RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 FGFR3P22607 806 aa8.68□□□□□ -1.02
HMGB1P1-201ENST00000522557 FIGNL1Q6PIW4 674 aa8.68□□□□□ -1.02
HMGB1P1-201ENST00000522557 POTEAQ6S8J7 498 aa8.68□□□□□ -1.02
HMGB1P1-201ENST00000522557 FAM200AQ8TCP9 573 aa8.68□□□□□ -1.02
HMGB1P1-201ENST00000522557 PBXIP1Q96AQ6 731 aa8.68□□□□□ -1.02
HMGB1P1-201ENST00000522557 C2orf49Q9BVC5 232 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P1-201ENST00000522557 PHACTR1Q9C0D0 580 aa8.68□□□□□ -1.02
HMGB1P1-201ENST00000522557 CHMP3Q9Y3E7 222 aa8.68□□□□□ -1.02
HMGB1P1-201ENST00000522557 DCDC2BA2VCK2 349 aa8.67□□□□□ -1.02
HMGB1P1-201ENST00000522557 TNP2Q05952 138 aa8.67□□□□□ -1.02
HMGB1P1-201ENST00000522557 LRRC69Q6ZNQ3 347 aa8.67□□□□□ -1.02
HMGB1P1-201ENST00000522557 NOVA2Q9UNW9 492 aaKnown RBP8.67□□□□□ -1.02
HMGB1P1-201ENST00000522557 ADAMTS8Q9UP79 889 aa8.67□□□□□ -1.02
HMGB1P1-201ENST00000522557 KHNYNO15037 678 aaKnown RBP8.66□□□□□ -1.02
HMGB1P1-201ENST00000522557 MAPTP10636 758 aaKnown RBP8.66□□□□□ -1.02
HMGB1P1-201ENST00000522557 HIRAP54198 1017 aaPredicted RBP8.66□□□□□ -1.02
HMGB1P1-201ENST00000522557 RHPN1Q8TCX5 695 aa8.66□□□□□ -1.02
HMGB1P1-201ENST00000522557 NSFL1CQ9UNZ2 370 aaKnown RBP8.66□□□□□ -1.02
HMGB1P1-201ENST00000522557 BMP4P12644 408 aa8.65□□□□□ -1.02
HMGB1P1-201ENST00000522557 C1orf53Q5VUE5 145 aa8.65□□□□□ -1.02
HMGB1P1-201ENST00000522557 ALDH16A1Q8IZ83 802 aa8.65□□□□□ -1.02
HMGB1P1-201ENST00000522557 STAG2Q8N3U4 1231 aa8.65□□□□□ -1.02
HMGB1P1-201ENST00000522557 NGLY1Q96IV0 654 aa8.65□□□□□ -1.02
HMGB1P1-201ENST00000522557 NEUROD4Q9HD90 331 aa8.65□□□□□ -1.02
HMGB1P1-201ENST00000522557 ZMIZ1Q9ULJ6 1067 aa8.65□□□□□ -1.02
HMGB1P1-201ENST00000522557 CD33P20138 364 aa8.64□□□□□ -1.03
HMGB1P1-201ENST00000522557 IGFBP4P22692 258 aa8.64□□□□□ -1.03
HMGB1P1-201ENST00000522557 MAP2K3P46734 347 aa8.64□□□□□ -1.03
HMGB1P1-201ENST00000522557 ZNF280CQ8ND82 737 aa8.64□□□□□ -1.03
HMGB1P1-201ENST00000522557 HSH2DQ96JZ2 352 aa8.64□□□□□ -1.03
HMGB1P1-201ENST00000522557 STRN4Q9NRL3 753 aa8.64□□□□□ -1.03
HMGB1P1-201ENST00000522557 BCRP11274 1271 aa8.63□□□□□ -1.03
HMGB1P1-201ENST00000522557 WEE1P30291 646 aa8.63□□□□□ -1.03
HMGB1P1-201ENST00000522557 SAMD5Q5TGI4 173 aa8.63□□□□□ -1.03
HMGB1P1-201ENST00000522557 C1orf229Q6ZS94 237 aaPredicted RBP8.63□□□□□ -1.03
HMGB1P1-201ENST00000522557 STK32AQ8WU08 396 aa8.63□□□□□ -1.03
HMGB1P1-201ENST00000522557 OXCT2Q9BYC2 517 aaPredicted RBP8.63□□□□□ -1.03
HMGB1P1-201ENST00000522557 ATG7O95352 703 aa8.62□□□□□ -1.03
HMGB1P1-201ENST00000522557 FAM157BP0CG42 384 aa8.62□□□□□ -1.03
HMGB1P1-201ENST00000522557 MAP3K10Q02779 954 aa8.62□□□□□ -1.03
HMGB1P1-201ENST00000522557 ELOAQ14241 798 aaKnown RBP8.62□□□□□ -1.03
HMGB1P1-201ENST00000522557 GRIN2CQ14957 1233 aa8.62□□□□□ -1.03
HMGB1P1-201ENST00000522557 PRIMPOLQ96LW4 560 aa8.62□□□□□ -1.03
HMGB1P1-201ENST00000522557 USTQ9Y2C2 406 aa8.62□□□□□ -1.03
HMGB1P1-201ENST00000522557 GPC6Q9Y625 555 aaPredicted RBP8.62□□□□□ -1.03
HMGB1P1-201ENST00000522557 EFSO43281 561 aa8.61□□□□□ -1.03
HMGB1P1-201ENST00000522557 FAM69CQ0P6D2 419 aa8.61□□□□□ -1.03
HMGB1P1-201ENST00000522557 SUSD3Q96L08 255 aa8.61□□□□□ -1.03
HMGB1P1-201ENST00000522557 MARK1Q9P0L2 795 aa8.61□□□□□ -1.03
HMGB1P1-201ENST00000522557 SFSWAPQ12872 951 aaKnown RBP8.6□□□□□ -1.03
HMGB1P1-201ENST00000522557 ACIN1Q9UKV3 1341 aaKnown RBP8.59□□□□□ -1.03
HMGB1P1-201ENST00000522557 TMEM88BA6NKF7 163 aa8.59□□□□□ -1.03
HMGB1P1-201ENST00000522557 OIP5O43482 229 aa8.59□□□□□ -1.03
HMGB1P1-201ENST00000522557 PRMT3O60678 531 aa8.59□□□□□ -1.03
HMGB1P1-201ENST00000522557 FAM182BQ5T319 152 aa8.59□□□□□ -1.03
HMGB1P1-201ENST00000522557 KCTD17Q8N5Z5 321 aa8.59□□□□□ -1.03
HMGB1P1-201ENST00000522557 GALNT6Q8NCL4 622 aa8.59□□□□□ -1.03
HMGB1P1-201ENST00000522557 CEP63Q96MT8 703 aa8.59□□□□□ -1.03
HMGB1P1-201ENST00000522557 ANKIB1Q9P2G1 1089 aa8.59□□□□□ -1.03
HMGB1P1-201ENST00000522557 KLF15Q9UIH9 416 aa8.59□□□□□ -1.03
HMGB1P1-201ENST00000522557 GGA1Q9UJY5 639 aa8.59□□□□□ -1.03
HMGB1P1-201ENST00000522557 DNMT3AQ9Y6K1 912 aaPredicted RBP8.59□□□□□ -1.03
HMGB1P1-201ENST00000522557 MARSP56192 900 aaKnown RBP8.58□□□□□ -1.04
HMGB1P1-201ENST00000522557 TMEM164Q5U3C3 297 aa8.58□□□□□ -1.04
HMGB1P1-201ENST00000522557 ENAMQ9NRM1 1142 aa8.58□□□□□ -1.04
HMGB1P1-201ENST00000522557 NEURL1BA8MQ27 555 aa8.57□□□□□ -1.04
HMGB1P1-201ENST00000522557 SHISA8B8ZZ34 492 aa8.57□□□□□ -1.04
HMGB1P1-201ENST00000522557 FOXO3O43524 673 aa8.57□□□□□ -1.04
HMGB1P1-201ENST00000522557 LAMC2Q13753 1193 aa8.57□□□□□ -1.04
HMGB1P1-201ENST00000522557 RTN1Q16799 776 aa8.57□□□□□ -1.04
HMGB1P1-201ENST00000522557 SWI5Q1ZZU3 235 aa8.57□□□□□ -1.04
HMGB1P1-201ENST00000522557 NEDD1Q8NHV4 660 aa8.57□□□□□ -1.04
HMGB1P1-201ENST00000522557 EDARADDQ8WWZ3 215 aa8.57□□□□□ -1.04
HMGB1P1-201ENST00000522557 GDF2Q9UK05 429 aaPredicted RBP8.57□□□□□ -1.04
HMGB1P1-201ENST00000522557 PRR12Q9ULL5 1215 aa8.57□□□□□ -1.04
HMGB1P1-201ENST00000522557 BCS1LQ9Y276 419 aa8.57□□□□□ -1.04
HMGB1P1-201ENST00000522557 ARAFP10398 606 aa8.56□□□□□ -1.04
HMGB1P1-201ENST00000522557 PCBP4P57723 403 aaKnown RBP8.56□□□□□ -1.04
HMGB1P1-201ENST00000522557 FKBP5Q13451 457 aaPredicted RBP8.56□□□□□ -1.04
HMGB1P1-201ENST00000522557 OCLNQ16625 522 aa8.56□□□□□ -1.04
HMGB1P1-201ENST00000522557 GOLGA6L1Q8N7Z2 621 aa8.56□□□□□ -1.04
HMGB1P1-201ENST00000522557 VTI1AQ96AJ9 217 aa8.56□□□□□ -1.04
HMGB1P1-201ENST00000522557 QTRT2Q9H974 415 aaKnown RBP8.56□□□□□ -1.04
HMGB1P1-201ENST00000522557 BRD7Q9NPI1 651 aa8.56□□□□□ -1.04
HMGB1P1-201ENST00000522557 LRRC4BQ9NT99 713 aa8.56□□□□□ -1.04
HMGB1P1-201ENST00000522557 KLK14Q9P0G3 267 aa8.56□□□□□ -1.04
HMGB1P1-201ENST00000522557 GSK3AP49840 483 aa8.55□□□□□ -1.04
HMGB1P1-201ENST00000522557 TYRO3Q06418 890 aa8.55□□□□□ -1.04
HMGB1P1-201ENST00000522557 BTLAQ7Z6A9 289 aa8.55□□□□□ -1.04
HMGB1P1-201ENST00000522557 SLC30A3Q99726 388 aa8.55□□□□□ -1.04
HMGB1P1-201ENST00000522557 CNTNAP5Q8WYK1 1306 aa8.54□□□□□ -1.04
HMGB1P1-201ENST00000522557 SLAIN2Q9P270 581 aa8.54□□□□□ -1.04
HMGB1P1-201ENST00000522557 ZBTB7CA1YPR0 619 aa8.53□□□□□ -1.04
HMGB1P1-201ENST00000522557 KCNMA1Q12791 1236 aa8.53□□□□□ -1.04
HMGB1P1-201ENST00000522557 DGKZQ13574 1117 aa8.53□□□□□ -1.04
HMGB1P1-201ENST00000522557 ZNF468Q5VIY5 522 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P1-201ENST00000522557 SLCO4C1Q6ZQN7 724 aa8.53□□□□□ -1.04
HMGB1P1-201ENST00000522557 CAPN12Q6ZSI9 719 aa8.53□□□□□ -1.04
HMGB1P1-201ENST00000522557 FCHSD1Q86WN1 690 aa8.53□□□□□ -1.04
HMGB1P1-201ENST00000522557 DMGDHQ9UI17 866 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms