RNA–Protein interactions for RNA: ENST00000526121.5

SYVN1-207, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 578 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-207ENST00000526121 SETDB2Q96T68 719 aa13.49□□□□□ -0.25
SYVN1-207ENST00000526121 TBC1D2BQ9UPU7 963 aa13.49□□□□□ -0.25
SYVN1-207ENST00000526121 ZNF496Q96IT1 587 aaPredicted RBP13.48□□□□□ -0.25
SYVN1-207ENST00000526121 WBP1LQ9NX94 342 aa13.48□□□□□ -0.25
SYVN1-207ENST00000526121 ADAMTSL1Q8N6G6 1762 aa13.48□□□□□ -0.25
SYVN1-207ENST00000526121 SLC34A2O95436 690 aa13.47□□□□□ -0.25
SYVN1-207ENST00000526121 ITGBL1O95965 494 aaPredicted RBP13.47□□□□□ -0.25
SYVN1-207ENST00000526121 HSPA5P11021 654 aaKnown RBP13.47□□□□□ -0.25
SYVN1-207ENST00000526121 LBX1P52954 281 aa13.47□□□□□ -0.25
SYVN1-207ENST00000526121 TEFQ10587 303 aa13.47□□□□□ -0.25
SYVN1-207ENST00000526121 CCDC93Q567U6 631 aa13.47□□□□□ -0.25
SYVN1-207ENST00000526121 EAPPQ56P03 285 aaPredicted RBP13.47□□□□□ -0.25
SYVN1-207ENST00000526121 ZNF790Q6PG37 636 aa13.47□□□□□ -0.25
SYVN1-207ENST00000526121 CAMTA2O94983 1202 aa13.46□□□□□ -0.25
SYVN1-207ENST00000526121 HACL1Q9UJ83 578 aa13.46□□□□□ -0.25
SYVN1-207ENST00000526121 RASSF10A6NK89 507 aa13.45□□□□□ -0.26
SYVN1-207ENST00000526121 DIAPH1O60610 1272 aaKnown RBP13.45□□□□□ -0.26
SYVN1-207ENST00000526121 AMER1Q5JTC6 1135 aaPredicted RBP13.45□□□□□ -0.26
SYVN1-207ENST00000526121 C7orf43Q8WVR3 580 aa13.45□□□□□ -0.26
SYVN1-207ENST00000526121 FMNL2Q96PY5 1086 aa13.45□□□□□ -0.26
SYVN1-207ENST00000526121 CLEC11AQ9Y240 323 aa13.45□□□□□ -0.26
SYVN1-207ENST00000526121 ZNF541Q9H0D2 1346 aa13.44□□□□□ -0.26
SYVN1-207ENST00000526121 EPHX2P34913 555 aa13.44□□□□□ -0.26
SYVN1-207ENST00000526121 FKBP4Q02790 459 aaKnown RBP eCLIP13.44□□□□□ -0.26
SYVN1-207ENST00000526121 DEFB115Q30KQ5 88 aa13.44□□□□□ -0.26
SYVN1-207ENST00000526121 PNMA8AQ86V59 439 aaPredicted RBP13.44□□□□□ -0.26
SYVN1-207ENST00000526121 NBPF5PQ86XG9 351 aaPredicted RBP13.44□□□□□ -0.26
SYVN1-207ENST00000526121 DZIP3Q86Y13 1208 aaKnown RBP13.44□□□□□ -0.26
SYVN1-207ENST00000526121 ABHD8Q96I13 439 aa13.44□□□□□ -0.26
SYVN1-207ENST00000526121 GNAT3A8MTJ3 354 aa13.43□□□□□ -0.26
SYVN1-207ENST00000526121 A1BGP04217 495 aa13.43□□□□□ -0.26
SYVN1-207ENST00000526121 HSPA8P11142 646 aaKnown RBP13.43□□□□□ -0.26
SYVN1-207ENST00000526121 NPR1P16066 1061 aa13.43□□□□□ -0.26
SYVN1-207ENST00000526121 MAP2K1Q02750 393 aaPredicted RBP13.43□□□□□ -0.26
SYVN1-207ENST00000526121 GAS2L2Q8NHY3 880 aa13.43□□□□□ -0.26
SYVN1-207ENST00000526121 ZNF277Q9NRM2 450 aaPredicted RBP13.43□□□□□ -0.26
SYVN1-207ENST00000526121 FAM161AQ3B820 660 aa13.42□□□□□ -0.26
SYVN1-207ENST00000526121 CLEC4GQ6UXB4 293 aa13.42□□□□□ -0.26
SYVN1-207ENST00000526121 RTKN2Q8IZC4 609 aa13.42□□□□□ -0.26
SYVN1-207ENST00000526121 CNTROBQ8N137 903 aa13.42□□□□□ -0.26
SYVN1-207ENST00000526121 IL17REQ8NFR9 667 aa13.42□□□□□ -0.26
SYVN1-207ENST00000526121 ZNF652Q9Y2D9 606 aa13.42□□□□□ -0.26
SYVN1-207ENST00000526121 THSD7BQ9C0I4 1608 aa13.42□□□□□ -0.26
SYVN1-207ENST00000526121 RNF123Q5XPI4 1314 aa13.41□□□□□ -0.26
SYVN1-207ENST00000526121 WDR33Q9C0J8 1336 aaKnown RBP13.41□□□□□ -0.26
SYVN1-207ENST00000526121 CLSPNQ9HAW4 1339 aa13.41□□□□□ -0.26
SYVN1-207ENST00000526121 KLRG2A4D1S0 409 aaPredicted RBP13.41□□□□□ -0.26
SYVN1-207ENST00000526121 MAP1SQ66K74 1059 aaPredicted RBP13.41□□□□□ -0.26
SYVN1-207ENST00000526121 ABT1Q9ULW3 272 aaKnown RBP13.41□□□□□ -0.26
SYVN1-207ENST00000526121 TRPM7Q96QT4 1865 aa13.4□□□□□ -0.26
SYVN1-207ENST00000526121 FZD9O00144 591 aa13.4□□□□□ -0.26
SYVN1-207ENST00000526121 IARSP41252 1262 aaKnown RBP13.4□□□□□ -0.26
SYVN1-207ENST00000526121 GPC2Q8N158 579 aa13.4□□□□□ -0.26
SYVN1-207ENST00000526121 BTBD11A6QL63 1104 aa13.39□□□□□ -0.27
SYVN1-207ENST00000526121 TPTE2Q6XPS3 522 aa13.39□□□□□ -0.27
SYVN1-207ENST00000526121 CEMIPQ8WUJ3 1361 aa13.39□□□□□ -0.27
SYVN1-207ENST00000526121 COL3A1P02461 1466 aaPredicted RBP13.39□□□□□ -0.27
SYVN1-207ENST00000526121 U2SURPO15042 1029 aaKnown RBP13.38□□□□□ -0.27
SYVN1-207ENST00000526121 RGL2O15211 777 aa13.38□□□□□ -0.27
SYVN1-207ENST00000526121 ALDH1B1P30837 517 aa13.38□□□□□ -0.27
SYVN1-207ENST00000526121 TRIM26Q12899 539 aaPredicted RBP13.38□□□□□ -0.27
SYVN1-207ENST00000526121 OLFM4Q6UX06 510 aa13.38□□□□□ -0.27
SYVN1-207ENST00000526121 SYNE4Q8N205 404 aa13.38□□□□□ -0.27
SYVN1-207ENST00000526121 JDP2Q8WYK2 163 aa13.38□□□□□ -0.27
SYVN1-207ENST00000526121 BEGAINQ9BUH8 593 aa13.38□□□□□ -0.27
SYVN1-207ENST00000526121 DDX21Q9NR30 783 aaKnown RBP eCLIP13.38□□□□□ -0.27
SYVN1-207ENST00000526121 KCNQ3O43525 872 aa13.37□□□□□ -0.27
SYVN1-207ENST00000526121 LMOD1P29536 600 aaPredicted RBP13.37□□□□□ -0.27
SYVN1-207ENST00000526121 ECE1P42892 770 aa13.37□□□□□ -0.27
SYVN1-207ENST00000526121 PIP4K2AP48426 406 aaPredicted RBP13.37□□□□□ -0.27
SYVN1-207ENST00000526121 PSMD1Q99460 953 aa13.37□□□□□ -0.27
SYVN1-207ENST00000526121 NIP7Q9Y221 180 aaKnown RBP eCLIP13.37□□□□□ -0.27
SYVN1-207ENST00000526121 USP16Q9Y5T5 823 aa13.37□□□□□ -0.27
SYVN1-207ENST00000526121 LTBP1Q14766 1721 aa13.36□□□□□ -0.27
SYVN1-207ENST00000526121 EIF6P56537 245 aaKnown RBP13.36□□□□□ -0.27
SYVN1-207ENST00000526121 MLLT1Q03111 559 aaPredicted RBP13.36□□□□□ -0.27
SYVN1-207ENST00000526121 PAXIP1Q6ZW49 1069 aaPredicted RBP13.36□□□□□ -0.27
SYVN1-207ENST00000526121 CAPNS2Q96L46 248 aa13.36□□□□□ -0.27
SYVN1-207ENST00000526121 SNED1Q8TER0 1413 aa13.36□□□□□ -0.27
SYVN1-207ENST00000526121 CCDC85CA6NKD9 419 aa13.35□□□□□ -0.27
SYVN1-207ENST00000526121 SNRPA1P09661 255 aaKnown RBP13.35□□□□□ -0.27
SYVN1-207ENST00000526121 GTF2E1P29083 439 aaPredicted RBP13.35□□□□□ -0.27
SYVN1-207ENST00000526121 CC2D1BQ5T0F9 858 aaKnown RBP13.35□□□□□ -0.27
SYVN1-207ENST00000526121 GJA3Q9Y6H8 435 aa13.35□□□□□ -0.27
SYVN1-207ENST00000526121 PRAMEF22A3QJZ6 481 aa13.34□□□□□ -0.27
SYVN1-207ENST00000526121 FAM177BA6PVY3 158 aa13.34□□□□□ -0.27
SYVN1-207ENST00000526121 RGS19P49795 217 aa13.34□□□□□ -0.27
SYVN1-207ENST00000526121 CC2D2BQ6DHV5 1058 aa13.34□□□□□ -0.27
SYVN1-207ENST00000526121 GPR101Q96P66 508 aaPredicted RBP13.34□□□□□ -0.27
SYVN1-207ENST00000526121 COL4A5P29400 1685 aa13.34□□□□□ -0.27
SYVN1-207ENST00000526121 LAMB4A4D0S4 1761 aa13.33□□□□□ -0.28
SYVN1-207ENST00000526121 PER1O15534 1290 aaPredicted RBP13.33□□□□□ -0.28
SYVN1-207ENST00000526121 GRM1Q13255 1194 aa13.33□□□□□ -0.28
SYVN1-207ENST00000526121 CYP4F22Q6NT55 531 aa13.33□□□□□ -0.28
SYVN1-207ENST00000526121 NUP98P52948 1817 aa13.33□□□□□ -0.28
SYVN1-207ENST00000526121 KIF7Q2M1P5 1343 aa13.33□□□□□ -0.28
SYVN1-207ENST00000526121 NBPF26B4DH59 902 aa13.32□□□□□ -0.28
SYVN1-207ENST00000526121 SCNN1DP51172 638 aa13.32□□□□□ -0.28
SYVN1-207ENST00000526121 CRY2Q49AN0 593 aa13.32□□□□□ -0.28
SYVN1-207ENST00000526121 GRIPAP1Q4V328 841 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms