RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 CSB-PGBD3P0DP91 1061 aa11.35□□□□□ -0.59
PVT1-213ENST00000522414 NME9Q86XW9 330 aa11.35□□□□□ -0.59
PVT1-213ENST00000522414 MARCH10Q8NA82 808 aaPredicted RBP11.35□□□□□ -0.59
PVT1-213ENST00000522414 TSHZ2Q9NRE2 1034 aa11.35□□□□□ -0.59
PVT1-213ENST00000522414 GMPR2Q9P2T1 348 aaKnown RBP11.35□□□□□ -0.59
PVT1-213ENST00000522414 WNK3Q9BYP7 1800 aa11.35□□□□□ -0.59
PVT1-213ENST00000522414 WDR17Q8IZU2 1322 aa11.35□□□□□ -0.59
PVT1-213ENST00000522414 TTC21AQ8NDW8 1320 aa11.35□□□□□ -0.59
PVT1-213ENST00000522414 RPIAP49247 311 aa11.34□□□□□ -0.59
PVT1-213ENST00000522414 THAP11Q96EK4 314 aa11.34□□□□□ -0.59
PVT1-213ENST00000522414 FCF1Q9Y324 198 aaKnown RBP11.34□□□□□ -0.59
PVT1-213ENST00000522414 METTL3Q86U44 580 aaKnown RBP11.33□□□□□ -0.6
PVT1-213ENST00000522414 CARD10Q9BWT7 1032 aa11.33□□□□□ -0.6
PVT1-213ENST00000522414 LRP5O75197 1615 aa11.33□□□□□ -0.6
PVT1-213ENST00000522414 NFAT5O94916 1531 aa11.33□□□□□ -0.6
PVT1-213ENST00000522414 CD163L1Q9NR16 1453 aa11.32□□□□□ -0.6
PVT1-213ENST00000522414 PEAK1Q9H792 1746 aa11.32□□□□□ -0.6
PVT1-213ENST00000522414 TONSLQ96HA7 1378 aa11.32□□□□□ -0.6
PVT1-213ENST00000522414 ST20-MTHFSA0A0A6YYL1 179 aa11.32□□□□□ -0.6
PVT1-213ENST00000522414 EXOC5O00471 708 aa11.32□□□□□ -0.6
PVT1-213ENST00000522414 OATP04181 439 aa11.32□□□□□ -0.6
PVT1-213ENST00000522414 MORN1Q5T089 497 aa11.32□□□□□ -0.6
PVT1-213ENST00000522414 NBPF14Q5TI25 921 aa11.32□□□□□ -0.6
PVT1-213ENST00000522414 FAM160A2Q8N612 972 aaPredicted RBP11.32□□□□□ -0.6
PVT1-213ENST00000522414 RGPD3A6NKT7 1758 aaPredicted RBP11.31□□□□□ -0.6
PVT1-213ENST00000522414 RGPD4Q7Z3J3 1758 aa11.31□□□□□ -0.6
PVT1-213ENST00000522414 RREB1Q92766 1687 aa11.31□□□□□ -0.6
PVT1-213ENST00000522414 FBLN1P23142 703 aa11.31□□□□□ -0.6
PVT1-213ENST00000522414 HDGFL2Q7Z4V5 671 aaPredicted RBP11.31□□□□□ -0.6
PVT1-213ENST00000522414 AXIN1O15169 862 aa11.3□□□□□ -0.6
PVT1-213ENST00000522414 KCNQ2O43526 872 aa11.3□□□□□ -0.6
PVT1-213ENST00000522414 TESK2Q96S53 571 aa11.3□□□□□ -0.6
PVT1-213ENST00000522414 CDCA7Q9BWT1 371 aaPredicted RBP11.3□□□□□ -0.6
PVT1-213ENST00000522414 NLRP2Q9NX02 1062 aa11.3□□□□□ -0.6
PVT1-213ENST00000522414 LRRC37A3O60309 1634 aa11.3□□□□□ -0.6
PVT1-213ENST00000522414 C11orf95C9JLR9 678 aaPredicted RBP11.29□□□□□ -0.6
PVT1-213ENST00000522414 SEMA3EO15041 775 aa11.29□□□□□ -0.6
PVT1-213ENST00000522414 PLSCR1O15162 318 aa11.29□□□□□ -0.6
PVT1-213ENST00000522414 WFS1O76024 890 aa11.29□□□□□ -0.6
PVT1-213ENST00000522414 FUT2Q10981 343 aa11.29□□□□□ -0.6
PVT1-213ENST00000522414 TRIM26Q12899 539 aaPredicted RBP11.29□□□□□ -0.6
PVT1-213ENST00000522414 PDGFDQ9GZP0 370 aaPredicted RBP11.29□□□□□ -0.6
PVT1-213ENST00000522414 PRDM9Q9NQV7 894 aa11.29□□□□□ -0.6
PVT1-213ENST00000522414 TERF2IPQ9NYB0 399 aa11.29□□□□□ -0.6
PVT1-213ENST00000522414 USP31Q70CQ4 1352 aa11.28□□□□□ -0.6
PVT1-213ENST00000522414 PARD3Q8TEW0 1356 aa11.28□□□□□ -0.6
PVT1-213ENST00000522414 RGPD5Q99666 1765 aa11.28□□□□□ -0.6
PVT1-213ENST00000522414 NFX1Q12986 1120 aaKnown RBP11.28□□□□□ -0.6
PVT1-213ENST00000522414 CYP4X1Q8N118 509 aa11.28□□□□□ -0.6
PVT1-213ENST00000522414 ANKRD24Q8TF21 1146 aa11.28□□□□□ -0.6
PVT1-213ENST00000522414 LTV1Q96GA3 475 aaPredicted RBP11.28□□□□□ -0.6
PVT1-213ENST00000522414 PUS7Q96PZ0 661 aaKnown RBP11.28□□□□□ -0.6
PVT1-213ENST00000522414 OVOS2A0A0G2JMS6 1433 aa11.27□□□□□ -0.6
PVT1-213ENST00000522414 OVOS2A0A0J9YW53 1432 aa11.27□□□□□ -0.6
PVT1-213ENST00000522414 BCL9O00512 1426 aa11.27□□□□□ -0.6
PVT1-213ENST00000522414 OVOS2Q6IE36 1432 aa11.27□□□□□ -0.6
PVT1-213ENST00000522414 CD2BP2O95400 341 aaKnown RBP11.27□□□□□ -0.61
PVT1-213ENST00000522414 FECHP22830 423 aa11.27□□□□□ -0.61
PVT1-213ENST00000522414 ACSBG1Q96GR2 724 aa11.27□□□□□ -0.61
PVT1-213ENST00000522414 SLC27A5Q9Y2P5 690 aa11.27□□□□□ -0.61
PVT1-213ENST00000522414 SBF2Q86WG5 1849 aa11.27□□□□□ -0.61
PVT1-213ENST00000522414 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
PVT1-213ENST00000522414 LCE2CQ5TA81 110 aa11.26□□□□□ -0.61
PVT1-213ENST00000522414 NLRP7Q8WX94 980 aa11.26□□□□□ -0.61
PVT1-213ENST00000522414 A0A1W2PP64 1363 aa11.26□□□□□ -0.61
PVT1-213ENST00000522414 NUP188Q5SRE5 1749 aa11.26□□□□□ -0.61
PVT1-213ENST00000522414 TXNRD1Q16881 649 aa11.25□□□□□ -0.61
PVT1-213ENST00000522414 IP6K1Q92551 441 aa11.25□□□□□ -0.61
PVT1-213ENST00000522414 NINLQ9Y2I6 1382 aa11.25□□□□□ -0.61
PVT1-213ENST00000522414 UTRNP46939 3433 aa11.25□□□□□ -0.61
PVT1-213ENST00000522414 IL2RBP14784 551 aa11.24□□□□□ -0.61
PVT1-213ENST00000522414 HIC1Q14526 733 aa11.24□□□□□ -0.61
PVT1-213ENST00000522414 CTC1Q2NKJ3 1217 aa11.24□□□□□ -0.61
PVT1-213ENST00000522414 RDH13Q8NBN7 331 aa11.24□□□□□ -0.61
PVT1-213ENST00000522414 DDX54Q8TDD1 881 aaKnown RBP11.24□□□□□ -0.61
PVT1-213ENST00000522414 SPON1Q9HCB6 807 aa11.24□□□□□ -0.61
PVT1-213ENST00000522414 RTN4Q9NQC3 1192 aaKnown RBP11.24□□□□□ -0.61
PVT1-213ENST00000522414 CCDC7Q96M83 1385 aa11.24□□□□□ -0.61
PVT1-213ENST00000522414 EDC4Q6P2E9 1401 aaKnown RBP11.24□□□□□ -0.61
PVT1-213ENST00000522414 LTN1O94822 1766 aa11.23□□□□□ -0.61
PVT1-213ENST00000522414 COG3Q96JB2 828 aa11.23□□□□□ -0.61
PVT1-213ENST00000522414 DAXXQ9UER7 740 aaPredicted RBP11.23□□□□□ -0.61
PVT1-213ENST00000522414 FYB1O15117 783 aa11.22□□□□□ -0.61
PVT1-213ENST00000522414 ZBTB7AO95365 584 aa11.22□□□□□ -0.61
PVT1-213ENST00000522414 FMNL1O95466 1100 aaPredicted RBP11.22□□□□□ -0.61
PVT1-213ENST00000522414 ATP6V1AP38606 617 aa11.22□□□□□ -0.61
PVT1-213ENST00000522414 MAP3K19Q56UN5 1328 aa11.22□□□□□ -0.61
PVT1-213ENST00000522414 BRICD5Q6PL45 260 aa11.22□□□□□ -0.61
PVT1-213ENST00000522414 GGNBP2Q9H3C7 697 aa11.22□□□□□ -0.61
PVT1-213ENST00000522414 PPP1R1BQ9UD71 204 aaPredicted RBP11.22□□□□□ -0.61
PVT1-213ENST00000522414 KAT6BQ8WYB5 2073 aa11.21□□□□□ -0.61
PVT1-213ENST00000522414 FAM208AQ9UK61 1670 aaKnown RBP11.21□□□□□ -0.61
PVT1-213ENST00000522414 DDX11L8A8MPP1 907 aa11.21□□□□□ -0.61
PVT1-213ENST00000522414 AMPHP49418 695 aa11.21□□□□□ -0.61
PVT1-213ENST00000522414 RRS1Q15050 365 aaKnown RBP11.21□□□□□ -0.61
PVT1-213ENST00000522414 PCGF6Q9BYE7 350 aa11.21□□□□□ -0.61
PVT1-213ENST00000522414 WIPF1O43516 503 aa11.2□□□□□ -0.62
PVT1-213ENST00000522414 SLC24A1O60721 1099 aa11.2□□□□□ -0.62
PVT1-213ENST00000522414 SMPD1P17405 629 aa11.2□□□□□ -0.62
PVT1-213ENST00000522414 HOXC9P31274 260 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms