RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 GSK3AP49840 483 aa10.95□□□□□ -0.66
COPB1-203ENST00000525214 SRPK2P78362 688 aaKnown RBP10.95□□□□□ -0.66
COPB1-203ENST00000525214 C1orf53Q5VUE5 145 aa10.95□□□□□ -0.66
COPB1-203ENST00000525214 LRRC69Q6ZNQ3 347 aa10.95□□□□□ -0.66
COPB1-203ENST00000525214 C1orf229Q6ZS94 237 aaPredicted RBP10.95□□□□□ -0.66
COPB1-203ENST00000525214 HINFPQ9BQA5 517 aa10.95□□□□□ -0.66
COPB1-203ENST00000525214 GJA3Q9Y6H8 435 aa10.95□□□□□ -0.66
COPB1-203ENST00000525214 OIP5O43482 229 aa10.94□□□□□ -0.66
COPB1-203ENST00000525214 CD33P20138 364 aa10.94□□□□□ -0.66
COPB1-203ENST00000525214 RHPN1Q8TCX5 695 aa10.94□□□□□ -0.66
COPB1-203ENST00000525214 STRN4Q9NRL3 753 aa10.94□□□□□ -0.66
COPB1-203ENST00000525214 CHMP3Q9Y3E7 222 aa10.94□□□□□ -0.66
COPB1-203ENST00000525214 ARID3CA6NKF2 412 aa10.93□□□□□ -0.66
COPB1-203ENST00000525214 CHMP7Q8WUX9 453 aaPredicted RBP10.93□□□□□ -0.66
COPB1-203ENST00000525214 HSH2DQ96JZ2 352 aa10.93□□□□□ -0.66
COPB1-203ENST00000525214 LRRC4BQ9NT99 713 aa10.93□□□□□ -0.66
COPB1-203ENST00000525214 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.92□□□□□ -0.66
COPB1-203ENST00000525214 IGFBP4P22692 258 aa10.92□□□□□ -0.66
COPB1-203ENST00000525214 FAM182BQ5T319 152 aa10.92□□□□□ -0.66
COPB1-203ENST00000525214 ZMIZ1Q9ULJ6 1067 aa10.92□□□□□ -0.66
COPB1-203ENST00000525214 KCNMA1Q12791 1236 aa10.91□□□□□ -0.66
COPB1-203ENST00000525214 ALDH16A1Q8IZ83 802 aa10.91□□□□□ -0.66
COPB1-203ENST00000525214 FAM200AQ8TCP9 573 aa10.91□□□□□ -0.66
COPB1-203ENST00000525214 NOVA2Q9UNW9 492 aaKnown RBP10.91□□□□□ -0.66
COPB1-203ENST00000525214 SHISA8B8ZZ34 492 aa10.9□□□□□ -0.66
COPB1-203ENST00000525214 ZNF280CQ8ND82 737 aa10.9□□□□□ -0.66
COPB1-203ENST00000525214 ENAMQ9NRM1 1142 aa10.9□□□□□ -0.66
COPB1-203ENST00000525214 GDF2Q9UK05 429 aaPredicted RBP10.9□□□□□ -0.66
COPB1-203ENST00000525214 WEE1P30291 646 aa10.89□□□□□ -0.67
COPB1-203ENST00000525214 GRIN2CQ14957 1233 aa10.89□□□□□ -0.67
COPB1-203ENST00000525214 GOLGA6L1Q8N7Z2 621 aa10.89□□□□□ -0.67
COPB1-203ENST00000525214 KLF15Q9UIH9 416 aa10.89□□□□□ -0.67
COPB1-203ENST00000525214 GGA1Q9UJY5 639 aa10.89□□□□□ -0.67
COPB1-203ENST00000525214 ARAFP10398 606 aa10.88□□□□□ -0.67
COPB1-203ENST00000525214 MARSP56192 900 aaKnown RBP10.88□□□□□ -0.67
COPB1-203ENST00000525214 LAMC2Q13753 1193 aa10.88□□□□□ -0.67
COPB1-203ENST00000525214 ELOAQ14241 798 aaKnown RBP10.88□□□□□ -0.67
COPB1-203ENST00000525214 SLCO4C1Q6ZQN7 724 aa10.88□□□□□ -0.67
COPB1-203ENST00000525214 GALNT6Q8NCL4 622 aa10.88□□□□□ -0.67
COPB1-203ENST00000525214 NGLY1Q96IV0 654 aa10.88□□□□□ -0.67
COPB1-203ENST00000525214 SUSD3Q96L08 255 aa10.88□□□□□ -0.67
COPB1-203ENST00000525214 MARK1Q9P0L2 795 aa10.88□□□□□ -0.67
COPB1-203ENST00000525214 NEDD1Q8NHV4 660 aa10.87□□□□□ -0.67
COPB1-203ENST00000525214 STK32AQ8WU08 396 aa10.87□□□□□ -0.67
COPB1-203ENST00000525214 NEUROD4Q9HD90 331 aa10.87□□□□□ -0.67
COPB1-203ENST00000525214 FAM69CQ0P6D2 419 aa10.86□□□□□ -0.67
COPB1-203ENST00000525214 SFSWAPQ12872 951 aaKnown RBP10.86□□□□□ -0.67
COPB1-203ENST00000525214 EDARADDQ8WWZ3 215 aa10.86□□□□□ -0.67
COPB1-203ENST00000525214 CCDC97Q96F63 343 aaPredicted RBP10.86□□□□□ -0.67
COPB1-203ENST00000525214 DNMT3AQ9Y6K1 912 aaPredicted RBP10.86□□□□□ -0.67
COPB1-203ENST00000525214 NEURL1BA8MQ27 555 aa10.85□□□□□ -0.67
COPB1-203ENST00000525214 ATG7O95352 703 aa10.85□□□□□ -0.67
COPB1-203ENST00000525214 TYRO3Q06418 890 aa10.85□□□□□ -0.67
COPB1-203ENST00000525214 C1orf115Q9H7X2 142 aa10.85□□□□□ -0.67
COPB1-203ENST00000525214 SERPINA10Q9UK55 444 aa10.85□□□□□ -0.67
COPB1-203ENST00000525214 CNTNAP5Q8WYK1 1306 aa10.84□□□□□ -0.67
COPB1-203ENST00000525214 RNF225M0QZC1 329 aaPredicted RBP10.84□□□□□ -0.67
COPB1-203ENST00000525214 RTN1Q16799 776 aa10.84□□□□□ -0.67
COPB1-203ENST00000525214 SCARF2Q96GP6 870 aaPredicted RBP10.84□□□□□ -0.67
COPB1-203ENST00000525214 AVENQ9NQS1 362 aaPredicted RBP10.84□□□□□ -0.67
COPB1-203ENST00000525214 ANKIB1Q9P2G1 1089 aa10.84□□□□□ -0.67
COPB1-203ENST00000525214 ACIN1Q9UKV3 1341 aaKnown RBP10.84□□□□□ -0.67
COPB1-203ENST00000525214 FOXO3O43524 673 aa10.83□□□□□ -0.68
COPB1-203ENST00000525214 EPXP11678 715 aa10.83□□□□□ -0.68
COPB1-203ENST00000525214 HOXB4P17483 251 aaPredicted RBP10.83□□□□□ -0.68
COPB1-203ENST00000525214 ADH6P28332 368 aa10.83□□□□□ -0.68
COPB1-203ENST00000525214 IRS1P35568 1242 aa10.83□□□□□ -0.68
COPB1-203ENST00000525214 RASSF7Q02833 373 aa10.83□□□□□ -0.68
COPB1-203ENST00000525214 ZNF468Q5VIY5 522 aaPredicted RBP10.83□□□□□ -0.68
COPB1-203ENST00000525214 FCHSD1Q86WN1 690 aa10.83□□□□□ -0.68
COPB1-203ENST00000525214 CEP63Q96MT8 703 aa10.83□□□□□ -0.68
COPB1-203ENST00000525214 BRD7Q9NPI1 651 aa10.83□□□□□ -0.68
COPB1-203ENST00000525214 BCS1LQ9Y276 419 aa10.83□□□□□ -0.68
COPB1-203ENST00000525214 PCBP4P57723 403 aaKnown RBP10.82□□□□□ -0.68
COPB1-203ENST00000525214 SNRPNP63162 240 aaKnown RBP10.82□□□□□ -0.68
COPB1-203ENST00000525214 SWI5Q1ZZU3 235 aa10.82□□□□□ -0.68
COPB1-203ENST00000525214 PBXIP1Q96AQ6 731 aa10.82□□□□□ -0.68
COPB1-203ENST00000525214 SLC30A3Q99726 388 aa10.82□□□□□ -0.68
COPB1-203ENST00000525214 QTRT2Q9H974 415 aaKnown RBP10.82□□□□□ -0.68
COPB1-203ENST00000525214 FKBP5Q13451 457 aaPredicted RBP10.81□□□□□ -0.68
COPB1-203ENST00000525214 OCLNQ16625 522 aa10.81□□□□□ -0.68
COPB1-203ENST00000525214 BTLAQ7Z6A9 289 aa10.81□□□□□ -0.68
COPB1-203ENST00000525214 C14orf37Q86TY3 774 aa10.81□□□□□ -0.68
COPB1-203ENST00000525214 PRIMPOLQ96LW4 560 aa10.81□□□□□ -0.68
COPB1-203ENST00000525214 KCNQ4P56696 695 aa10.8□□□□□ -0.68
COPB1-203ENST00000525214 TMEM164Q5U3C3 297 aa10.8□□□□□ -0.68
COPB1-203ENST00000525214 CCDC82Q8N4S0 544 aa10.8□□□□□ -0.68
COPB1-203ENST00000525214 DMGDHQ9UI17 866 aaKnown RBP10.8□□□□□ -0.68
COPB1-203ENST00000525214 PRR12Q9ULL5 1215 aa10.8□□□□□ -0.68
COPB1-203ENST00000525214 TGFBR3LH3BV60 316 aa10.79□□□□□ -0.68
COPB1-203ENST00000525214 PRMT3O60678 531 aa10.79□□□□□ -0.68
COPB1-203ENST00000525214 IER5Q5VY09 327 aa10.79□□□□□ -0.68
COPB1-203ENST00000525214 SYT9Q86SS6 491 aa10.79□□□□□ -0.68
COPB1-203ENST00000525214 BTBD6Q96KE9 485 aa10.79□□□□□ -0.68
COPB1-203ENST00000525214 MDFIQ99750 246 aa10.79□□□□□ -0.68
COPB1-203ENST00000525214 KLK14Q9P0G3 267 aa10.79□□□□□ -0.68
COPB1-203ENST00000525214 GDF11O95390 407 aa10.78□□□□□ -0.68
COPB1-203ENST00000525214 SPEM2Q0P670 501 aa10.78□□□□□ -0.68
COPB1-203ENST00000525214 HIF1AQ16665 826 aa10.78□□□□□ -0.68
COPB1-203ENST00000525214 TMEM151AQ8N4L1 468 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms