RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 FAM184AQ8NB25 1140 aa15.77■□□□□ 0.11
CAPN1-202ENST00000524773 C16orf45Q96MC5 204 aaPredicted RBP15.77■□□□□ 0.11
CAPN1-202ENST00000524773 SLC26A8Q96RN1 970 aa15.77■□□□□ 0.11
CAPN1-202ENST00000524773 ADAMTS13Q76LX8 1427 aa15.76■□□□□ 0.11
CAPN1-202ENST00000524773 IL17REQ8NFR9 667 aa15.76■□□□□ 0.11
CAPN1-202ENST00000524773 SIRT1Q96EB6 747 aa15.76■□□□□ 0.11
CAPN1-202ENST00000524773 FUCA2Q9BTY2 467 aa15.76■□□□□ 0.11
CAPN1-202ENST00000524773 HYPKQ9NX55 129 aa15.76■□□□□ 0.11
CAPN1-202ENST00000524773 ME3Q16798 604 aa15.76■□□□□ 0.11
CAPN1-202ENST00000524773 HDGFL1Q5TGJ6 251 aa15.76■□□□□ 0.11
CAPN1-202ENST00000524773 KIAA1524Q8TCG1 905 aa15.76■□□□□ 0.11
CAPN1-202ENST00000524773 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.76■□□□□ 0.11
CAPN1-202ENST00000524773 FOSBP53539 338 aa15.75■□□□□ 0.11
CAPN1-202ENST00000524773 CDC37L1Q7L3B6 337 aa15.75■□□□□ 0.11
CAPN1-202ENST00000524773 DRC7Q8IY82 874 aa15.75■□□□□ 0.11
CAPN1-202ENST00000524773 PDRG1Q9NUG6 133 aa15.75■□□□□ 0.11
CAPN1-202ENST00000524773 KCNQ3O43525 872 aa15.75■□□□□ 0.11
CAPN1-202ENST00000524773 TAF7Q15545 349 aaPredicted RBP15.75■□□□□ 0.11
CAPN1-202ENST00000524773 UVSSAQ2YD98 709 aa15.75■□□□□ 0.11
CAPN1-202ENST00000524773 TTC6Q86TZ1 520 aa15.75■□□□□ 0.11
CAPN1-202ENST00000524773 PRIMPOLQ96LW4 560 aa15.75■□□□□ 0.11
CAPN1-202ENST00000524773 TECPR2O15040 1411 aa15.75■□□□□ 0.11
CAPN1-202ENST00000524773 CCDC186Q7Z3E2 898 aa15.74■□□□□ 0.11
CAPN1-202ENST00000524773 MTERF4Q7Z6M4 381 aaKnown RBP15.74■□□□□ 0.11
CAPN1-202ENST00000524773 PDCL2Q8N4E4 241 aa15.74■□□□□ 0.11
CAPN1-202ENST00000524773 DIAPH3Q9NSV4 1193 aa15.74■□□□□ 0.11
CAPN1-202ENST00000524773 HMGN5P82970 282 aaKnown RBP15.74■□□□□ 0.11
CAPN1-202ENST00000524773 TMEM87AQ8NBN3 555 aa15.74■□□□□ 0.11
CAPN1-202ENST00000524773 FAM227BQ96M60 508 aa15.74■□□□□ 0.11
CAPN1-202ENST00000524773 ROBO2Q9HCK4 1378 aa15.74■□□□□ 0.11
CAPN1-202ENST00000524773 SPTLC3Q9NUV7 552 aa15.74■□□□□ 0.11
CAPN1-202ENST00000524773 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-202ENST00000524773 KCNJ4P48050 445 aa15.73■□□□□ 0.11
CAPN1-202ENST00000524773 TPCN1Q9ULQ1 816 aa15.73■□□□□ 0.11
CAPN1-202ENST00000524773 PI4KAP2A4QPH2 592 aa15.73■□□□□ 0.11
CAPN1-202ENST00000524773 CEBPZQ03701 1054 aaKnown RBP15.73■□□□□ 0.11
CAPN1-202ENST00000524773 DMTNQ08495 405 aa15.73■□□□□ 0.11
CAPN1-202ENST00000524773 CNTROBQ8N137 903 aa15.73■□□□□ 0.11
CAPN1-202ENST00000524773 PI4KAP1Q8N8J0 262 aa15.73■□□□□ 0.11
CAPN1-202ENST00000524773 SSH3Q8TE77 659 aa15.73■□□□□ 0.11
CAPN1-202ENST00000524773 FBXW7Q969H0 707 aa15.73■□□□□ 0.11
CAPN1-202ENST00000524773 DDX11Q96FC9 970 aa15.73■□□□□ 0.11
CAPN1-202ENST00000524773 SLIT1O75093 1534 aa15.73■□□□□ 0.11
CAPN1-202ENST00000524773 ZNF592Q92610 1267 aa15.72■□□□□ 0.11
CAPN1-202ENST00000524773 PEAK1Q9H792 1746 aa15.72■□□□□ 0.11
CAPN1-202ENST00000524773 LARP1BQ659C4 914 aaKnown RBP15.72■□□□□ 0.11
CAPN1-202ENST00000524773 CHPF2Q9P2E5 772 aa15.72■□□□□ 0.11
CAPN1-202ENST00000524773 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.72■□□□□ 0.11
CAPN1-202ENST00000524773 V9GYY5 206 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-202ENST00000524773 ARHGAP23Q9P227 1491 aa15.72■□□□□ 0.11
CAPN1-202ENST00000524773 CEP170BQ9Y4F5 1589 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-202ENST00000524773 CHGBP05060 677 aa15.72■□□□□ 0.11
CAPN1-202ENST00000524773 ARID5BQ14865 1188 aa15.72■□□□□ 0.11
CAPN1-202ENST00000524773 ANO6Q4KMQ2 910 aa15.72■□□□□ 0.11
CAPN1-202ENST00000524773 C14orf37Q86TY3 774 aa15.72■□□□□ 0.11
CAPN1-202ENST00000524773 DACT1Q9NYF0 836 aa15.72■□□□□ 0.11
CAPN1-202ENST00000524773 MRVI1Q9Y6F6 885 aa15.71■□□□□ 0.11
CAPN1-202ENST00000524773 GNAT3A8MTJ3 354 aa15.71■□□□□ 0.11
CAPN1-202ENST00000524773 NDUFB9Q9Y6M9 179 aa15.71■□□□□ 0.11
CAPN1-202ENST00000524773 TYRO3Q06418 890 aa15.7■□□□□ 0.1
CAPN1-202ENST00000524773 CCDC192P0DO97 292 aa15.7■□□□□ 0.1
CAPN1-202ENST00000524773 NGDNQ8NEJ9 315 aaKnown RBP15.7■□□□□ 0.1
CAPN1-202ENST00000524773 EDC3Q96F86 508 aaKnown RBP15.7■□□□□ 0.1
CAPN1-202ENST00000524773 CCDC8Q9H0W5 538 aaPredicted RBP15.7■□□□□ 0.1
CAPN1-202ENST00000524773 LGR6Q9HBX8 967 aa15.7■□□□□ 0.1
CAPN1-202ENST00000524773 TBX22Q9Y458 520 aa15.7■□□□□ 0.1
CAPN1-202ENST00000524773 SSH2Q76I76 1423 aa15.7■□□□□ 0.1
CAPN1-202ENST00000524773 GTF2F1P35269 517 aaKnown RBP eCLIP15.69■□□□□ 0.14e-13■■■■□ 21.8
CAPN1-202ENST00000524773 SIL1Q9H173 461 aa15.69■□□□□ 0.1
CAPN1-202ENST00000524773 RAB11FIP3O75154 756 aa15.69■□□□□ 0.1
CAPN1-202ENST00000524773 ERCC4Q92889 916 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-202ENST00000524773 KIF1BPQ96EK5 621 aa15.69■□□□□ 0.1
CAPN1-202ENST00000524773 TRIM5Q9C035 493 aa15.69■□□□□ 0.1
CAPN1-202ENST00000524773 CBX8Q9HC52 389 aa15.69■□□□□ 0.1
CAPN1-202ENST00000524773 CYP46A1Q9Y6A2 500 aa15.69■□□□□ 0.1
CAPN1-202ENST00000524773 CHAF1AQ13111 956 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-202ENST00000524773 KLHDC4Q8TBB5 520 aa15.69■□□□□ 0.1
CAPN1-202ENST00000524773 NUP62CLQ9H1M0 184 aa15.69■□□□□ 0.1
CAPN1-202ENST00000524773 DNAJC25Q9H1X3 360 aa15.69■□□□□ 0.1
CAPN1-202ENST00000524773 AMOTL2Q9Y2J4 779 aa15.69■□□□□ 0.1
CAPN1-202ENST00000524773 CCDC9Q9Y3X0 531 aaKnown RBP15.69■□□□□ 0.1
CAPN1-202ENST00000524773 NLRP6P59044 892 aa15.68■□□□□ 0.1
CAPN1-202ENST00000524773 CWF19L2Q2TBE0 894 aaKnown RBP15.68■□□□□ 0.1
CAPN1-202ENST00000524773 LARP1Q6PKG0 1096 aaKnown RBP15.68■□□□□ 0.1
CAPN1-202ENST00000524773 TLR7Q9NYK1 1049 aaKnown RBP15.68■□□□□ 0.1
CAPN1-202ENST00000524773 LETM1O95202 739 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-202ENST00000524773 SYTL4Q96C24 671 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-202ENST00000524773 RBM8AQ9Y5S9 174 aaKnown RBP15.68■□□□□ 0.1
CAPN1-202ENST00000524773 PRAMEF22A3QJZ6 481 aa15.67■□□□□ 0.1
CAPN1-202ENST00000524773 NPHP1O15259 732 aa15.67■□□□□ 0.1
CAPN1-202ENST00000524773 NR1I2O75469 434 aa15.67■□□□□ 0.1
CAPN1-202ENST00000524773 MAP3K11Q16584 847 aa15.67■□□□□ 0.1
CAPN1-202ENST00000524773 TNMDQ9H2S6 317 aa15.67■□□□□ 0.1
CAPN1-202ENST00000524773 ATP6V1DQ9Y5K8 247 aa15.67■□□□□ 0.1
CAPN1-202ENST00000524773 JAK2O60674 1132 aa15.67■□□□□ 0.1
CAPN1-202ENST00000524773 POLA2Q14181 598 aa15.67■□□□□ 0.1
CAPN1-202ENST00000524773 CCDC144BQ3MJ40 725 aa15.67■□□□□ 0.1
CAPN1-202ENST00000524773 CCDC144CPQ8IYA2 1237 aa15.67■□□□□ 0.1
CAPN1-202ENST00000524773 LRRC2Q9BYS8 371 aa15.67■□□□□ 0.1
CAPN1-202ENST00000524773 OVOS2A0A0J9YW53 1432 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms