RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 SLKQ9H2G2 1235 aaPredicted RBP5.83□□□□□ -1.48
CD44-213ENST00000525209 THRAP3Q9Y2W1 955 aaKnown RBP5.83□□□□□ -1.48
CD44-213ENST00000525209 V9GY48 417 aaPredicted RBP5.83□□□□□ -1.48
CD44-213ENST00000525209 KIF3BO15066 747 aa5.82□□□□□ -1.48
CD44-213ENST00000525209 NR1I2O75469 434 aa5.82□□□□□ -1.48
CD44-213ENST00000525209 ATF4P18848 351 aaPredicted RBP5.82□□□□□ -1.48
CD44-213ENST00000525209 CLDN10P78369 228 aa5.82□□□□□ -1.48
CD44-213ENST00000525209 PLCB3Q01970 1234 aa5.82□□□□□ -1.48
CD44-213ENST00000525209 FUT2Q10981 343 aa5.82□□□□□ -1.48
CD44-213ENST00000525209 ENOX2Q16206 610 aaKnown RBP5.82□□□□□ -1.48
CD44-213ENST00000525209 ZNF394Q53GI3 561 aa5.82□□□□□ -1.48
CD44-213ENST00000525209 PCGF5Q86SE9 256 aa5.82□□□□□ -1.48
CD44-213ENST00000525209 FERMT3Q86UX7 667 aa5.82□□□□□ -1.48
CD44-213ENST00000525209 SLC39A13Q96H72 371 aa5.82□□□□□ -1.48
CD44-213ENST00000525209 ZNF594Q96JF6 807 aaPredicted RBP5.82□□□□□ -1.48
CD44-213ENST00000525209 APBA2Q99767 749 aa5.82□□□□□ -1.48
CD44-213ENST00000525209 EID1Q9Y6B2 187 aa5.82□□□□□ -1.48
CD44-213ENST00000525209 ZBBXA8MT70 800 aa5.81□□□□□ -1.48
CD44-213ENST00000525209 TNFRSF10BO14763 440 aa5.81□□□□□ -1.48
CD44-213ENST00000525209 ADH1BP00325 375 aa5.81□□□□□ -1.48
CD44-213ENST00000525209 NPR3P17342 541 aa5.81□□□□□ -1.48
CD44-213ENST00000525209 MAPK8P45983 427 aa5.81□□□□□ -1.48
CD44-213ENST00000525209 GJA8P48165 433 aa5.81□□□□□ -1.48
CD44-213ENST00000525209 CBLBQ13191 982 aa5.81□□□□□ -1.48
CD44-213ENST00000525209 SAFB2Q14151 953 aaKnown RBP eCLIP5.81□□□□□ -1.48
CD44-213ENST00000525209 SRA1Q9HD15 236 aaKnown RBP5.81□□□□□ -1.48
CD44-213ENST00000525209 CYLDQ9NQC7 956 aa5.81□□□□□ -1.48
CD44-213ENST00000525209 DNAAF2Q9NVR5 837 aaKnown RBP5.81□□□□□ -1.48
CD44-213ENST00000525209 SFMBT1Q9UHJ3 866 aa5.81□□□□□ -1.48
CD44-213ENST00000525209 PCDHGB7Q9Y5F8 929 aa5.81□□□□□ -1.48
CD44-213ENST00000525209 LDHAP00338 332 aaKnown RBP5.8□□□□□ -1.48
CD44-213ENST00000525209 NEFMP07197 916 aa5.8□□□□□ -1.48
CD44-213ENST00000525209 GNALP38405 381 aa5.8□□□□□ -1.48
CD44-213ENST00000525209 SLC19A1P41440 591 aa5.8□□□□□ -1.48
CD44-213ENST00000525209 ATP1A2P50993 1020 aa5.8□□□□□ -1.48
CD44-213ENST00000525209 EHHADHQ08426 723 aa5.8□□□□□ -1.48
CD44-213ENST00000525209 KCNH2Q12809 1159 aa5.8□□□□□ -1.48
CD44-213ENST00000525209 VPS72Q15906 364 aa5.8□□□□□ -1.48
CD44-213ENST00000525209 ARSHQ5FYA8 562 aa5.8□□□□□ -1.48
CD44-213ENST00000525209 PLA2G2CQ5R387 149 aa5.8□□□□□ -1.48
CD44-213ENST00000525209 TRIM50Q86XT4 487 aa5.8□□□□□ -1.48
CD44-213ENST00000525209 SIX5Q8N196 739 aa5.8□□□□□ -1.48
CD44-213ENST00000525209 PHTF2Q8N3S3 785 aa5.8□□□□□ -1.48
CD44-213ENST00000525209 ZNF512BQ96KM6 892 aaPredicted RBP5.8□□□□□ -1.48
CD44-213ENST00000525209 CITED4Q96RK1 184 aa5.8□□□□□ -1.48
CD44-213ENST00000525209 CEP89Q96ST8 783 aa5.8□□□□□ -1.48
CD44-213ENST00000525209 NAP1L4Q99733 375 aaKnown RBP5.8□□□□□ -1.48
CD44-213ENST00000525209 SLC6A16Q9GZN6 736 aa5.8□□□□□ -1.48
CD44-213ENST00000525209 C12orf49Q9H741 205 aa5.8□□□□□ -1.48
CD44-213ENST00000525209 PDZRN3Q9UPQ7 1066 aa5.8□□□□□ -1.48
CD44-213ENST00000525209 CFAP69A5D8W1 941 aa5.79□□□□□ -1.48
CD44-213ENST00000525209 IFRD1O00458 451 aaPredicted RBP5.79□□□□□ -1.48
CD44-213ENST00000525209 NDUFB5O43674 189 aa5.79□□□□□ -1.48
CD44-213ENST00000525209 PLIN1O60240 522 aa5.79□□□□□ -1.48
CD44-213ENST00000525209 ZNF500O60304 480 aaPredicted RBP5.79□□□□□ -1.48
CD44-213ENST00000525209 CDC45O75419 566 aa5.79□□□□□ -1.48
CD44-213ENST00000525209 FAM13AO94988 1023 aa5.79□□□□□ -1.48
CD44-213ENST00000525209 HSP90AA1P07900 732 aaKnown RBP5.79□□□□□ -1.48
CD44-213ENST00000525209 GCGRP47871 477 aa5.79□□□□□ -1.48
CD44-213ENST00000525209 SEC13P55735 322 aa5.79□□□□□ -1.48
CD44-213ENST00000525209 HDAC1Q13547 482 aaPredicted RBP5.79□□□□□ -1.48
CD44-213ENST00000525209 EML3Q32P44 896 aa5.79□□□□□ -1.48
CD44-213ENST00000525209 MORN1Q5T089 497 aa5.79□□□□□ -1.48
CD44-213ENST00000525209 ZNF280DQ6N043 979 aa5.79□□□□□ -1.48
CD44-213ENST00000525209 LIAT1Q6ZQX7 453 aa5.79□□□□□ -1.48
CD44-213ENST00000525209 USP48Q86UV5 1035 aa5.79□□□□□ -1.48
CD44-213ENST00000525209 SAMD3Q8N6K7 520 aa5.79□□□□□ -1.48
CD44-213ENST00000525209 PLPP7Q8NBV4 271 aa5.79□□□□□ -1.48
CD44-213ENST00000525209 SRPK1Q96SB4 655 aaKnown RBP5.79□□□□□ -1.48
CD44-213ENST00000525209 SPSB2Q99619 263 aa5.79□□□□□ -1.48
CD44-213ENST00000525209 HOMER2Q9NSB8 354 aa5.79□□□□□ -1.48
CD44-213ENST00000525209 SIRPGQ9P1W8 387 aa5.79□□□□□ -1.48
CD44-213ENST00000525209 SLC27A5Q9Y2P5 690 aa5.79□□□□□ -1.48
CD44-213ENST00000525209 ZBTB7BO15156 539 aaPredicted RBP5.78□□□□□ -1.48
CD44-213ENST00000525209 PTCD1O75127 700 aaKnown RBP5.78□□□□□ -1.48
CD44-213ENST00000525209 CAND2O75155 1236 aa5.78□□□□□ -1.48
CD44-213ENST00000525209 FGAP02671 866 aa5.78□□□□□ -1.48
CD44-213ENST00000525209 CD53P19397 219 aa5.78□□□□□ -1.48
CD44-213ENST00000525209 NOS2P35228 1153 aa5.78□□□□□ -1.48
CD44-213ENST00000525209 ATP2B2Q01814 1243 aa5.78□□□□□ -1.48
CD44-213ENST00000525209 GUCA2AQ02747 115 aa5.78□□□□□ -1.48
CD44-213ENST00000525209 PTPN12Q05209 780 aaKnown RBP5.78□□□□□ -1.48
CD44-213ENST00000525209 POU5F1BQ06416 359 aa5.78□□□□□ -1.48
CD44-213ENST00000525209 ZRSR2Q15696 482 aaKnown RBP5.78□□□□□ -1.48
CD44-213ENST00000525209 TRIM67Q6ZTA4 783 aa5.78□□□□□ -1.48
CD44-213ENST00000525209 KIAA0907Q7Z7F0 614 aaPredicted RBP5.78□□□□□ -1.48
CD44-213ENST00000525209 ANKLE1Q8NAG6 615 aa5.78□□□□□ -1.48
CD44-213ENST00000525209 HELQQ8TDG4 1101 aa5.78□□□□□ -1.48
CD44-213ENST00000525209 TSR2Q969E8 191 aaKnown RBP5.78□□□□□ -1.48
CD44-213ENST00000525209 AVENQ9NQS1 362 aaPredicted RBP5.78□□□□□ -1.48
CD44-213ENST00000525209 PRDM9Q9NQV7 894 aa5.78□□□□□ -1.48
CD44-213ENST00000525209 FANCLQ9NW38 375 aa5.78□□□□□ -1.48
CD44-213ENST00000525209 MAP3K20Q9NYL2 800 aaKnown RBP5.78□□□□□ -1.48
CD44-213ENST00000525209 CEP126Q9P2H0 1117 aa5.78□□□□□ -1.48
CD44-213ENST00000525209 NRBP1Q9UHY1 535 aa5.78□□□□□ -1.48
CD44-213ENST00000525209 CHIC2Q9UKJ5 165 aa5.78□□□□□ -1.48
CD44-213ENST00000525209 NOD1Q9Y239 953 aa5.78□□□□□ -1.48
CD44-213ENST00000525209 NRG2O14511 850 aaPredicted RBP5.77□□□□□ -1.49
CD44-213ENST00000525209 IGHA2P01877 340 aa5.77□□□□□ -1.49
CD44-213ENST00000525209 MAN1A1P33908 653 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms