RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 ADAM23O75077 832 aa9.59□□□□□ -0.87
CSDE1-210ENST00000525878 DKK1O94907 266 aa9.59□□□□□ -0.87
CSDE1-210ENST00000525878 TBCELQ5QJ74 424 aa9.59□□□□□ -0.87
CSDE1-210ENST00000525878 CCDC102BQ68D86 513 aa9.59□□□□□ -0.87
CSDE1-210ENST00000525878 MDFIQ99750 246 aa9.59□□□□□ -0.87
CSDE1-210ENST00000525878 SERTM1A2A2V5 107 aa9.58□□□□□ -0.88
CSDE1-210ENST00000525878 HIRAP54198 1017 aaPredicted RBP9.58□□□□□ -0.88
CSDE1-210ENST00000525878 SH3PXD2AQ5TCZ1 1133 aa9.58□□□□□ -0.88
CSDE1-210ENST00000525878 LARGE2Q8N3Y3 721 aa9.58□□□□□ -0.88
CSDE1-210ENST00000525878 PCBP4P57723 403 aaKnown RBP9.57□□□□□ -0.88
CSDE1-210ENST00000525878 LRRC69Q6ZNQ3 347 aa9.57□□□□□ -0.88
CSDE1-210ENST00000525878 SIX5Q8N196 739 aa9.57□□□□□ -0.88
CSDE1-210ENST00000525878 FNBP4Q8N3X1 1017 aaPredicted RBP9.57□□□□□ -0.88
CSDE1-210ENST00000525878 PSMA6P60900 246 aaKnown RBP9.56□□□□□ -0.88
CSDE1-210ENST00000525878 GRIN2CQ14957 1233 aa9.56□□□□□ -0.88
CSDE1-210ENST00000525878 C1orf53Q5VUE5 145 aa9.56□□□□□ -0.88
CSDE1-210ENST00000525878 OGFOD1Q8N543 542 aa9.56□□□□□ -0.88
CSDE1-210ENST00000525878 TSPAN10Q9H1Z9 355 aaPredicted RBP9.56□□□□□ -0.88
CSDE1-210ENST00000525878 MKRN1Q9UHC7 482 aaKnown RBP9.56□□□□□ -0.88
CSDE1-210ENST00000525878 PRR12Q9ULL5 1215 aa9.56□□□□□ -0.88
CSDE1-210ENST00000525878 ZNF232Q9UNY5 417 aa9.56□□□□□ -0.88
CSDE1-210ENST00000525878 PALM3A6NDB9 673 aaPredicted RBP9.55□□□□□ -0.88
CSDE1-210ENST00000525878 NOP53Q9NZM5 478 aaKnown RBP9.54□□□□□ -0.88
CSDE1-210ENST00000525878 ELOA3CA0A087WX78 387 aaPredicted RBP9.53□□□□□ -0.88
CSDE1-210ENST00000525878 ELOA3DA6NLF2 546 aaPredicted RBP9.53□□□□□ -0.88
CSDE1-210ENST00000525878 BAG6P46379 1132 aa9.53□□□□□ -0.88
CSDE1-210ENST00000525878 SFSWAPQ12872 951 aaKnown RBP9.53□□□□□ -0.88
CSDE1-210ENST00000525878 ELOA3BQ3SY89 546 aa9.53□□□□□ -0.88
CSDE1-210ENST00000525878 SYT9Q86SS6 491 aa9.53□□□□□ -0.88
CSDE1-210ENST00000525878 ELOA3Q8NG57 546 aa9.53□□□□□ -0.88
CSDE1-210ENST00000525878 ADARB2-AS1A8MUL3 147 aa9.52□□□□□ -0.89
CSDE1-210ENST00000525878 C21orf2O43822 256 aa9.52□□□□□ -0.89
CSDE1-210ENST00000525878 SIN3BO75182 1162 aa9.52□□□□□ -0.89
CSDE1-210ENST00000525878 RHPN1Q8TCX5 695 aa9.52□□□□□ -0.89
CSDE1-210ENST00000525878 TRIM11Q96F44 468 aa9.52□□□□□ -0.89
CSDE1-210ENST00000525878 C1QTNF9BB2RNN3 333 aa9.51□□□□□ -0.89
CSDE1-210ENST00000525878 KCNQ4P56696 695 aa9.51□□□□□ -0.89
CSDE1-210ENST00000525878 CD163Q86VB7 1156 aa9.51□□□□□ -0.89
CSDE1-210ENST00000525878 TSEN2Q8NCE0 465 aaKnown RBP9.51□□□□□ -0.89
CSDE1-210ENST00000525878 CLUAP1Q96AJ1 413 aa9.51□□□□□ -0.89
CSDE1-210ENST00000525878 SLC30A3Q99726 388 aa9.51□□□□□ -0.89
CSDE1-210ENST00000525878 SFI1A8K8P3 1242 aa9.5□□□□□ -0.89
CSDE1-210ENST00000525878 STAG2Q8N3U4 1231 aa9.5□□□□□ -0.89
CSDE1-210ENST00000525878 GLMNQ92990 594 aa9.5□□□□□ -0.89
CSDE1-210ENST00000525878 TNFRSF25Q93038 417 aa9.5□□□□□ -0.89
CSDE1-210ENST00000525878 PHACTR1Q9C0D0 580 aa9.5□□□□□ -0.89
CSDE1-210ENST00000525878 NEUROD4Q9HD90 331 aa9.5□□□□□ -0.89
CSDE1-210ENST00000525878 HCN4Q9Y3Q4 1203 aa9.5□□□□□ -0.89
CSDE1-210ENST00000525878 MAFBQ9Y5Q3 323 aaPredicted RBP9.5□□□□□ -0.89
CSDE1-210ENST00000525878 CHRNA4P43681 627 aa9.49□□□□□ -0.89
CSDE1-210ENST00000525878 TMEM132AQ24JP5 1023 aa9.49□□□□□ -0.89
CSDE1-210ENST00000525878 PROSER2Q86WR7 435 aaPredicted RBP9.49□□□□□ -0.89
CSDE1-210ENST00000525878 ZNF594Q96JF6 807 aaPredicted RBP9.49□□□□□ -0.89
CSDE1-210ENST00000525878 HSH2DQ96JZ2 352 aa9.49□□□□□ -0.89
CSDE1-210ENST00000525878 TFIP11Q9UBB9 837 aaKnown RBP9.49□□□□□ -0.89
CSDE1-210ENST00000525878 K7ELQ4 463 aaPredicted RBP9.48□□□□□ -0.89
CSDE1-210ENST00000525878 PLVAPQ9BX97 442 aa9.48□□□□□ -0.89
CSDE1-210ENST00000525878 ANKIB1Q9P2G1 1089 aa9.48□□□□□ -0.89
CSDE1-210ENST00000525878 CHMP3Q9Y3E7 222 aa9.48□□□□□ -0.89
CSDE1-210ENST00000525878 ALAS2P22557 587 aa9.47□□□□□ -0.89
CSDE1-210ENST00000525878 TYRO3Q06418 890 aa9.47□□□□□ -0.89
CSDE1-210ENST00000525878 SPEM2Q0P670 501 aa9.47□□□□□ -0.89
CSDE1-210ENST00000525878 COL9A3Q14050 684 aaPredicted RBP9.47□□□□□ -0.89
CSDE1-210ENST00000525878 ZNF280CQ8ND82 737 aa9.47□□□□□ -0.89
CSDE1-210ENST00000525878 GAS2L2Q8NHY3 880 aa9.47□□□□□ -0.89
CSDE1-210ENST00000525878 SUSD3Q96L08 255 aa9.47□□□□□ -0.89
CSDE1-210ENST00000525878 C2orf49Q9BVC5 232 aaPredicted RBP9.47□□□□□ -0.89
CSDE1-210ENST00000525878 BRD7Q9NPI1 651 aa9.47□□□□□ -0.89
CSDE1-210ENST00000525878 PRDM6Q9NQX0 595 aa9.47□□□□□ -0.89
CSDE1-210ENST00000525878 ATAD2Q6PL18 1390 aa9.47□□□□□ -0.89
CSDE1-210ENST00000525878 PPP1R12BO60237 982 aaPredicted RBP9.46□□□□□ -0.9
CSDE1-210ENST00000525878 RASA1P20936 1047 aa9.46□□□□□ -0.9
CSDE1-210ENST00000525878 STARD13Q9Y3M8 1113 aa9.46□□□□□ -0.9
CSDE1-210ENST00000525878 SEC13P55735 322 aa9.45□□□□□ -0.9
CSDE1-210ENST00000525878 ALDH16A1Q8IZ83 802 aa9.45□□□□□ -0.9
CSDE1-210ENST00000525878 CEP63Q96MT8 703 aa9.45□□□□□ -0.9
CSDE1-210ENST00000525878 FURINP09958 794 aa9.44□□□□□ -0.9
CSDE1-210ENST00000525878 SPATA31C1P0DKV0 1188 aa9.44□□□□□ -0.9
CSDE1-210ENST00000525878 KANK4Q5T7N3 995 aaPredicted RBP9.44□□□□□ -0.9
CSDE1-210ENST00000525878 KCNH4Q9UQ05 1017 aa9.44□□□□□ -0.9
CSDE1-210ENST00000525878 RBM19Q9Y4C8 960 aaKnown RBP9.44□□□□□ -0.9
CSDE1-210ENST00000525878 A6NJR5 290 aa9.43□□□□□ -0.9
CSDE1-210ENST00000525878 PTK7Q13308 1070 aa9.43□□□□□ -0.9
CSDE1-210ENST00000525878 SCG3Q8WXD2 468 aaKnown RBP9.43□□□□□ -0.9
CSDE1-210ENST00000525878 PPP1R12CQ9BZL4 782 aa9.43□□□□□ -0.9
CSDE1-210ENST00000525878 M0R082 166 aa9.42□□□□□ -0.9
CSDE1-210ENST00000525878 CRTC2Q53ET0 693 aaPredicted RBP9.42□□□□□ -0.9
CSDE1-210ENST00000525878 C20orf204Q6ZNR8 217 aa9.42□□□□□ -0.9
CSDE1-210ENST00000525878 MICALL1Q8N3F8 863 aa9.42□□□□□ -0.9
CSDE1-210ENST00000525878 ZNF417Q8TAU3 575 aa9.42□□□□□ -0.9
CSDE1-210ENST00000525878 ZNF587Q96SQ5 575 aaPredicted RBP9.42□□□□□ -0.9
CSDE1-210ENST00000525878 ALBP02768 609 aa9.41□□□□□ -0.9
CSDE1-210ENST00000525878 ADH7P40394 386 aa9.41□□□□□ -0.9
CSDE1-210ENST00000525878 NEUROD1Q13562 356 aa9.41□□□□□ -0.9
CSDE1-210ENST00000525878 BTLAQ7Z6A9 289 aa9.41□□□□□ -0.9
CSDE1-210ENST00000525878 RAB44Q7Z6P3 723 aaPredicted RBP9.41□□□□□ -0.9
CSDE1-210ENST00000525878 HIF1AQ16665 826 aa9.4□□□□□ -0.9
CSDE1-210ENST00000525878 IER5Q5VY09 327 aa9.4□□□□□ -0.9
CSDE1-210ENST00000525878 LARP1Q6PKG0 1096 aaKnown RBP9.4□□□□□ -0.9
CSDE1-210ENST00000525878 SPDYE3A6NKU9 549 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms