RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 TAF7Q15545 349 aaPredicted RBP12.82□□□□□ -0.36
CNKSR1-209ENST00000524529 ZNF622Q969S3 477 aaKnown RBP eCLIP12.82□□□□□ -0.36
CNKSR1-209ENST00000524529 THUMPD2Q9BTF0 503 aaKnown RBP12.82□□□□□ -0.36
CNKSR1-209ENST00000524529 CNBD1Q8NA66 436 aa12.81□□□□□ -0.36
CNKSR1-209ENST00000524529 RBM46Q8TBY0 533 aaKnown RBP12.81□□□□□ -0.36
CNKSR1-209ENST00000524529 SETDB2Q96T68 719 aa12.81□□□□□ -0.36
CNKSR1-209ENST00000524529 C21orf2O43822 256 aa12.8□□□□□ -0.36
CNKSR1-209ENST00000524529 SRGNP10124 158 aa12.8□□□□□ -0.36
CNKSR1-209ENST00000524529 PDE6BP35913 854 aa12.8□□□□□ -0.36
CNKSR1-209ENST00000524529 HTRA3P83110 453 aa12.8□□□□□ -0.36
CNKSR1-209ENST00000524529 HLFQ16534 295 aa12.8□□□□□ -0.36
CNKSR1-209ENST00000524529 ZNF219Q9P2Y4 722 aaPredicted RBP12.8□□□□□ -0.36
CNKSR1-209ENST00000524529 KDM2BQ8NHM5 1336 aa12.8□□□□□ -0.36
CNKSR1-209ENST00000524529 GLTPD2A6NH11 291 aa12.79□□□□□ -0.36
CNKSR1-209ENST00000524529 POTECB2RU33 542 aa12.79□□□□□ -0.36
CNKSR1-209ENST00000524529 EIF4A1P60842 406 aaKnown RBP12.79□□□□□ -0.36
CNKSR1-209ENST00000524529 CLEC4GQ6UXB4 293 aa12.79□□□□□ -0.36
CNKSR1-209ENST00000524529 ZC3H4Q9UPT8 1303 aaKnown RBP12.79□□□□□ -0.36
CNKSR1-209ENST00000524529 NFE2L2Q16236 605 aa12.78□□□□□ -0.36
CNKSR1-209ENST00000524529 C7orf43Q8WVR3 580 aa12.78□□□□□ -0.36
CNKSR1-209ENST00000524529 PDZRN3Q9UPQ7 1066 aa12.78□□□□□ -0.36
CNKSR1-209ENST00000524529 KLRG2A4D1S0 409 aaPredicted RBP12.77□□□□□ -0.37
CNKSR1-209ENST00000524529 ST5P78524 1137 aa12.77□□□□□ -0.37
CNKSR1-209ENST00000524529 STYK1Q6J9G0 422 aa12.77□□□□□ -0.37
CNKSR1-209ENST00000524529 PRPF40BQ6NWY9 871 aaKnown RBP12.77□□□□□ -0.37
CNKSR1-209ENST00000524529 NPM2Q86SE8 214 aaKnown RBP12.77□□□□□ -0.37
CNKSR1-209ENST00000524529 NBPF5PQ86XG9 351 aaPredicted RBP12.77□□□□□ -0.37
CNKSR1-209ENST00000524529 MASTLQ96GX5 879 aa12.77□□□□□ -0.37
CNKSR1-209ENST00000524529 NIP7Q9Y221 180 aaKnown RBP eCLIP12.77□□□□□ -0.37
CNKSR1-209ENST00000524529 FSTL1Q12841 308 aa12.76□□□□□ -0.37
CNKSR1-209ENST00000524529 TTLL7Q6ZT98 887 aa12.76□□□□□ -0.37
CNKSR1-209ENST00000524529 C16orf71Q8IYS4 520 aaPredicted RBP12.76□□□□□ -0.37
CNKSR1-209ENST00000524529 LTBP3Q9NS15 1303 aa12.76□□□□□ -0.37
CNKSR1-209ENST00000524529 FAM177BA6PVY3 158 aa12.75□□□□□ -0.37
CNKSR1-209ENST00000524529 RGL2O15211 777 aa12.75□□□□□ -0.37
CNKSR1-209ENST00000524529 NPHP1O15259 732 aa12.75□□□□□ -0.37
CNKSR1-209ENST00000524529 PCNTO95613 3336 aa12.75□□□□□ -0.37
CNKSR1-209ENST00000524529 OLFM4Q6UX06 510 aa12.75□□□□□ -0.37
CNKSR1-209ENST00000524529 NGEFQ8N5V2 710 aa12.75□□□□□ -0.37
CNKSR1-209ENST00000524529 CNKSR1Q969H4 720 aa12.75□□□□□ -0.37
CNKSR1-209ENST00000524529 ABCC12Q96J65 1359 aa12.75□□□□□ -0.37
CNKSR1-209ENST00000524529 ZNF652Q9Y2D9 606 aa12.75□□□□□ -0.37
CNKSR1-209ENST00000524529 ERFEQ4G0M1 354 aa12.74□□□□□ -0.37
CNKSR1-209ENST00000524529 LRP10Q7Z4F1 713 aa12.74□□□□□ -0.37
CNKSR1-209ENST00000524529 PNISRQ8TF01 805 aaKnown RBP12.74□□□□□ -0.37
CNKSR1-209ENST00000524529 TAOK3Q9H2K8 898 aa12.74□□□□□ -0.37
CNKSR1-209ENST00000524529 SNED1Q8TER0 1413 aa12.73□□□□□ -0.37
CNKSR1-209ENST00000524529 MAP3K15Q6ZN16 1313 aa12.73□□□□□ -0.37
CNKSR1-209ENST00000524529 UBN2Q6ZU65 1347 aa12.73□□□□□ -0.37
CNKSR1-209ENST00000524529 NEFMP07197 916 aa12.73□□□□□ -0.37
CNKSR1-209ENST00000524529 VEGFAP15692 232 aaPredicted RBP12.73□□□□□ -0.37
CNKSR1-209ENST00000524529 NPR1P16066 1061 aa12.73□□□□□ -0.37
CNKSR1-209ENST00000524529 TPTE2Q6XPS3 522 aa12.73□□□□□ -0.37
CNKSR1-209ENST00000524529 SLC51AQ86UW1 340 aa12.73□□□□□ -0.37
CNKSR1-209ENST00000524529 JMYQ8N9B5 988 aa12.73□□□□□ -0.37
CNKSR1-209ENST00000524529 RRP7AQ9Y3A4 280 aaKnown RBP12.73□□□□□ -0.37
CNKSR1-209ENST00000524529 ERVV-1B6SEH8 477 aa12.72□□□□□ -0.37
CNKSR1-209ENST00000524529 DDNO94850 711 aaPredicted RBP12.72□□□□□ -0.37
CNKSR1-209ENST00000524529 MYL6BP14649 208 aa12.72□□□□□ -0.37
CNKSR1-209ENST00000524529 PDIA6Q15084 440 aa12.72□□□□□ -0.37
CNKSR1-209ENST00000524529 RALBP1Q15311 655 aa12.72□□□□□ -0.37
CNKSR1-209ENST00000524529 NUTM1Q86Y26 1132 aa12.72□□□□□ -0.37
CNKSR1-209ENST00000524529 SMC1BQ8NDV3 1235 aa12.72□□□□□ -0.37
CNKSR1-209ENST00000524529 KLRG1Q96E93 195 aa12.72□□□□□ -0.37
CNKSR1-209ENST00000524529 MAPK8IP3Q9UPT6 1336 aa12.71□□□□□ -0.37
CNKSR1-209ENST00000524529 POTEIP0CG38 1075 aa12.71□□□□□ -0.37
CNKSR1-209ENST00000524529 POTEJP0CG39 1038 aa12.71□□□□□ -0.37
CNKSR1-209ENST00000524529 TMPOP42166 694 aaKnown RBP12.71□□□□□ -0.37
CNKSR1-209ENST00000524529 RIPK4P57078 832 aa12.71□□□□□ -0.37
CNKSR1-209ENST00000524529 PROSER3Q2NL68 480 aa12.71□□□□□ -0.37
CNKSR1-209ENST00000524529 ZBTB3Q9H5J0 574 aa12.71□□□□□ -0.37
CNKSR1-209ENST00000524529 ANKRD36CQ5JPF3 1778 aa12.71□□□□□ -0.38
CNKSR1-209ENST00000524529 SCN4AP35499 1836 aa12.7□□□□□ -0.38
CNKSR1-209ENST00000524529 ANXA1P04083 346 aa12.7□□□□□ -0.38
CNKSR1-209ENST00000524529 GPTP24298 496 aa12.7□□□□□ -0.38
CNKSR1-209ENST00000524529 CRY2Q49AN0 593 aa12.7□□□□□ -0.38
CNKSR1-209ENST00000524529 CCDC93Q567U6 631 aa12.7□□□□□ -0.38
CNKSR1-209ENST00000524529 COL13A1Q5TAT6 717 aaPredicted RBP12.7□□□□□ -0.38
CNKSR1-209ENST00000524529 SUSD4Q5VX71 490 aa12.7□□□□□ -0.38
CNKSR1-209ENST00000524529 ZNF34Q8IZ26 560 aa12.7□□□□□ -0.38
CNKSR1-209ENST00000524529 TSPYL4Q9UJ04 414 aa12.7□□□□□ -0.38
CNKSR1-209ENST00000524529 LAMB2P55268 1798 aa12.7□□□□□ -0.38
CNKSR1-209ENST00000524529 COL4A5P29400 1685 aa12.7□□□□□ -0.38
CNKSR1-209ENST00000524529 MYBBP1AQ9BQG0 1328 aaKnown RBP12.69□□□□□ -0.38
CNKSR1-209ENST00000524529 FKBP4Q02790 459 aaKnown RBP eCLIP12.69□□□□□ -0.38
CNKSR1-209ENST00000524529 KRT24Q2M2I5 525 aa12.69□□□□□ -0.38
CNKSR1-209ENST00000524529 SOGA3Q5TF21 947 aa12.69□□□□□ -0.38
CNKSR1-209ENST00000524529 DPY19L2Q6NUT2 758 aa12.69□□□□□ -0.38
CNKSR1-209ENST00000524529 C3orf67Q6ZVT6 689 aa12.69□□□□□ -0.38
CNKSR1-209ENST00000524529 CCDC146Q8IYE0 955 aa12.69□□□□□ -0.38
CNKSR1-209ENST00000524529 PNNQ9H307 717 aaKnown RBP12.69□□□□□ -0.38
CNKSR1-209ENST00000524529 PRKRIP1Q9H875 184 aaPredicted RBP12.69□□□□□ -0.38
CNKSR1-209ENST00000524529 ZNF277Q9NRM2 450 aaPredicted RBP12.69□□□□□ -0.38
CNKSR1-209ENST00000524529 TAF1P21675 1872 aa12.69□□□□□ -0.38
CNKSR1-209ENST00000524529 RIC1Q4ADV7 1423 aa12.69□□□□□ -0.38
CNKSR1-209ENST00000524529 ERBB4Q15303 1308 aa12.68□□□□□ -0.38
CNKSR1-209ENST00000524529 ZNF541Q9H0D2 1346 aa12.68□□□□□ -0.38
CNKSR1-209ENST00000524529 NTSR2O95665 410 aa12.68□□□□□ -0.38
CNKSR1-209ENST00000524529 EIF2S2P20042 333 aaKnown RBP12.68□□□□□ -0.38
CNKSR1-209ENST00000524529 GIGYF2Q6Y7W6 1299 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms