RNA–Protein interactions for RNA: ENST00000523799.5

CCNC-215, Transcript of cyclin C, human

TSL 3 BASIC

Gene CCNC, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNC-215	ENST00000523799	FBLN1	P23142	703 aa		11.77	□□□□□ -0.53
CCNC-215	ENST00000523799	MLLT1	Q03111	559 aa	Predicted RBP	11.77	□□□□□ -0.53
CCNC-215	ENST00000523799	ABHD8	Q96I13	439 aa		11.77	□□□□□ -0.53
CCNC-215	ENST00000523799	SPG7	Q9UQ90	795 aa		11.77	□□□□□ -0.53
CCNC-215	ENST00000523799	RRS1	Q15050	365 aa	Known RBP	11.76	□□□□□ -0.53
CCNC-215	ENST00000523799	CFAP44	Q96MT7	982 aa		11.76	□□□□□ -0.53
CCNC-215	ENST00000523799	CNTNAP1	P78357	1384 aa		11.76	□□□□□ -0.53
CCNC-215	ENST00000523799	KIF24	Q5T7B8	1368 aa		11.76	□□□□□ -0.53
CCNC-215	ENST00000523799	VIRMA	Q69YN4	1812 aa	Known RBP	11.75	□□□□□ -0.53
CCNC-215	ENST00000523799	RPS6KA4	O75676	772 aa		11.75	□□□□□ -0.53
CCNC-215	ENST00000523799	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.75	□□□□□ -0.53
CCNC-215	ENST00000523799	ATG3	Q9NT62	314 aa		11.75	□□□□□ -0.53
CCNC-215	ENST00000523799	CNTNAP4	Q9C0A0	1308 aa		11.75	□□□□□ -0.53
CCNC-215	ENST00000523799	KDR	P35968	1356 aa		11.75	□□□□□ -0.53
CCNC-215	ENST00000523799	DICER1	Q9UPY3	1922 aa	Known RBP	11.74	□□□□□ -0.53
CCNC-215	ENST00000523799	MYH14	Q7Z406	1995 aa	Known RBP	11.74	□□□□□ -0.53
CCNC-215	ENST00000523799	TNRC18	O15417	2968 aa	Predicted RBP	11.74	□□□□□ -0.53
CCNC-215	ENST00000523799	CHRNA5	P30532	468 aa		11.74	□□□□□ -0.53
CCNC-215	ENST00000523799	RGS19	P49795	217 aa		11.74	□□□□□ -0.53
CCNC-215	ENST00000523799	RASSF7	Q02833	373 aa		11.74	□□□□□ -0.53
CCNC-215	ENST00000523799	HSP90AB2P	Q58FF8	381 aa		11.74	□□□□□ -0.53
CCNC-215	ENST00000523799	FLT4	P35916	1363 aa		11.74	□□□□□ -0.53
CCNC-215	ENST00000523799	DLEC1	Q9Y238	1755 aa		11.74	□□□□□ -0.53
CCNC-215	ENST00000523799	POTEC	B2RU33	542 aa		11.73	□□□□□ -0.53
CCNC-215	ENST00000523799	LBX1	P52954	281 aa		11.73	□□□□□ -0.53
CCNC-215	ENST00000523799	SPNS2	Q8IVW8	549 aa		11.73	□□□□□ -0.53
CCNC-215	ENST00000523799	WBP1L	Q9NX94	342 aa		11.73	□□□□□ -0.53
CCNC-215	ENST00000523799	NCAPD2	Q15021	1401 aa		11.72	□□□□□ -0.53
CCNC-215	ENST00000523799	EMP3	P54852	163 aa		11.72	□□□□□ -0.53
CCNC-215	ENST00000523799	TMEM92	Q6UXU6	159 aa		11.72	□□□□□ -0.53
CCNC-215	ENST00000523799	IFNL2	Q8IZJ0	200 aa		11.72	□□□□□ -0.53
CCNC-215	ENST00000523799	DDR1	Q08345	913 aa		11.71	□□□□□ -0.53
CCNC-215	ENST00000523799	MMRN1	Q13201	1228 aa		11.71	□□□□□ -0.53
CCNC-215	ENST00000523799	USP42	Q9H9J4	1324 aa	Known RBP	11.7	□□□□□ -0.54
CCNC-215	ENST00000523799	PHKG2	P15735	406 aa		11.7	□□□□□ -0.54
CCNC-215	ENST00000523799	VEGFB	P49765	207 aa		11.7	□□□□□ -0.54
CCNC-215	ENST00000523799	SLC4A9	Q96Q91	983 aa		11.7	□□□□□ -0.54
CCNC-215	ENST00000523799	PDE4DIP	Q5VU43	2346 aa		11.7	□□□□□ -0.54
CCNC-215	ENST00000523799	AFDN	P55196	1824 aa	Known RBP	11.7	□□□□□ -0.54
CCNC-215	ENST00000523799	TONSL	Q96HA7	1378 aa		11.69	□□□□□ -0.54
CCNC-215	ENST00000523799	PASK	Q96RG2	1323 aa		11.69	□□□□□ -0.54
CCNC-215	ENST00000523799	CCDC85C	A6NKD9	419 aa		11.69	□□□□□ -0.54
CCNC-215	ENST00000523799	POLRMT	O00411	1230 aa	Known RBP	11.69	□□□□□ -0.54
CCNC-215	ENST00000523799	FYB1	O15117	783 aa		11.69	□□□□□ -0.54
CCNC-215	ENST00000523799	HSPA8	P11142	646 aa	Known RBP	11.69	□□□□□ -0.54
CCNC-215	ENST00000523799	TM4SF1	P30408	202 aa		11.69	□□□□□ -0.54
CCNC-215	ENST00000523799	TTLL6	Q8N841	843 aa		11.69	□□□□□ -0.54
CCNC-215	ENST00000523799	CARD11	Q9BXL7	1154 aa		11.69	□□□□□ -0.54
CCNC-215	ENST00000523799	SCN4A	P35499	1836 aa		11.68	□□□□□ -0.54
CCNC-215	ENST00000523799	KIF20B	Q96Q89	1820 aa		11.68	□□□□□ -0.54
CCNC-215	ENST00000523799	TMEM88B	A6NKF7	163 aa		11.68	□□□□□ -0.54
CCNC-215	ENST00000523799	ERVV-2	B6SEH9	535 aa		11.68	□□□□□ -0.54
CCNC-215	ENST00000523799	MAP2K1	Q02750	393 aa	Predicted RBP	11.68	□□□□□ -0.54
CCNC-215	ENST00000523799	GGNBP2	Q9H3C7	697 aa		11.68	□□□□□ -0.54
CCNC-215	ENST00000523799	SRP68	Q9UHB9	627 aa	Known RBP	11.68	□□□□□ -0.54
CCNC-215	ENST00000523799	NRXN2	Q9P2S2	1712 aa		11.67	□□□□□ -0.54
CCNC-215	ENST00000523799	NFKBIE	O00221	500 aa		11.67	□□□□□ -0.54
CCNC-215	ENST00000523799	SLC24A1	O60721	1099 aa		11.67	□□□□□ -0.54
CCNC-215	ENST00000523799	ERFE	Q4G0M1	354 aa		11.67	□□□□□ -0.54
CCNC-215	ENST00000523799	LDHD	Q86WU2	507 aa		11.67	□□□□□ -0.54
CCNC-215	ENST00000523799	FER1L6	Q2WGJ9	1857 aa		11.67	□□□□□ -0.54
CCNC-215	ENST00000523799	IQCA1L	A6NCM1	817 aa		11.66	□□□□□ -0.54
CCNC-215	ENST00000523799	CRKL	P46109	303 aa	Known RBP	11.66	□□□□□ -0.54
CCNC-215	ENST00000523799	ADAMTS7	Q9UKP4	1686 aa		11.65	□□□□□ -0.54
CCNC-215	ENST00000523799	ZPR1	O75312	459 aa		11.65	□□□□□ -0.54
CCNC-215	ENST00000523799	HSP90AB1	P08238	724 aa	Known RBP	11.65	□□□□□ -0.54
CCNC-215	ENST00000523799	PLCB2	Q00722	1185 aa		11.65	□□□□□ -0.54
CCNC-215	ENST00000523799	ANKRD26	Q9UPS8	1709 aa		11.65	□□□□□ -0.54
CCNC-215	ENST00000523799	RASSF10	A6NK89	507 aa		11.64	□□□□□ -0.55
CCNC-215	ENST00000523799		H0YIN7	160 aa		11.64	□□□□□ -0.55
CCNC-215	ENST00000523799	DEFB115	Q30KQ5	88 aa		11.64	□□□□□ -0.55
CCNC-215	ENST00000523799	ITGBL1	O95965	494 aa	Predicted RBP	11.63	□□□□□ -0.55
CCNC-215	ENST00000523799	C2CD5	Q86YS7	1000 aa		11.63	□□□□□ -0.55
CCNC-215	ENST00000523799	HS3ST6	Q96QI5	342 aa		11.63	□□□□□ -0.55
CCNC-215	ENST00000523799	EYA1	Q99502	592 aa		11.63	□□□□□ -0.55
CCNC-215	ENST00000523799	BEGAIN	Q9BUH8	593 aa		11.63	□□□□□ -0.55
CCNC-215	ENST00000523799	TJP1	Q07157	1748 aa		11.63	□□□□□ -0.55
CCNC-215	ENST00000523799	WDR33	Q9C0J8	1336 aa	Known RBP	11.62	□□□□□ -0.55
CCNC-215	ENST00000523799	LTBP3	Q9NS15	1303 aa		11.62	□□□□□ -0.55
CCNC-215	ENST00000523799	FAM205C	A6NFA0	338 aa		11.62	□□□□□ -0.55
CCNC-215	ENST00000523799	DDN	O94850	711 aa	Predicted RBP	11.62	□□□□□ -0.55
CCNC-215	ENST00000523799	CABP4	P57796	275 aa		11.62	□□□□□ -0.55
CCNC-215	ENST00000523799	USPL1	Q5W0Q7	1092 aa		11.62	□□□□□ -0.55
CCNC-215	ENST00000523799	PDZRN3	Q9UPQ7	1066 aa		11.62	□□□□□ -0.55
CCNC-215	ENST00000523799	EMILIN1	Q9Y6C2	1016 aa		11.62	□□□□□ -0.55
CCNC-215	ENST00000523799	WASHC2A	Q641Q2	1341 aa		11.61	□□□□□ -0.55
CCNC-215	ENST00000523799	PTCD1	O75127	700 aa	Known RBP	11.61	□□□□□ -0.55
CCNC-215	ENST00000523799	NFIX	Q14938	502 aa		11.61	□□□□□ -0.55
CCNC-215	ENST00000523799	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.61	□□□□□ -0.55
CCNC-215	ENST00000523799	THSD7B	Q9C0I4	1608 aa		11.6	□□□□□ -0.55
CCNC-215	ENST00000523799	PPM1G	O15355	546 aa	Predicted RBP	11.6	□□□□□ -0.55
CCNC-215	ENST00000523799	SERPINB2	P05120	415 aa		11.6	□□□□□ -0.55
CCNC-215	ENST00000523799	INTS5	Q6P9B9	1019 aa	Known RBP	11.6	□□□□□ -0.55
CCNC-215	ENST00000523799	TESK2	Q96S53	571 aa		11.6	□□□□□ -0.55
CCNC-215	ENST00000523799	SIN3A	Q96ST3	1273 aa		11.6	□□□□□ -0.55
CCNC-215	ENST00000523799	TAOK3	Q9H2K8	898 aa		11.6	□□□□□ -0.55
CCNC-215	ENST00000523799	ADAMTSL1	Q8N6G6	1762 aa		11.59	□□□□□ -0.55
CCNC-215	ENST00000523799	C2orf72	A6NCS6	295 aa		11.59	□□□□□ -0.55
CCNC-215	ENST00000523799	C21orf2	O43822	256 aa		11.59	□□□□□ -0.55
CCNC-215	ENST00000523799	NEUROD1	Q13562	356 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms