RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 SOWAHDA6NJG2 315 aa4.75□□□□□ -1.65
LINC01339-204ENST00000524094 ATP2B4P23634 1241 aa4.75□□□□□ -1.65
LINC01339-204ENST00000524094 ARID4AP29374 1257 aaPredicted RBP4.75□□□□□ -1.65
LINC01339-204ENST00000524094 SEC13P55735 322 aa4.75□□□□□ -1.65
LINC01339-204ENST00000524094 USP4Q13107 963 aa4.75□□□□□ -1.65
LINC01339-204ENST00000524094 TPCN2Q8NHX9 752 aa4.75□□□□□ -1.65
LINC01339-204ENST00000524094 SEPT3Q9UH03 358 aa4.75□□□□□ -1.65
LINC01339-204ENST00000524094 PCDHB11Q9Y5F2 797 aa4.75□□□□□ -1.65
LINC01339-204ENST00000524094 HRH3Q9Y5N1 445 aa4.75□□□□□ -1.65
LINC01339-204ENST00000524094 UNCXA6NJT0 531 aa4.74□□□□□ -1.65
LINC01339-204ENST00000524094 PATL2C9JE40 543 aaKnown RBP4.74□□□□□ -1.65
LINC01339-204ENST00000524094 M0R2N6 131 aa4.74□□□□□ -1.65
LINC01339-204ENST00000524094 PRMT3O60678 531 aa4.74□□□□□ -1.65
LINC01339-204ENST00000524094 AGERQ15109 404 aa4.74□□□□□ -1.65
LINC01339-204ENST00000524094 RNF20Q5VTR2 975 aa4.74□□□□□ -1.65
LINC01339-204ENST00000524094 TRIM50Q86XT4 487 aa4.74□□□□□ -1.65
LINC01339-204ENST00000524094 ZNF295-AS1Q8N0V1 137 aa4.74□□□□□ -1.65
LINC01339-204ENST00000524094 TSEN2Q8NCE0 465 aaKnown RBP4.74□□□□□ -1.65
LINC01339-204ENST00000524094 EDARADDQ8WWZ3 215 aa4.74□□□□□ -1.65
LINC01339-204ENST00000524094 ZNF592Q92610 1267 aa4.74□□□□□ -1.65
LINC01339-204ENST00000524094 GMCL1Q96IK5 515 aa4.74□□□□□ -1.65
LINC01339-204ENST00000524094 ZNF358Q9NW07 568 aa4.74□□□□□ -1.65
LINC01339-204ENST00000524094 WASLO00401 505 aaPredicted RBP4.73□□□□□ -1.65
LINC01339-204ENST00000524094 CTSOP43234 321 aaPredicted RBP4.73□□□□□ -1.65
LINC01339-204ENST00000524094 ATP1A2P50993 1020 aa4.73□□□□□ -1.65
LINC01339-204ENST00000524094 FKBP5Q13451 457 aaPredicted RBP4.73□□□□□ -1.65
LINC01339-204ENST00000524094 SLC10A4Q96EP9 437 aa4.73□□□□□ -1.65
LINC01339-204ENST00000524094 SLC4A9Q96Q91 983 aa4.73□□□□□ -1.65
LINC01339-204ENST00000524094 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
LINC01339-204ENST00000524094 AMPD1P23109 780 aa4.72□□□□□ -1.65
LINC01339-204ENST00000524094 CCDC125Q86Z20 511 aa4.72□□□□□ -1.65
LINC01339-204ENST00000524094 TRIM22Q8IYM9 498 aa4.72□□□□□ -1.65
LINC01339-204ENST00000524094 TNS4Q8IZW8 715 aa4.72□□□□□ -1.65
LINC01339-204ENST00000524094 ZNF784Q8NCA9 323 aaPredicted RBP4.72□□□□□ -1.65
LINC01339-204ENST00000524094 ETNK1Q9HBU6 452 aa4.72□□□□□ -1.65
LINC01339-204ENST00000524094 CDV3Q9UKY7 258 aaKnown RBP4.72□□□□□ -1.65
LINC01339-204ENST00000524094 USP3Q9Y6I4 520 aa4.72□□□□□ -1.65
LINC01339-204ENST00000524094 A0A1W2PRU2 124 aa4.71□□□□□ -1.66
LINC01339-204ENST00000524094 MAP2K3P46734 347 aa4.71□□□□□ -1.66
LINC01339-204ENST00000524094 ARHGAP4P98171 946 aa4.71□□□□□ -1.66
LINC01339-204ENST00000524094 CCDC27Q2M243 656 aa4.71□□□□□ -1.66
LINC01339-204ENST00000524094 NBPF20Q3BBV1 942 aa4.71□□□□□ -1.66
LINC01339-204ENST00000524094 FAM26DQ5JW98 314 aa4.71□□□□□ -1.66
LINC01339-204ENST00000524094 POTEAQ6S8J7 498 aa4.71□□□□□ -1.66
LINC01339-204ENST00000524094 IGSF5Q9NSI5 407 aa4.71□□□□□ -1.66
LINC01339-204ENST00000524094 AMOTL2Q9Y2J4 779 aa4.71□□□□□ -1.66
LINC01339-204ENST00000524094 ICMTO60725 284 aa4.7□□□□□ -1.66
LINC01339-204ENST00000524094 NPR3P17342 541 aa4.7□□□□□ -1.66
LINC01339-204ENST00000524094 RAB15P59190 212 aa4.7□□□□□ -1.66
LINC01339-204ENST00000524094 PPP1R26Q5T8A7 1209 aaPredicted RBP4.7□□□□□ -1.66
LINC01339-204ENST00000524094 CC2D2BQ6DHV5 1058 aa4.7□□□□□ -1.66
LINC01339-204ENST00000524094 VASH1Q7L8A9 365 aaPredicted RBP4.7□□□□□ -1.66
LINC01339-204ENST00000524094 C7orf43Q8WVR3 580 aa4.7□□□□□ -1.66
LINC01339-204ENST00000524094 GTPBP3Q969Y2 492 aaKnown RBP4.7□□□□□ -1.66
LINC01339-204ENST00000524094 XAGE2Q96GT9 111 aa4.7□□□□□ -1.66
LINC01339-204ENST00000524094 TRERF1Q96PN7 1200 aa4.7□□□□□ -1.66
LINC01339-204ENST00000524094 SAP130Q9H0E3 1048 aa4.7□□□□□ -1.66
LINC01339-204ENST00000524094 IQSEC3Q9UPP2 1182 aaPredicted RBP4.7□□□□□ -1.66
LINC01339-204ENST00000524094 ATAD2Q6PL18 1390 aa4.69□□□□□ -1.66
LINC01339-204ENST00000524094 RBM47A0AV96 593 aaKnown RBP4.69□□□□□ -1.66
LINC01339-204ENST00000524094 IL2RAP01589 272 aa4.69□□□□□ -1.66
LINC01339-204ENST00000524094 IGHA2P01877 340 aa4.69□□□□□ -1.66
LINC01339-204ENST00000524094 INHAP05111 366 aa4.69□□□□□ -1.66
LINC01339-204ENST00000524094 MTMR3Q13615 1198 aa4.69□□□□□ -1.66
LINC01339-204ENST00000524094 MTFR1Q15390 333 aa4.69□□□□□ -1.66
LINC01339-204ENST00000524094 DBN1Q16643 649 aa4.69□□□□□ -1.66
LINC01339-204ENST00000524094 RNF217Q8TC41 542 aa4.69□□□□□ -1.66
LINC01339-204ENST00000524094 GTF3C2Q8WUA4 911 aaPredicted RBP4.69□□□□□ -1.66
LINC01339-204ENST00000524094 SIRT1Q96EB6 747 aa4.69□□□□□ -1.66
LINC01339-204ENST00000524094 ANO2Q9NQ90 1003 aa4.69□□□□□ -1.66
LINC01339-204ENST00000524094 CYLDQ9NQC7 956 aa4.69□□□□□ -1.66
LINC01339-204ENST00000524094 KIAA1522Q9P206 1035 aaPredicted RBP4.69□□□□□ -1.66
LINC01339-204ENST00000524094 EMILIN1Q9Y6C2 1016 aa4.69□□□□□ -1.66
LINC01339-204ENST00000524094 H2AFB1P0C5Y9 115 aa4.68□□□□□ -1.66
LINC01339-204ENST00000524094 H2AFB2P0C5Z0 115 aa4.68□□□□□ -1.66
LINC01339-204ENST00000524094 IGFBP4P22692 258 aa4.68□□□□□ -1.66
LINC01339-204ENST00000524094 GDF10P55107 478 aa4.68□□□□□ -1.66
LINC01339-204ENST00000524094 TAGLNQ01995 201 aaKnown RBP4.68□□□□□ -1.66
LINC01339-204ENST00000524094 FBLN7Q53RD9 439 aa4.68□□□□□ -1.66
LINC01339-204ENST00000524094 B4GALNT3Q6L9W6 998 aa4.68□□□□□ -1.66
LINC01339-204ENST00000524094 COL26A1Q96A83 441 aa4.68□□□□□ -1.66
LINC01339-204ENST00000524094 HINFPQ9BQA5 517 aa4.68□□□□□ -1.66
LINC01339-204ENST00000524094 TSPAN10Q9H1Z9 355 aaPredicted RBP4.68□□□□□ -1.66
LINC01339-204ENST00000524094 EGFL7Q9UHF1 273 aa4.68□□□□□ -1.66
LINC01339-204ENST00000524094 TNFRSF10BO14763 440 aa4.67□□□□□ -1.66
LINC01339-204ENST00000524094 FSHRP23945 695 aa4.67□□□□□ -1.66
LINC01339-204ENST00000524094 CBLBQ13191 982 aa4.67□□□□□ -1.66
LINC01339-204ENST00000524094 ZNF211Q13398 564 aaPredicted RBP4.67□□□□□ -1.66
LINC01339-204ENST00000524094 NAA30Q147X3 362 aaPredicted RBP4.67□□□□□ -1.66
LINC01339-204ENST00000524094 NPAS4Q8IUM7 802 aa4.67□□□□□ -1.66
LINC01339-204ENST00000524094 KLRG1Q96E93 195 aa4.67□□□□□ -1.66
LINC01339-204ENST00000524094 INSM2Q96T92 566 aaPredicted RBP4.67□□□□□ -1.66
LINC01339-204ENST00000524094 C2orf49Q9BVC5 232 aaPredicted RBP4.67□□□□□ -1.66
LINC01339-204ENST00000524094 FHDC1Q9C0D6 1143 aaPredicted RBP4.67□□□□□ -1.66
LINC01339-204ENST00000524094 POLMQ9NP87 494 aaPredicted RBP4.67□□□□□ -1.66
LINC01339-204ENST00000524094 SCHIP1Q9P0W5 487 aaPredicted RBP4.67□□□□□ -1.66
LINC01339-204ENST00000524094 GDF2Q9UK05 429 aaPredicted RBP4.67□□□□□ -1.66
LINC01339-204ENST00000524094 LRFN2Q9ULH4 789 aa4.67□□□□□ -1.66
LINC01339-204ENST00000524094 CCDC180Q9P1Z9 1646 aa4.66□□□□□ -1.66
LINC01339-204ENST00000524094 ZBTB39O15060 712 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms