RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 KLK14Q9P0G3 267 aa7.65□□□□□ -1.18
CD44-220ENST00000525688 MZF1P28698 734 aaPredicted RBP7.64□□□□□ -1.19
CD44-220ENST00000525688 PLA2G4AP47712 749 aa7.64□□□□□ -1.19
CD44-220ENST00000525688 PDE3BQ13370 1112 aa7.64□□□□□ -1.19
CD44-220ENST00000525688 NBPF1Q3BBV0 1214 aa7.64□□□□□ -1.19
CD44-220ENST00000525688 KIAA1522Q9P206 1035 aaPredicted RBP7.64□□□□□ -1.19
CD44-220ENST00000525688 BMP2P12643 396 aa7.63□□□□□ -1.19
CD44-220ENST00000525688 USP5P45974 858 aa7.63□□□□□ -1.19
CD44-220ENST00000525688 FMR1Q06787 632 aaKnown RBP eCLIP7.63□□□□□ -1.19
CD44-220ENST00000525688 AAMPQ13685 434 aa7.63□□□□□ -1.19
CD44-220ENST00000525688 MRPL14Q6P1L8 145 aaKnown RBP7.63□□□□□ -1.19
CD44-220ENST00000525688 RNF217Q8TC41 542 aa7.63□□□□□ -1.19
CD44-220ENST00000525688 ALKBH8Q96BT7 664 aaKnown RBP7.63□□□□□ -1.19
CD44-220ENST00000525688 PDZRN3Q9UPQ7 1066 aa7.63□□□□□ -1.19
CD44-220ENST00000525688 BCS1LQ9Y276 419 aa7.63□□□□□ -1.19
CD44-220ENST00000525688 VAMP1P23763 118 aa7.62□□□□□ -1.19
CD44-220ENST00000525688 ZAP70P43403 619 aa7.62□□□□□ -1.19
CD44-220ENST00000525688 SMCPP49901 116 aaPredicted RBP7.62□□□□□ -1.19
CD44-220ENST00000525688 EAPPQ56P03 285 aaPredicted RBP7.62□□□□□ -1.19
CD44-220ENST00000525688 IER5Q5VY09 327 aa7.62□□□□□ -1.19
CD44-220ENST00000525688 NBPF10Q6P3W6 841 aaKnown RBP7.62□□□□□ -1.19
CD44-220ENST00000525688 ATCAYQ86WG3 371 aa7.62□□□□□ -1.19
CD44-220ENST00000525688 GJD3Q8N144 294 aa7.62□□□□□ -1.19
CD44-220ENST00000525688 MRRFQ96E11 262 aaKnown RBP7.62□□□□□ -1.19
CD44-220ENST00000525688 TGFBR3LH3BV60 316 aa7.61□□□□□ -1.19
CD44-220ENST00000525688 TATP17735 454 aaPredicted RBP7.61□□□□□ -1.19
CD44-220ENST00000525688 PLCB3Q01970 1234 aa7.61□□□□□ -1.19
CD44-220ENST00000525688 POU4F2Q12837 409 aa7.61□□□□□ -1.19
CD44-220ENST00000525688 LYSMD3Q7Z3D4 306 aa7.61□□□□□ -1.19
CD44-220ENST00000525688 TREML1Q86YW5 311 aa7.61□□□□□ -1.19
CD44-220ENST00000525688 RHPN1Q8TCX5 695 aa7.61□□□□□ -1.19
CD44-220ENST00000525688 IGSF5Q9NSI5 407 aa7.61□□□□□ -1.19
CD44-220ENST00000525688 FAM13BQ9NYF5 915 aa7.61□□□□□ -1.19
CD44-220ENST00000525688 DMGDHQ9UI17 866 aaKnown RBP7.61□□□□□ -1.19
CD44-220ENST00000525688 POLIQ9UNA4 740 aa7.61□□□□□ -1.19
CD44-220ENST00000525688 PDGFAP04085 211 aa7.6□□□□□ -1.19
CD44-220ENST00000525688 P4HBP07237 508 aaKnown RBP7.6□□□□□ -1.19
CD44-220ENST00000525688 FGD1P98174 961 aa7.6□□□□□ -1.19
CD44-220ENST00000525688 CTC1Q2NKJ3 1217 aa7.6□□□□□ -1.19
CD44-220ENST00000525688 TMC1Q8TDI8 760 aa7.6□□□□□ -1.19
CD44-220ENST00000525688 EDEM1Q92611 657 aa7.6□□□□□ -1.19
CD44-220ENST00000525688 AIDAQ96BJ3 306 aa7.6□□□□□ -1.19
CD44-220ENST00000525688 SUSD3Q96L08 255 aa7.6□□□□□ -1.19
CD44-220ENST00000525688 ANKIB1Q9P2G1 1089 aa7.6□□□□□ -1.19
CD44-220ENST00000525688 SOS2Q07890 1332 aaPredicted RBP7.59□□□□□ -1.19
CD44-220ENST00000525688 FAM187AA6NFU0 413 aa7.59□□□□□ -1.19
CD44-220ENST00000525688 TTLL8A6PVC2 850 aa7.59□□□□□ -1.19
CD44-220ENST00000525688 GPR182O15218 404 aa7.59□□□□□ -1.19
CD44-220ENST00000525688 MICAL2O94851 1124 aa7.59□□□□□ -1.19
CD44-220ENST00000525688 RPLP1P05386 114 aaKnown RBP7.59□□□□□ -1.19
CD44-220ENST00000525688 ATP4AP20648 1035 aa7.59□□□□□ -1.19
CD44-220ENST00000525688 PHKA2P46019 1235 aa7.59□□□□□ -1.19
CD44-220ENST00000525688 TAGLNQ01995 201 aaKnown RBP7.59□□□□□ -1.19
CD44-220ENST00000525688 EHHADHQ08426 723 aa7.59□□□□□ -1.19
CD44-220ENST00000525688 SCARF1Q14162 830 aa7.59□□□□□ -1.19
CD44-220ENST00000525688 C6orf118Q5T5N4 469 aa7.59□□□□□ -1.19
CD44-220ENST00000525688 PRICKLE2Q7Z3G6 844 aa7.59□□□□□ -1.19
CD44-220ENST00000525688 A0A1B0GTH6 734 aa7.58□□□□□ -1.2
CD44-220ENST00000525688 DGAT1O75907 488 aa7.58□□□□□ -1.2
CD44-220ENST00000525688 DNM1Q05193 864 aaKnown RBP7.58□□□□□ -1.2
CD44-220ENST00000525688 CRIPAKQ8N1N5 446 aa7.58□□□□□ -1.2
CD44-220ENST00000525688 OPLAHO14841 1288 aa7.57□□□□□ -1.2
CD44-220ENST00000525688 PCSK2P16519 638 aa7.57□□□□□ -1.2
CD44-220ENST00000525688 TRIM46Q7Z4K8 759 aa7.57□□□□□ -1.2
CD44-220ENST00000525688 ZNF280CQ8ND82 737 aa7.57□□□□□ -1.2
CD44-220ENST00000525688 GPR152Q8TDT2 470 aa7.57□□□□□ -1.2
CD44-220ENST00000525688 ZIC5Q96T25 663 aa7.57□□□□□ -1.2
CD44-220ENST00000525688 TIMMDC1Q9NPL8 285 aa7.57□□□□□ -1.2
CD44-220ENST00000525688 MSX1P28360 303 aa7.56□□□□□ -1.2
CD44-220ENST00000525688 INPP5BP32019 993 aa7.56□□□□□ -1.2
CD44-220ENST00000525688 PIK3R5Q8WYR1 880 aa7.56□□□□□ -1.2
CD44-220ENST00000525688 KLRG1Q96E93 195 aa7.56□□□□□ -1.2
CD44-220ENST00000525688 BCL11AQ9H165 835 aa7.56□□□□□ -1.2
CD44-220ENST00000525688 CRISPLD1Q9H336 500 aa7.56□□□□□ -1.2
CD44-220ENST00000525688 PRPF40AO75400 957 aaKnown RBP7.55□□□□□ -1.2
CD44-220ENST00000525688 XKR5Q6UX68 686 aa7.55□□□□□ -1.2
CD44-220ENST00000525688 BICDL1Q6ZP65 573 aa7.55□□□□□ -1.2
CD44-220ENST00000525688 BTLAQ7Z6A9 289 aa7.55□□□□□ -1.2
CD44-220ENST00000525688 NUDT16Q96DE0 195 aaKnown RBP7.55□□□□□ -1.2
CD44-220ENST00000525688 NIF3L1Q9GZT8 377 aa7.55□□□□□ -1.2
CD44-220ENST00000525688 GGNBP2Q9H3C7 697 aa7.55□□□□□ -1.2
CD44-220ENST00000525688 LDHBP07195 334 aaKnown RBP7.54□□□□□ -1.2
CD44-220ENST00000525688 BMP1P13497 986 aa7.54□□□□□ -1.2
CD44-220ENST00000525688 RHOQP17081 205 aa7.54□□□□□ -1.2
CD44-220ENST00000525688 IDH3AP50213 366 aa7.54□□□□□ -1.2
CD44-220ENST00000525688 ARSDP51689 593 aa7.54□□□□□ -1.2
CD44-220ENST00000525688 ENOX2Q16206 610 aaKnown RBP7.54□□□□□ -1.2
CD44-220ENST00000525688 HSH2DQ96JZ2 352 aa7.54□□□□□ -1.2
CD44-220ENST00000525688 NEUROD4Q9HD90 331 aa7.54□□□□□ -1.2
CD44-220ENST00000525688 DYRK1BQ9Y463 629 aa7.54□□□□□ -1.2
CD44-220ENST00000525688 A0A1W2PNR3 127 aa7.53□□□□□ -1.2
CD44-220ENST00000525688 FIGNL2A6NMB9 653 aa7.53□□□□□ -1.2
CD44-220ENST00000525688 NRG2O14511 850 aaPredicted RBP7.53□□□□□ -1.2
CD44-220ENST00000525688 NEFLP07196 543 aa7.53□□□□□ -1.2
CD44-220ENST00000525688 MAPK8P45983 427 aa7.53□□□□□ -1.2
CD44-220ENST00000525688 MRPL58Q14197 206 aaKnown RBP7.53□□□□□ -1.2
CD44-220ENST00000525688 ARSJQ5FYB0 599 aaPredicted RBP7.53□□□□□ -1.2
CD44-220ENST00000525688 ZFP42Q96MM3 310 aa7.53□□□□□ -1.2
CD44-220ENST00000525688 DNAJC25Q9H1X3 360 aa7.53□□□□□ -1.2
CD44-220ENST00000525688 C11orf16Q9NQ32 467 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms