RNA–Protein interactions for RNA: ENST00000525443.1

LTBP3-204, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,162 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-204ENST00000525443 C1orf115Q9H7X2 142 aa17.56■□□□□ 0.4
LTBP3-204ENST00000525443 TCHHQ07283 1943 aa17.56■□□□□ 0.4
LTBP3-204ENST00000525443 USP27XA6NNY8 438 aa17.56■□□□□ 0.4
LTBP3-204ENST00000525443 ZSCAN25Q6NSZ9 544 aa17.56■□□□□ 0.4
LTBP3-204ENST00000525443 SSH1Q8WYL5 1049 aa17.56■□□□□ 0.4
LTBP3-204ENST00000525443 DEF6Q9H4E7 631 aa17.56■□□□□ 0.4
LTBP3-204ENST00000525443 EDC4Q6P2E9 1401 aaKnown RBP17.56■□□□□ 0.4
LTBP3-204ENST00000525443 ACEP12821 1306 aa17.56■□□□□ 0.4
LTBP3-204ENST00000525443 DONSONQ9NYP3 566 aa17.55■□□□□ 0.4
LTBP3-204ENST00000525443 CWC15Q9P013 229 aaKnown RBP17.55■□□□□ 0.4
LTBP3-204ENST00000525443 FCHSD2O94868 740 aa17.55■□□□□ 0.4
LTBP3-204ENST00000525443 SATB1Q01826 763 aa17.55■□□□□ 0.4
LTBP3-204ENST00000525443 MED14O60244 1454 aa17.55■□□□□ 0.4
LTBP3-204ENST00000525443 HTATSF1O43719 755 aaKnown RBP17.54■□□□□ 0.4
LTBP3-204ENST00000525443 CPSF1Q10570 1443 aaKnown RBP17.54■□□□□ 0.4
LTBP3-204ENST00000525443 FUCA2Q9BTY2 467 aa17.54■□□□□ 0.4
LTBP3-204ENST00000525443 SUFUQ9UMX1 484 aa17.54■□□□□ 0.4
LTBP3-204ENST00000525443 TRIM35Q9UPQ4 493 aa17.54■□□□□ 0.4
LTBP3-204ENST00000525443 TECPR2O15040 1411 aa17.54■□□□□ 0.4
LTBP3-204ENST00000525443 H2AFXP16104 143 aaPredicted RBP17.54■□□□□ 0.4
LTBP3-204ENST00000525443 TPM4P67936 248 aa17.54■□□□□ 0.4
LTBP3-204ENST00000525443 CNKSR2Q8WXI2 1034 aa17.54■□□□□ 0.4
LTBP3-204ENST00000525443 TBX22Q9Y458 520 aa17.54■□□□□ 0.4
LTBP3-204ENST00000525443 CNPY2Q9Y2B0 182 aa17.54■□□□□ 0.4
LTBP3-204ENST00000525443 SETD1AO15047 1707 aaKnown RBP17.54■□□□□ 0.4
LTBP3-204ENST00000525443 UBR1Q8IWV7 1749 aa17.53■□□□□ 0.4
LTBP3-204ENST00000525443 SLU7O95391 586 aaKnown RBP17.53■□□□□ 0.4
LTBP3-204ENST00000525443 NEK4P51957 841 aa17.53■□□□□ 0.4
LTBP3-204ENST00000525443 EXOSC9Q06265 439 aaKnown RBP17.53■□□□□ 0.4
LTBP3-204ENST00000525443 NGDNQ8NEJ9 315 aaKnown RBP17.53■□□□□ 0.4
LTBP3-204ENST00000525443 CACTINQ8WUQ7 758 aaKnown RBP17.53■□□□□ 0.4
LTBP3-204ENST00000525443 IQSEC2Q5JU85 1478 aa17.53■□□□□ 0.4
LTBP3-204ENST00000525443 LRRN4CLQ8ND94 238 aa17.52■□□□□ 0.4
LTBP3-204ENST00000525443 PNPLA6Q8IY17 1366 aa17.52■□□□□ 0.4
LTBP3-204ENST00000525443 GPS2Q13227 327 aa17.52■□□□□ 0.4
LTBP3-204ENST00000525443 PTPN14Q15678 1187 aa17.52■□□□□ 0.4
LTBP3-204ENST00000525443 GRIPAP1Q4V328 841 aa17.52■□□□□ 0.4
LTBP3-204ENST00000525443 TDO2P48775 406 aa17.52■□□□□ 0.39
LTBP3-204ENST00000525443 FBXO18Q8NFZ0 1043 aa17.52■□□□□ 0.39
LTBP3-204ENST00000525443 PHACTR3Q96KR7 559 aa17.52■□□□□ 0.39
LTBP3-204ENST00000525443 LUZP1Q86V48 1076 aa17.51■□□□□ 0.39
LTBP3-204ENST00000525443 TRMT1Q9NXH9 659 aaKnown RBP17.51■□□□□ 0.39
LTBP3-204ENST00000525443 PLEKHG2Q9H7P9 1386 aa17.51■□□□□ 0.39
LTBP3-204ENST00000525443 TTC21BQ7Z4L5 1316 aa17.5■□□□□ 0.39
LTBP3-204ENST00000525443 PTPRUQ92729 1446 aa17.5■□□□□ 0.39
LTBP3-204ENST00000525443 HSP90B1P14625 803 aaKnown RBP17.5■□□□□ 0.39
LTBP3-204ENST00000525443 NOM1Q5C9Z4 860 aaKnown RBP17.5■□□□□ 0.39
LTBP3-204ENST00000525443 CCDC91Q7Z6B0 441 aa17.5■□□□□ 0.39
LTBP3-204ENST00000525443 RBM33Q96EV2 1170 aaKnown RBP17.5■□□□□ 0.39
LTBP3-204ENST00000525443 THUMPD2Q9BTF0 503 aaKnown RBP17.5■□□□□ 0.39
LTBP3-204ENST00000525443 COL3A1P02461 1466 aaPredicted RBP17.5■□□□□ 0.39
LTBP3-204ENST00000525443 KCNA6P17658 529 aa17.49■□□□□ 0.39
LTBP3-204ENST00000525443 FAM43BQ6ZT52 329 aaPredicted RBP17.49■□□□□ 0.39
LTBP3-204ENST00000525443 RAD50Q92878 1312 aa17.49■□□□□ 0.39
LTBP3-204ENST00000525443 IRF6O14896 467 aa17.49■□□□□ 0.39
LTBP3-204ENST00000525443 OAS2P29728 719 aaKnown RBP17.49■□□□□ 0.39
LTBP3-204ENST00000525443 IL13P35225 146 aa17.49■□□□□ 0.39
LTBP3-204ENST00000525443 LMAN1P49257 510 aa17.49■□□□□ 0.39
LTBP3-204ENST00000525443 GOLGA5Q8TBA6 731 aa17.49■□□□□ 0.39
LTBP3-204ENST00000525443 RNF217Q8TC41 542 aa17.48■□□□□ 0.39
LTBP3-204ENST00000525443 GCC1Q96CN9 775 aa17.48■□□□□ 0.39
LTBP3-204ENST00000525443 TRIM5Q9C035 493 aa17.48■□□□□ 0.39
LTBP3-204ENST00000525443 ANKRD65E5RJM6 399 aa17.48■□□□□ 0.39
LTBP3-204ENST00000525443 GOLIM4O00461 696 aa17.48■□□□□ 0.39
LTBP3-204ENST00000525443 SEC31AO94979 1220 aaKnown RBP17.48■□□□□ 0.39
LTBP3-204ENST00000525443 FIBPO43427 364 aa17.48■□□□□ 0.39
LTBP3-204ENST00000525443 MAGEA9P43362 315 aa17.48■□□□□ 0.39
LTBP3-204ENST00000525443 ARID5BQ14865 1188 aa17.48■□□□□ 0.39
LTBP3-204ENST00000525443 ARHGAP29Q52LW3 1261 aa17.48■□□□□ 0.39
LTBP3-204ENST00000525443 CPS1P31327 1500 aa17.48■□□□□ 0.39
LTBP3-204ENST00000525443 PLEKHG3A1L390 1219 aa17.47■□□□□ 0.39
LTBP3-204ENST00000525443 CCDC144BQ3MJ40 725 aa17.47■□□□□ 0.39
LTBP3-204ENST00000525443 INTS3Q68E01 1043 aaKnown RBP17.47■□□□□ 0.39
LTBP3-204ENST00000525443 REXO1L1PQ8IX06 675 aa17.47■□□□□ 0.39
LTBP3-204ENST00000525443 CCDC144CPQ8IYA2 1237 aa17.47■□□□□ 0.39
LTBP3-204ENST00000525443 SRCIN1Q9C0H9 1055 aa17.47■□□□□ 0.39
LTBP3-204ENST00000525443 TMCO3Q6UWJ1 677 aa17.46■□□□□ 0.39
LTBP3-204ENST00000525443 ZRANB2O95218 330 aaKnown RBP eCLIP17.46■□□□□ 0.39
LTBP3-204ENST00000525443 RNF20Q5VTR2 975 aa17.46■□□□□ 0.39
LTBP3-204ENST00000525443 NYAP1Q6ZVC0 841 aa17.46■□□□□ 0.39
LTBP3-204ENST00000525443 PLEKHM2Q8IWE5 1019 aa17.46■□□□□ 0.39
LTBP3-204ENST00000525443 SYTL4Q96C24 671 aaPredicted RBP17.46■□□□□ 0.39
LTBP3-204ENST00000525443 UBE2HP62256 183 aa17.46■□□□□ 0.39
LTBP3-204ENST00000525443 C16orf71Q8IYS4 520 aaPredicted RBP17.46■□□□□ 0.39
LTBP3-204ENST00000525443 CCDC192P0DO97 292 aa17.45■□□□□ 0.38
LTBP3-204ENST00000525443 GSCP56915 257 aaPredicted RBP17.45■□□□□ 0.38
LTBP3-204ENST00000525443 NFE2L2Q16236 605 aa17.45■□□□□ 0.38
LTBP3-204ENST00000525443 HSP90AB3PQ58FF7 597 aa17.45■□□□□ 0.38
LTBP3-204ENST00000525443 ANKLE2Q86XL3 938 aa17.45■□□□□ 0.38
LTBP3-204ENST00000525443 CCDC34Q96HJ3 373 aa17.45■□□□□ 0.38
LTBP3-204ENST00000525443 C3P01024 1663 aa17.45■□□□□ 0.38
LTBP3-204ENST00000525443 NUTM2GQ5VZR2 741 aa17.44■□□□□ 0.38
LTBP3-204ENST00000525443 FAM200AQ8TCP9 573 aa17.44■□□□□ 0.38
LTBP3-204ENST00000525443 SGSM3Q96HU1 749 aa17.44■□□□□ 0.38
LTBP3-204ENST00000525443 CCDC171Q6TFL3 1326 aa17.44■□□□□ 0.38
LTBP3-204ENST00000525443 CCDC189A1A4V9 331 aa17.44■□□□□ 0.38
LTBP3-204ENST00000525443 ELL2O00472 640 aaPredicted RBP17.44■□□□□ 0.38
LTBP3-204ENST00000525443 ZNF75DP51815 510 aa17.44■□□□□ 0.38
LTBP3-204ENST00000525443 FOXR1Q6PIV2 292 aa17.44■□□□□ 0.38
LTBP3-204ENST00000525443 C14orf37Q86TY3 774 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms