6P3 723 aaPredicted RBP11.05□□□□□ -0.64
COPB1-204ENST00000526191 KCNH4Q9UQ05 1017 aa11.05□□□□□ -0.64
COPB1-204ENST00000526191 KCNQ4P56696 695 aa11.04□□□□□ -0.64
COPB1-204ENST00000526191 SPEM2Q0P670 501 aa11.04□□□□□ -0.64
COPB1-204ENST00000526191 HIF1AQ16665 826 aa11.04□□□□□ -0.64
COPB1-204ENST00000526191 SYT9Q86SS6 491 aa11.04□□□□□ -0.64
COPB1-204ENST00000526191 DMGDHQ9UI17 866 aaKnown RBP11.04□□□□□ -0.64
COPB1-204ENST00000526191 HOXB4P17483 251 aaPredicted RBP11.03□□□□□ -0.64
COPB1-204ENST00000526191 AMPD1P23109 780 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms