RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 LMOD3Q0VAK6 560 aa15.05■□□□□ -0
CTTN-209ENST00000525276 H0YIN7 160 aa15.04■□□□□ -0
CTTN-209ENST00000525276 CANXP27824 592 aaKnown RBP15.04■□□□□ -0
CTTN-209ENST00000525276 TAF7Q15545 349 aaPredicted RBP15.04■□□□□ -0
CTTN-209ENST00000525276 CCDC184Q52MB2 194 aa15.04■□□□□ -0
CTTN-209ENST00000525276 BICDL1Q6ZP65 573 aa15.04■□□□□ -0
CTTN-209ENST00000525276 CCDC24Q8N4L8 307 aa15.04■□□□□ -0
CTTN-209ENST00000525276 ZNF496Q96IT1 587 aaPredicted RBP15.04■□□□□ -0
CTTN-209ENST00000525276 FMNL2Q96PY5 1086 aa15.04■□□□□ -0
CTTN-209ENST00000525276 HEG1Q9ULI3 1381 aa15.03■□□□□ -0
CTTN-209ENST00000525276 C21orf2O43822 256 aa15.03■□□□□ -0
CTTN-209ENST00000525276 PRR5LQ6MZQ0 368 aa15.03■□□□□ -0
CTTN-209ENST00000525276 PNISRQ8TF01 805 aaKnown RBP15.03■□□□□ -0
CTTN-209ENST00000525276 MRS2Q9HD23 443 aa15.03■□□□□ -0
CTTN-209ENST00000525276 ARFGEF2Q9Y6D5 1785 aa15.03■□□□□ -0
CTTN-209ENST00000525276 DLG5Q8TDM6 1919 aa15.02■□□□□ -0
CTTN-209ENST00000525276 CACNA1SQ13698 1873 aa15.02■□□□□ -0
CTTN-209ENST00000525276 LTBP3Q9NS15 1303 aa15.02■□□□□ -0
CTTN-209ENST00000525276 KCNQ3O43525 872 aa15.02■□□□□ -0
CTTN-209ENST00000525276 THUMPD2Q9BTF0 503 aaKnown RBP15.02■□□□□ -0
CTTN-209ENST00000525276 BRIP1Q9BX63 1249 aa15.02■□□□□ -0
CTTN-209ENST00000525276 TEX13AQ9BXU3 409 aaPredicted RBP15.02■□□□□ -0
CTTN-209ENST00000525276 RRP7AQ9Y3A4 280 aaKnown RBP15.02■□□□□ -0
CTTN-209ENST00000525276 BCORQ6W2J9 1755 aa15.01□□□□□ -0.01
CTTN-209ENST00000525276 STARD3NLO95772 234 aa15.01□□□□□ -0.01
CTTN-209ENST00000525276 NEUROD2Q15784 382 aa15.01□□□□□ -0.01
CTTN-209ENST00000525276 ERFEQ4G0M1 354 aa15.01□□□□□ -0.01
CTTN-209ENST00000525276 CREBZFQ9NS37 354 aa15.01□□□□□ -0.01
CTTN-209ENST00000525276 ZNF219Q9P2Y4 722 aaPredicted RBP15.01□□□□□ -0.01
CTTN-209ENST00000525276 PASKQ96RG2 1323 aa15□□□□□ -0.01
CTTN-209ENST00000525276 DDNO94850 711 aaPredicted RBP15□□□□□ -0.01
CTTN-209ENST00000525276 ZNF622Q969S3 477 aaKnown RBP eCLIP15□□□□□ -0.013e-20■□□□□ 8.6
CTTN-209ENST00000525276 TBC1D2BQ9UPU7 963 aa15□□□□□ -0.01
CTTN-209ENST00000525276 CAMTA2O94983 1202 aa14.99□□□□□ -0.01
CTTN-209ENST00000525276 CHADLQ6NUI6 762 aa14.99□□□□□ -0.01
CTTN-209ENST00000525276 C7orf43Q8WVR3 580 aa14.99□□□□□ -0.01
CTTN-209ENST00000525276 MIS18AQ9NYP9 233 aa14.99□□□□□ -0.01
CTTN-209ENST00000525276 MKRN1Q9UHC7 482 aaKnown RBP14.99□□□□□ -0.01
CTTN-209ENST00000525276 CNTNAP1P78357 1384 aa14.98□□□□□ -0.01
CTTN-209ENST00000525276 ADAMTSL1Q8N6G6 1762 aa14.98□□□□□ -0.01
CTTN-209ENST00000525276 FOXN1O15353 648 aa14.98□□□□□ -0.01
CTTN-209ENST00000525276 SNRPA1P09661 255 aaKnown RBP14.98□□□□□ -0.01
CTTN-209ENST00000525276 PDE6BP35913 854 aa14.98□□□□□ -0.01
CTTN-209ENST00000525276 DPY19L2Q6NUT2 758 aa14.98□□□□□ -0.01
CTTN-209ENST00000525276 TAOK3Q9H2K8 898 aa14.98□□□□□ -0.01
CTTN-209ENST00000525276 A0A087WZG4 1122 aa14.97□□□□□ -0.01
CTTN-209ENST00000525276 APAF1O14727 1248 aa14.97□□□□□ -0.01
CTTN-209ENST00000525276 A1BGP04217 495 aa14.97□□□□□ -0.01
CTTN-209ENST00000525276 SRGNP10124 158 aa14.97□□□□□ -0.01
CTTN-209ENST00000525276 IL6STP40189 918 aaPredicted RBP14.97□□□□□ -0.01
CTTN-209ENST00000525276 PRPF40BQ6NWY9 871 aaKnown RBP14.97□□□□□ -0.01
CTTN-209ENST00000525276 BABAM1Q9NWV8 329 aa14.97□□□□□ -0.01
CTTN-209ENST00000525276 TRIM35Q9UPQ4 493 aa14.97□□□□□ -0.01
CTTN-209ENST00000525276 PDZRN3Q9UPQ7 1066 aa14.97□□□□□ -0.01
CTTN-209ENST00000525276 SCN4AP35499 1836 aa14.96□□□□□ -0.01
CTTN-209ENST00000525276 L3MBTL3Q96JM7 780 aaPredicted RBP14.96□□□□□ -0.01
CTTN-209ENST00000525276 TSPYL4Q9UJ04 414 aa14.96□□□□□ -0.01
CTTN-209ENST00000525276 ITGBL1O95965 494 aaPredicted RBP14.95□□□□□ -0.02
CTTN-209ENST00000525276 STYK1Q6J9G0 422 aa14.95□□□□□ -0.02
CTTN-209ENST00000525276 CNBD1Q8NA66 436 aa14.95□□□□□ -0.02
CTTN-209ENST00000525276 ZNF541Q9H0D2 1346 aa14.94□□□□□ -0.02
CTTN-209ENST00000525276 SNED1Q8TER0 1413 aa14.94□□□□□ -0.02
CTTN-209ENST00000525276 KDM3BQ7LBC6 1761 aa14.94□□□□□ -0.02
CTTN-209ENST00000525276 TNRC18O15417 2968 aaPredicted RBP14.94□□□□□ -0.02
CTTN-209ENST00000525276 EIF4A1P60842 406 aaKnown RBP14.94□□□□□ -0.02
CTTN-209ENST00000525276 OLFM4Q6UX06 510 aa14.94□□□□□ -0.02
CTTN-209ENST00000525276 CNKSR1Q969H4 720 aa14.94□□□□□ -0.02
CTTN-209ENST00000525276 TAF1DQ9H5J8 278 aaPredicted RBP14.94□□□□□ -0.02
CTTN-209ENST00000525276 USP16Q9Y5T5 823 aa14.94□□□□□ -0.02
CTTN-209ENST00000525276 PRAMEF22A3QJZ6 481 aa14.93□□□□□ -0.02
CTTN-209ENST00000525276 KLRG2A4D1S0 409 aaPredicted RBP14.93□□□□□ -0.02
CTTN-209ENST00000525276 VEGFBP49765 207 aa14.93□□□□□ -0.02
CTTN-209ENST00000525276 LDHDQ86WU2 507 aa14.93□□□□□ -0.02
CTTN-209ENST00000525276 MASTLQ96GX5 879 aa14.93□□□□□ -0.02
CTTN-209ENST00000525276 SETDB2Q96T68 719 aa14.93□□□□□ -0.02
CTTN-209ENST00000525276 ZNF330Q9Y3S2 320 aaPredicted RBP14.93□□□□□ -0.02
CTTN-209ENST00000525276 PIP4K2AP48426 406 aaPredicted RBP14.92□□□□□ -0.02
CTTN-209ENST00000525276 CALD1Q05682 793 aaKnown RBP14.92□□□□□ -0.02
CTTN-209ENST00000525276 NPM2Q86SE8 214 aaKnown RBP14.92□□□□□ -0.02
CTTN-209ENST00000525276 PRDM10Q9NQV6 1147 aa14.92□□□□□ -0.02
CTTN-209ENST00000525276 COL4A5P29400 1685 aa14.91□□□□□ -0.02
CTTN-209ENST00000525276 CHL1O00533 1208 aa14.91□□□□□ -0.02
CTTN-209ENST00000525276 LAS1LQ9Y4W2 734 aaKnown RBP14.91□□□□□ -0.02
CTTN-209ENST00000525276 FAM9BQ8IZU0 186 aa14.9□□□□□ -0.02
CTTN-209ENST00000525276 ZNF277Q9NRM2 450 aaPredicted RBP14.9□□□□□ -0.02
CTTN-209ENST00000525276 WBP1LQ9NX94 342 aa14.9□□□□□ -0.02
CTTN-209ENST00000525276 LTBP1Q14766 1721 aa14.89□□□□□ -0.03
CTTN-209ENST00000525276 IQCA1LA6NCM1 817 aa14.89□□□□□ -0.03
CTTN-209ENST00000525276 ST5P78524 1137 aa14.89□□□□□ -0.03
CTTN-209ENST00000525276 SOGA3Q5TF21 947 aa14.89□□□□□ -0.03
CTTN-209ENST00000525276 DZIP3Q86Y13 1208 aaKnown RBP14.89□□□□□ -0.03
CTTN-209ENST00000525276 CFAP44Q96MT7 982 aa14.89□□□□□ -0.03
CTTN-209ENST00000525276 TMEM88BA6NKF7 163 aa14.88□□□□□ -0.03
CTTN-209ENST00000525276 NBPF26B4DH59 902 aa14.88□□□□□ -0.03
CTTN-209ENST00000525276 FKBP4Q02790 459 aaKnown RBP eCLIP14.88□□□□□ -0.03
CTTN-209ENST00000525276 CCDC27Q2M243 656 aa14.88□□□□□ -0.03
CTTN-209ENST00000525276 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
CTTN-209ENST00000525276 CCDC93Q567U6 631 aa14.88□□□□□ -0.03
CTTN-209ENST00000525276 NBPF10Q6P3W6 841 aaKnown RBP14.88□□□□□ -0.03
CTTN-209ENST00000525276 NBPF15Q8N660 670 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms