RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 FMR1Q06787 632 aaKnown RBP eCLIP13.42□□□□□ -0.26
LAMA4-220ENST00000523765 SLC39A6Q13433 755 aa13.42□□□□□ -0.26
LAMA4-220ENST00000523765 PLEKHO1Q53GL0 409 aaPredicted RBP13.42□□□□□ -0.26
LAMA4-220ENST00000523765 LDHDQ86WU2 507 aa13.42□□□□□ -0.26
LAMA4-220ENST00000523765 SCN7AQ01118 1682 aa13.42□□□□□ -0.26
LAMA4-220ENST00000523765 LTBP1Q14766 1721 aa13.42□□□□□ -0.26
LAMA4-220ENST00000523765 RASSF10A6NK89 507 aa13.41□□□□□ -0.26
LAMA4-220ENST00000523765 WDR33Q9C0J8 1336 aaKnown RBP13.4□□□□□ -0.26
LAMA4-220ENST00000523765 ZNF541Q9H0D2 1346 aa13.4□□□□□ -0.26
LAMA4-220ENST00000523765 UBR2Q8IWV8 1755 aa13.4□□□□□ -0.26
LAMA4-220ENST00000523765 EAPPQ56P03 285 aaPredicted RBP13.4□□□□□ -0.26
LAMA4-220ENST00000523765 TBC1D9BQ66K14 1250 aa13.4□□□□□ -0.26
LAMA4-220ENST00000523765 SPDYE1Q8NFV5 336 aaPredicted RBP13.4□□□□□ -0.26
LAMA4-220ENST00000523765 LGR6Q9HBX8 967 aa13.4□□□□□ -0.26
LAMA4-220ENST00000523765 TSKSQ9UJT2 592 aa13.4□□□□□ -0.26
LAMA4-220ENST00000523765 LTBP3Q9NS15 1303 aa13.39□□□□□ -0.27
LAMA4-220ENST00000523765 DEFB115Q30KQ5 88 aa13.39□□□□□ -0.27
LAMA4-220ENST00000523765 MAP1SQ66K74 1059 aaPredicted RBP13.39□□□□□ -0.27
LAMA4-220ENST00000523765 L3MBTL3Q96JM7 780 aaPredicted RBP13.39□□□□□ -0.27
LAMA4-220ENST00000523765 TAOK3Q9H2K8 898 aa13.39□□□□□ -0.27
LAMA4-220ENST00000523765 CLSPNQ9HAW4 1339 aa13.39□□□□□ -0.27
LAMA4-220ENST00000523765 CANXP27824 592 aaKnown RBP13.38□□□□□ -0.27
LAMA4-220ENST00000523765 PRR5LQ6MZQ0 368 aa13.38□□□□□ -0.27
LAMA4-220ENST00000523765 OLFM4Q6UX06 510 aa13.38□□□□□ -0.27
LAMA4-220ENST00000523765 MRC1P22897 1456 aa13.37□□□□□ -0.27
LAMA4-220ENST00000523765 AMOTQ4VCS5 1084 aa13.37□□□□□ -0.27
LAMA4-220ENST00000523765 C1orf141Q5JVX7 400 aa13.37□□□□□ -0.27
LAMA4-220ENST00000523765 PRPF40BQ6NWY9 871 aaKnown RBP13.36□□□□□ -0.27
LAMA4-220ENST00000523765 CNTROBQ8N137 903 aa13.36□□□□□ -0.27
LAMA4-220ENST00000523765 BRIP1Q9BX63 1249 aa13.36□□□□□ -0.27
LAMA4-220ENST00000523765 SLC52A2Q9HAB3 445 aa13.36□□□□□ -0.27
LAMA4-220ENST00000523765 CLEC11AQ9Y240 323 aa13.36□□□□□ -0.27
LAMA4-220ENST00000523765 RNF123Q5XPI4 1314 aa13.36□□□□□ -0.27
LAMA4-220ENST00000523765 COL4A5P29400 1685 aa13.35□□□□□ -0.27
LAMA4-220ENST00000523765 IQCA1LA6NCM1 817 aa13.35□□□□□ -0.27
LAMA4-220ENST00000523765 SLC24A1O60721 1099 aa13.35□□□□□ -0.27
LAMA4-220ENST00000523765 CASP8AP2Q9UKL3 1982 aa13.34□□□□□ -0.27
LAMA4-220ENST00000523765 EPHX2P34913 555 aa13.34□□□□□ -0.27
LAMA4-220ENST00000523765 PDE6BP35913 854 aa13.34□□□□□ -0.27
LAMA4-220ENST00000523765 EIF5P55010 431 aaKnown RBP13.34□□□□□ -0.27
LAMA4-220ENST00000523765 MAP2K1Q02750 393 aaPredicted RBP13.34□□□□□ -0.27
LAMA4-220ENST00000523765 GRM1Q13255 1194 aa13.34□□□□□ -0.27
LAMA4-220ENST00000523765 CYP4F22Q6NT55 531 aa13.34□□□□□ -0.27
LAMA4-220ENST00000523765 C7orf43Q8WVR3 580 aa13.34□□□□□ -0.27
LAMA4-220ENST00000523765 CFAP44Q96MT7 982 aa13.34□□□□□ -0.27
LAMA4-220ENST00000523765 ZNF277Q9NRM2 450 aaPredicted RBP13.34□□□□□ -0.27
LAMA4-220ENST00000523765 ABT1Q9ULW3 272 aaKnown RBP13.34□□□□□ -0.27
LAMA4-220ENST00000523765 TBC1D2BQ9UPU7 963 aa13.34□□□□□ -0.27
LAMA4-220ENST00000523765 BCORQ6W2J9 1755 aa13.34□□□□□ -0.27
LAMA4-220ENST00000523765 AOC2O75106 756 aa13.33□□□□□ -0.28
LAMA4-220ENST00000523765 SRGNP10124 158 aa13.33□□□□□ -0.28
LAMA4-220ENST00000523765 SULT6B1Q6IMI4 303 aa13.33□□□□□ -0.28
LAMA4-220ENST00000523765 CAPNS2Q96L46 248 aa13.33□□□□□ -0.28
LAMA4-220ENST00000523765 MCOLN1Q9GZU1 580 aa13.33□□□□□ -0.28
LAMA4-220ENST00000523765 HACL1Q9UJ83 578 aa13.33□□□□□ -0.28
LAMA4-220ENST00000523765 TRPM7Q96QT4 1865 aa13.33□□□□□ -0.28
LAMA4-220ENST00000523765 RNMTO43148 476 aaKnown RBP13.32□□□□□ -0.28
LAMA4-220ENST00000523765 CST9Q5W186 159 aa13.31□□□□□ -0.28
LAMA4-220ENST00000523765 STYK1Q6J9G0 422 aa13.31□□□□□ -0.28
LAMA4-220ENST00000523765 SLC51AQ86UW1 340 aa13.31□□□□□ -0.28
LAMA4-220ENST00000523765 GPR101Q96P66 508 aaPredicted RBP13.31□□□□□ -0.28
LAMA4-220ENST00000523765 DDX21Q9NR30 783 aaKnown RBP eCLIP13.31□□□□□ -0.28
LAMA4-220ENST00000523765 TRAF5O00463 557 aa13.3□□□□□ -0.28
LAMA4-220ENST00000523765 AKAP4Q5JQC9 854 aa13.3□□□□□ -0.28
LAMA4-220ENST00000523765 PAXIP1Q6ZW49 1069 aaPredicted RBP13.3□□□□□ -0.28
LAMA4-220ENST00000523765 CNKSR1Q969H4 720 aa13.3□□□□□ -0.28
LAMA4-220ENST00000523765 SIPA1L3O60292 1781 aaPredicted RBP13.3□□□□□ -0.28
LAMA4-220ENST00000523765 CDCA8Q53HL2 280 aa13.29□□□□□ -0.28
LAMA4-220ENST00000523765 CNBD1Q8NA66 436 aa13.29□□□□□ -0.28
LAMA4-220ENST00000523765 MASTLQ96GX5 879 aa13.29□□□□□ -0.28
LAMA4-220ENST00000523765 ZNF330Q9Y3S2 320 aaPredicted RBP13.29□□□□□ -0.28
LAMA4-220ENST00000523765 PRKAR2AP13861 404 aaKnown RBP13.28□□□□□ -0.28
LAMA4-220ENST00000523765 IL13P35225 146 aa13.28□□□□□ -0.28
LAMA4-220ENST00000523765 FKBP4Q02790 459 aaKnown RBP eCLIP13.28□□□□□ -0.28
LAMA4-220ENST00000523765 PDZRN3Q9UPQ7 1066 aa13.28□□□□□ -0.28
LAMA4-220ENST00000523765 SNED1Q8TER0 1413 aa13.28□□□□□ -0.28
LAMA4-220ENST00000523765 FZD9O00144 591 aa13.27□□□□□ -0.29
LAMA4-220ENST00000523765 CAMTA2O94983 1202 aa13.27□□□□□ -0.29
LAMA4-220ENST00000523765 EVX2Q03828 476 aa13.27□□□□□ -0.29
LAMA4-220ENST00000523765 CCDC93Q567U6 631 aa13.27□□□□□ -0.29
LAMA4-220ENST00000523765 VSIG10Q8N0Z9 540 aa13.27□□□□□ -0.29
LAMA4-220ENST00000523765 A1BGP04217 495 aa13.26□□□□□ -0.29
LAMA4-220ENST00000523765 EPS15P42566 896 aa13.26□□□□□ -0.29
LAMA4-220ENST00000523765 PIP4K2AP48426 406 aaPredicted RBP13.26□□□□□ -0.29
LAMA4-220ENST00000523765 PNMA8AQ86V59 439 aaPredicted RBP13.26□□□□□ -0.29
LAMA4-220ENST00000523765 ZNF496Q96IT1 587 aaPredicted RBP13.26□□□□□ -0.29
LAMA4-220ENST00000523765 A0A087WZG4 1122 aa13.25□□□□□ -0.29
LAMA4-220ENST00000523765 HMOX1P09601 288 aa13.25□□□□□ -0.29
LAMA4-220ENST00000523765 IARSP41252 1262 aaKnown RBP13.25□□□□□ -0.29
LAMA4-220ENST00000523765 SCNN1DP51172 638 aa13.25□□□□□ -0.29
LAMA4-220ENST00000523765 DGKZQ13574 1117 aa13.25□□□□□ -0.29
LAMA4-220ENST00000523765 MTHFSDQ2M296 383 aaKnown RBP13.25□□□□□ -0.29
LAMA4-220ENST00000523765 SOGA3Q5TF21 947 aa13.25□□□□□ -0.29
LAMA4-220ENST00000523765 SYNE4Q8N205 404 aa13.25□□□□□ -0.29
LAMA4-220ENST00000523765 ZIC5Q96T25 663 aa13.25□□□□□ -0.29
LAMA4-220ENST00000523765 SETDB2Q96T68 719 aa13.25□□□□□ -0.29
LAMA4-220ENST00000523765 POLR3GLQ9BT43 218 aa13.25□□□□□ -0.29
LAMA4-220ENST00000523765 BEGAINQ9BUH8 593 aa13.25□□□□□ -0.29
LAMA4-220ENST00000523765 GJA3Q9Y6H8 435 aa13.25□□□□□ -0.29
LAMA4-220ENST00000523765 TLL2Q9Y6L7 1015 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms