RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 KLRG2A4D1S0 409 aaPredicted RBP16.58■□□□□ 0.24
BRF2-204ENST00000522539 DDNO94850 711 aaPredicted RBP16.58■□□□□ 0.24
BRF2-204ENST00000522539 POTEIP0CG38 1075 aa16.58■□□□□ 0.24
BRF2-204ENST00000522539 POTEJP0CG39 1038 aa16.58■□□□□ 0.24
BRF2-204ENST00000522539 L3MBTL3Q96JM7 780 aaPredicted RBP16.58■□□□□ 0.24
BRF2-204ENST00000522539 ZNF219Q9P2Y4 722 aaPredicted RBP16.58■□□□□ 0.24
BRF2-204ENST00000522539 PASKQ96RG2 1323 aa16.57■□□□□ 0.24
BRF2-204ENST00000522539 KCNQ3O43525 872 aa16.57■□□□□ 0.24
BRF2-204ENST00000522539 CAPN15O75808 1086 aa16.57■□□□□ 0.24
BRF2-204ENST00000522539 ST5P78524 1137 aa16.57■□□□□ 0.24
BRF2-204ENST00000522539 CLEC4GQ6UXB4 293 aa16.57■□□□□ 0.24
BRF2-204ENST00000522539 ZNF330Q9Y3S2 320 aaPredicted RBP16.57■□□□□ 0.24
BRF2-204ENST00000522539 U2SURPO15042 1029 aaKnown RBP16.56■□□□□ 0.24
BRF2-204ENST00000522539 RGL2O15211 777 aa16.56■□□□□ 0.24
BRF2-204ENST00000522539 DZIP3Q86Y13 1208 aaKnown RBP16.56■□□□□ 0.24
BRF2-204ENST00000522539 SCN4AP35499 1836 aa16.55■□□□□ 0.24
BRF2-204ENST00000522539 BTBD11A6QL63 1104 aa16.55■□□□□ 0.24
BRF2-204ENST00000522539 PHACTR3Q96KR7 559 aa16.55■□□□□ 0.24
BRF2-204ENST00000522539 USP16Q9Y5T5 823 aa16.55■□□□□ 0.24
BRF2-204ENST00000522539 CNTNAP1P78357 1384 aa16.54■□□□□ 0.24
BRF2-204ENST00000522539 IQCA1LA6NCM1 817 aa16.54■□□□□ 0.24
BRF2-204ENST00000522539 LDHDQ86WU2 507 aa16.54■□□□□ 0.24
BRF2-204ENST00000522539 RSPH6AQ9H0K4 717 aa16.54■□□□□ 0.24
BRF2-204ENST00000522539 MKRN1Q9UHC7 482 aaKnown RBP16.54■□□□□ 0.24
BRF2-204ENST00000522539 CACNA1SQ13698 1873 aa16.53■□□□□ 0.24
BRF2-204ENST00000522539 NPM2Q86SE8 214 aaKnown RBP16.53■□□□□ 0.24
BRF2-204ENST00000522539 TAF1DQ9H5J8 278 aaPredicted RBP16.53■□□□□ 0.24
BRF2-204ENST00000522539 ADAMTSL1Q8N6G6 1762 aa16.52■□□□□ 0.24
BRF2-204ENST00000522539 PRAMEF22A3QJZ6 481 aa16.52■□□□□ 0.24
BRF2-204ENST00000522539 ITGBL1O95965 494 aaPredicted RBP16.52■□□□□ 0.24
BRF2-204ENST00000522539 NPR1P16066 1061 aa16.52■□□□□ 0.24
BRF2-204ENST00000522539 PRKAR2BP31323 418 aa16.52■□□□□ 0.24
BRF2-204ENST00000522539 CCDC93Q567U6 631 aa16.52■□□□□ 0.24
BRF2-204ENST00000522539 NBPF5PQ86XG9 351 aaPredicted RBP16.52■□□□□ 0.24
BRF2-204ENST00000522539 NPHP1O15259 732 aa16.51■□□□□ 0.23
BRF2-204ENST00000522539 SNRPA1P09661 255 aaKnown RBP16.51■□□□□ 0.23
BRF2-204ENST00000522539 PIP4K2AP48426 406 aaPredicted RBP16.51■□□□□ 0.23
BRF2-204ENST00000522539 FKBP4Q02790 459 aaKnown RBP eCLIP16.51■□□□□ 0.23
BRF2-204ENST00000522539 ZNF652Q9Y2D9 606 aa16.51■□□□□ 0.23
BRF2-204ENST00000522539 SNED1Q8TER0 1413 aa16.51■□□□□ 0.23
BRF2-204ENST00000522539 NBPF26B4DH59 902 aa16.5■□□□□ 0.23
BRF2-204ENST00000522539 NBPF10Q6P3W6 841 aaKnown RBP16.5■□□□□ 0.23
BRF2-204ENST00000522539 NBPF15Q8N660 670 aa16.5■□□□□ 0.23
BRF2-204ENST00000522539 CCER1Q8TC90 406 aaPredicted RBP16.5■□□□□ 0.23
BRF2-204ENST00000522539 PRDM10Q9NQV6 1147 aa16.5■□□□□ 0.23
BRF2-204ENST00000522539 ZNF541Q9H0D2 1346 aa16.49■□□□□ 0.23
BRF2-204ENST00000522539 FOXN1O15353 648 aa16.49■□□□□ 0.23
BRF2-204ENST00000522539 TPTE2Q6XPS3 522 aa16.49■□□□□ 0.23
BRF2-204ENST00000522539 TMEM88BA6NKF7 163 aa16.48■□□□□ 0.23
BRF2-204ENST00000522539 FZD9O00144 591 aa16.48■□□□□ 0.23
BRF2-204ENST00000522539 RTKN2Q8IZC4 609 aa16.48■□□□□ 0.23
BRF2-204ENST00000522539 ZNF277Q9NRM2 450 aaPredicted RBP16.48■□□□□ 0.23
BRF2-204ENST00000522539 HTATSF1O43719 755 aaKnown RBP16.47■□□□□ 0.23
BRF2-204ENST00000522539 VEGFBP49765 207 aa16.47■□□□□ 0.23
BRF2-204ENST00000522539 OLFM4Q6UX06 510 aa16.47■□□□□ 0.23
BRF2-204ENST00000522539 HACL1Q9UJ83 578 aa16.47■□□□□ 0.23
BRF2-204ENST00000522539 NIP7Q9Y221 180 aaKnown RBP eCLIP16.47■□□□□ 0.23
BRF2-204ENST00000522539 EPHX2P34913 555 aa16.46■□□□□ 0.23
BRF2-204ENST00000522539 CRY2Q49AN0 593 aa16.46■□□□□ 0.23
BRF2-204ENST00000522539 MCM10Q7L590 875 aa16.46■□□□□ 0.23
BRF2-204ENST00000522539 RASSF10A6NK89 507 aa16.45■□□□□ 0.22
BRF2-204ENST00000522539 ALDH1B1P30837 517 aa16.45■□□□□ 0.22
BRF2-204ENST00000522539 HLFQ16534 295 aa16.45■□□□□ 0.22
BRF2-204ENST00000522539 PNMA8AQ86V59 439 aaPredicted RBP16.45■□□□□ 0.22
BRF2-204ENST00000522539 RTF1Q92541 710 aaKnown RBP16.45■□□□□ 0.22
BRF2-204ENST00000522539 CFAP53Q96M91 514 aa16.45■□□□□ 0.22
BRF2-204ENST00000522539 PSMD1Q99460 953 aa16.45■□□□□ 0.22
BRF2-204ENST00000522539 WBP1LQ9NX94 342 aa16.45■□□□□ 0.22
BRF2-204ENST00000522539 IARSP41252 1262 aaKnown RBP16.44■□□□□ 0.22
BRF2-204ENST00000522539 CTCFP49711 727 aaPredicted RBP16.44■□□□□ 0.22
BRF2-204ENST00000522539 GPC2Q8N158 579 aa16.44■□□□□ 0.22
BRF2-204ENST00000522539 SYNE4Q8N205 404 aa16.44■□□□□ 0.22
BRF2-204ENST00000522539 NUDCQ9Y266 331 aa16.44■□□□□ 0.22
BRF2-204ENST00000522539 EAPPQ56P03 285 aaPredicted RBP16.43■□□□□ 0.22
BRF2-204ENST00000522539 RIC1Q4ADV7 1423 aa16.43■□□□□ 0.22
BRF2-204ENST00000522539 RNF123Q5XPI4 1314 aa16.43■□□□□ 0.22
BRF2-204ENST00000522539 ABCC12Q96J65 1359 aa16.42■□□□□ 0.22
BRF2-204ENST00000522539 LAMB4A4D0S4 1761 aa16.42■□□□□ 0.22
BRF2-204ENST00000522539 DCTN1Q14203 1278 aa16.42■□□□□ 0.22
BRF2-204ENST00000522539 CNTROBQ8N137 903 aa16.42■□□□□ 0.22
BRF2-204ENST00000522539 COL4A5P29400 1685 aa16.42■□□□□ 0.22
BRF2-204ENST00000522539 IBTKQ9P2D0 1353 aaPredicted RBP16.41■□□□□ 0.22
BRF2-204ENST00000522539 ERVV-1B6SEH8 477 aa16.41■□□□□ 0.22
BRF2-204ENST00000522539 U2AF1L5P0DN76 240 aaPredicted RBP16.41■□□□□ 0.22
BRF2-204ENST00000522539 HOXA10P31260 410 aaPredicted RBP16.41■□□□□ 0.22
BRF2-204ENST00000522539 U2AF1Q01081 240 aaKnown RBP eCLIP16.41■□□□□ 0.22
BRF2-204ENST00000522539 CNGB1Q14028 1251 aaPredicted RBP16.41■□□□□ 0.22
BRF2-204ENST00000522539 TAF7Q15545 349 aaPredicted RBP16.41■□□□□ 0.22
BRF2-204ENST00000522539 CC2D2BQ6DHV5 1058 aa16.41■□□□□ 0.22
BRF2-204ENST00000522539 AIDAQ96BJ3 306 aa16.41■□□□□ 0.22
BRF2-204ENST00000522539 LTBP1Q14766 1721 aa16.4■□□□□ 0.22
BRF2-204ENST00000522539 PPP2R1AP30153 589 aa16.4■□□□□ 0.22
BRF2-204ENST00000522539 MAP1SQ66K74 1059 aaPredicted RBP16.4■□□□□ 0.22
BRF2-204ENST00000522539 CLEC11AQ9Y240 323 aa16.4■□□□□ 0.22
BRF2-204ENST00000522539 THSD7BQ9C0I4 1608 aa16.39■□□□□ 0.21
BRF2-204ENST00000522539 FAM177BA6PVY3 158 aa16.39■□□□□ 0.21
BRF2-204ENST00000522539 ZEB1P37275 1124 aaPredicted RBP16.39■□□□□ 0.21
BRF2-204ENST00000522539 DEFB115Q30KQ5 88 aa16.39■□□□□ 0.21
BRF2-204ENST00000522539 GRIPAP1Q4V328 841 aa16.39■□□□□ 0.21
BRF2-204ENST00000522539 JDP2Q8WYK2 163 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms