RNA–Protein interactions for RNA: ENST00000524817.5

SWAP70-203, Transcript of switching B cell complex subunit SWAP70, humanhuman

TSL 1 (best)

Gene SWAP70, Length 3,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWAP70-203ENST00000524817 NUP188Q5SRE5 1749 aa16.76■□□□□ 0.27
SWAP70-203ENST00000524817 IL6STP40189 918 aaPredicted RBP16.76■□□□□ 0.27
SWAP70-203ENST00000524817 RIC3Q7Z5B4 369 aa16.76■□□□□ 0.27
SWAP70-203ENST00000524817 KLHL34Q8N239 644 aa16.76■□□□□ 0.27
SWAP70-203ENST00000524817 RC3H1Q5TC82 1133 aaKnown RBP16.75■□□□□ 0.27
SWAP70-203ENST00000524817 PPP1R1BQ9UD71 204 aaPredicted RBP16.75■□□□□ 0.27
SWAP70-203ENST00000524817 SUPT16HQ9Y5B9 1047 aaKnown RBP16.75■□□□□ 0.27
SWAP70-203ENST00000524817 MAP3K2Q9Y2U5 619 aa16.75■□□□□ 0.27
SWAP70-203ENST00000524817 COL5A3P25940 1745 aaPredicted RBP16.74■□□□□ 0.27
SWAP70-203ENST00000524817 HOXB7P09629 217 aa16.74■□□□□ 0.27
SWAP70-203ENST00000524817 ANKRD13DQ6ZTN6 518 aa16.74■□□□□ 0.27
SWAP70-203ENST00000524817 CWF19L2Q2TBE0 894 aaKnown RBP16.74■□□□□ 0.27
SWAP70-203ENST00000524817 BCL2L12Q9HB09 334 aa16.74■□□□□ 0.27
SWAP70-203ENST00000524817 SYNE4Q8N205 404 aa16.73■□□□□ 0.27
SWAP70-203ENST00000524817 HYPKQ9NX55 129 aa16.73■□□□□ 0.27
SWAP70-203ENST00000524817 C20orf194Q5TEA3 1177 aa16.73■□□□□ 0.27
SWAP70-203ENST00000524817 TBC1D9BQ66K14 1250 aa16.73■□□□□ 0.27
SWAP70-203ENST00000524817 KIF6Q6ZMV9 814 aa16.73■□□□□ 0.27
SWAP70-203ENST00000524817 MYD88Q99836 296 aa16.73■□□□□ 0.27
SWAP70-203ENST00000524817 CAMTA2O94983 1202 aa16.72■□□□□ 0.27
SWAP70-203ENST00000524817 GYS1P13807 737 aa16.72■□□□□ 0.27
SWAP70-203ENST00000524817 SSFA2P28290 1259 aa16.72■□□□□ 0.27
SWAP70-203ENST00000524817 TUBGCP6Q96RT7 1819 aa16.72■□□□□ 0.27
SWAP70-203ENST00000524817 RREB1Q92766 1687 aa16.72■□□□□ 0.27
SWAP70-203ENST00000524817 UBR3Q6ZT12 1888 aa16.71■□□□□ 0.27
SWAP70-203ENST00000524817 PANK1Q8TE04 598 aa16.71■□□□□ 0.27
SWAP70-203ENST00000524817 USP42Q9H9J4 1324 aaKnown RBP16.71■□□□□ 0.26
SWAP70-203ENST00000524817 NUTM1Q86Y26 1132 aa16.7■□□□□ 0.26
SWAP70-203ENST00000524817 NARFQ9UHQ1 456 aa16.7■□□□□ 0.26
SWAP70-203ENST00000524817 NIP7Q9Y221 180 aaKnown RBP eCLIP16.7■□□□□ 0.26
SWAP70-203ENST00000524817 NPHP1O15259 732 aa16.7■□□□□ 0.26
SWAP70-203ENST00000524817 MAP3K15Q6ZN16 1313 aa16.69■□□□□ 0.26
SWAP70-203ENST00000524817 MMP10P09238 476 aa16.69■□□□□ 0.26
SWAP70-203ENST00000524817 RLBP1P12271 317 aa16.69■□□□□ 0.26
SWAP70-203ENST00000524817 LAMB4A4D0S4 1761 aa16.69■□□□□ 0.26
SWAP70-203ENST00000524817 TRIM27P14373 513 aa16.69■□□□□ 0.26
SWAP70-203ENST00000524817 ADCY9O60503 1353 aa16.68■□□□□ 0.26
SWAP70-203ENST00000524817 NFIXQ14938 502 aa16.68■□□□□ 0.26
SWAP70-203ENST00000524817 CCDC85AQ96PX6 553 aaPredicted RBP16.67■□□□□ 0.26
SWAP70-203ENST00000524817 ALDH1L2Q3SY69 923 aa16.67■□□□□ 0.26
SWAP70-203ENST00000524817 KSR2Q6VAB6 950 aa16.67■□□□□ 0.26
SWAP70-203ENST00000524817 PLBD2Q8NHP8 589 aa16.67■□□□□ 0.26
SWAP70-203ENST00000524817 DNAAF4Q8WXU2 420 aa16.67■□□□□ 0.26
SWAP70-203ENST00000524817 UBN2Q6ZU65 1347 aa16.67■□□□□ 0.26
SWAP70-203ENST00000524817 DDR1Q08345 913 aa16.66■□□□□ 0.26
SWAP70-203ENST00000524817 FAM89AQ96GI7 184 aa16.66■□□□□ 0.26
SWAP70-203ENST00000524817 IGKV5-2P06315 115 aa16.66■□□□□ 0.26
SWAP70-203ENST00000524817 GIGYF2Q6Y7W6 1299 aaKnown RBP16.66■□□□□ 0.26
SWAP70-203ENST00000524817 ERBB4Q15303 1308 aa16.65■□□□□ 0.26
SWAP70-203ENST00000524817 DDX58O95786 925 aaKnown RBP16.65■□□□□ 0.26
SWAP70-203ENST00000524817 RGPD3A6NKT7 1758 aaPredicted RBP16.65■□□□□ 0.26
SWAP70-203ENST00000524817 RGPD4Q7Z3J3 1758 aa16.65■□□□□ 0.26
SWAP70-203ENST00000524817 SUSD4Q5VX71 490 aa16.65■□□□□ 0.26
SWAP70-203ENST00000524817 SETDB2Q96T68 719 aa16.65■□□□□ 0.26
SWAP70-203ENST00000524817 COG6Q9Y2V7 657 aa16.65■□□□□ 0.26
SWAP70-203ENST00000524817 C4AP0C0L4 1744 aa16.65■□□□□ 0.26
SWAP70-203ENST00000524817 A0A087WZG4 1122 aa16.64■□□□□ 0.26
SWAP70-203ENST00000524817 GTF2E1P29083 439 aaPredicted RBP16.64■□□□□ 0.26
SWAP70-203ENST00000524817 ADRA2BP18089 450 aa16.64■□□□□ 0.25
SWAP70-203ENST00000524817 ATF7IPQ6VMQ6 1270 aa16.64■□□□□ 0.25
SWAP70-203ENST00000524817 FTSJ3Q8IY81 847 aaKnown RBP16.64■□□□□ 0.25
SWAP70-203ENST00000524817 ZKSCAN2Q63HK3 967 aa16.64■□□□□ 0.25
SWAP70-203ENST00000524817 TMEM57Q8N5G2 664 aa16.64■□□□□ 0.25
SWAP70-203ENST00000524817 CT47B1P0C2W7 299 aaPredicted RBP16.63■□□□□ 0.25
SWAP70-203ENST00000524817 TCIRG1Q13488 830 aa16.63■□□□□ 0.25
SWAP70-203ENST00000524817 FLAD1Q8NFF5 587 aa16.63■□□□□ 0.25
SWAP70-203ENST00000524817 HCLS1P14317 486 aaPredicted RBP16.63■□□□□ 0.25
SWAP70-203ENST00000524817 METTL22Q9BUU2 404 aaPredicted RBP16.63■□□□□ 0.25
SWAP70-203ENST00000524817 NBPF5PQ86XG9 351 aaPredicted RBP16.62■□□□□ 0.25
SWAP70-203ENST00000524817 ITPRIPQ8IWB1 547 aa16.62■□□□□ 0.25
SWAP70-203ENST00000524817 TRMT112Q9UI30 125 aaKnown RBP16.62■□□□□ 0.25
SWAP70-203ENST00000524817 SERPINB2P05120 415 aa16.62■□□□□ 0.25
SWAP70-203ENST00000524817 BCL11AQ9H165 835 aa16.62■□□□□ 0.25
SWAP70-203ENST00000524817 C1orf115Q9H7X2 142 aa16.62■□□□□ 0.25
SWAP70-203ENST00000524817 ZNF831Q5JPB2 1677 aa16.62■□□□□ 0.25
SWAP70-203ENST00000524817 NEXNQ0ZGT2 675 aa16.62■□□□□ 0.25
SWAP70-203ENST00000524817 NLGN1Q8N2Q7 840 aa16.62■□□□□ 0.25
SWAP70-203ENST00000524817 UBE3BQ7Z3V4 1068 aa16.61■□□□□ 0.25
SWAP70-203ENST00000524817 NLRP10Q86W26 655 aa16.61■□□□□ 0.25
SWAP70-203ENST00000524817 ZNF652Q9Y2D9 606 aa16.61■□□□□ 0.25
SWAP70-203ENST00000524817 NUP98P52948 1817 aa16.61■□□□□ 0.25
SWAP70-203ENST00000524817 BEND3Q5T5X7 828 aa16.61■□□□□ 0.25
SWAP70-203ENST00000524817 MTFR1LQ9H019 292 aa16.61■□□□□ 0.25
SWAP70-203ENST00000524817 KIF16BQ96L93 1317 aa16.6■□□□□ 0.25
SWAP70-203ENST00000524817 CENPBP07199 599 aaPredicted RBP16.6■□□□□ 0.25
SWAP70-203ENST00000524817 NBPF7P0C2Y1 421 aaPredicted RBP16.6■□□□□ 0.25
SWAP70-203ENST00000524817 ERFEQ4G0M1 354 aa16.6■□□□□ 0.25
SWAP70-203ENST00000524817 NEURL1BA8MQ27 555 aa16.6■□□□□ 0.25
SWAP70-203ENST00000524817 ERVV-1B6SEH8 477 aa16.6■□□□□ 0.25
SWAP70-203ENST00000524817 RRP1P56182 461 aaKnown RBP16.6■□□□□ 0.25
SWAP70-203ENST00000524817 DZIP1LQ8IYY4 767 aaKnown RBP16.6■□□□□ 0.25
SWAP70-203ENST00000524817 CHMP4AQ9BY43 222 aa16.6■□□□□ 0.25
SWAP70-203ENST00000524817 PARP3Q9Y6F1 533 aa16.6■□□□□ 0.25
SWAP70-203ENST00000524817 POLRMTO00411 1230 aaKnown RBP16.59■□□□□ 0.25
SWAP70-203ENST00000524817 TM4SF1P30408 202 aa16.59■□□□□ 0.25
SWAP70-203ENST00000524817 SLC51AQ86UW1 340 aa16.59■□□□□ 0.25
SWAP70-203ENST00000524817 ZNF34Q8IZ26 560 aa16.59■□□□□ 0.25
SWAP70-203ENST00000524817 SRCIN1Q9C0H9 1055 aa16.59■□□□□ 0.25
SWAP70-203ENST00000524817 CARMIL3Q8ND23 1372 aa16.59■□□□□ 0.25
SWAP70-203ENST00000524817 IPO8O15397 1037 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms